mRNA_H-elongata_contig78408.15510.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig78408.15510.1 vs. uniprot
Match: A0A6H5JP45_9PHAE (BPL/LPL catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP45_9PHAE) HSP 1 Score: 177 bits (448), Expect = 3.650e-53 Identity = 84/114 (73.68%), Postives = 98/114 (85.96%), Query Frame = 1
Query: 1 MLLNDRSPSERPPTVVLGISGKPEKMCDLDLIRRDKVPLIKRFSGGGTVIVDGNTIFASIIVNDADVPECKPFPREIMDWSMGVYGPAFASIASKKPGAQLGLRENDYVFGNLK 342
++LN+ P E PTVVLGISGKPEKMC+L+L+ RDK+PLIKRFSGGGTVI+DGNTIF S+I+N ADVPECKPFPREIMDWS G+YGPAF S+ K P +LGLRENDYVF +LK
Sbjct: 34 LVLNEGHP-EAQPTVVLGISGKPEKMCNLELVERDKIPLIKRFSGGGTVIIDGNTIFTSLIMNQADVPECKPFPREIMDWSKGIYGPAFRSVVIK-PELELGLRENDYVFDDLK 145
BLAST of mRNA_H-elongata_contig78408.15510.1 vs. uniprot
Match: A0A836CA98_9STRA (Biotin/lipoate A/B protein ligase family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA98_9STRA) HSP 1 Score: 156 bits (394), Expect = 5.020e-45 Identity = 70/109 (64.22%), Postives = 91/109 (83.49%), Query Frame = 1
Query: 22 PSERPPTVVLGISGKPEKMCDLDLIRRDKVPLIKRFSGGGTVIVDGNTIFASIIVNDADVPECKPFPREIMDWSMGVYGPAFASIASKKPGA--QLGLRENDYVFGNLK 342
P PPTVVLGISGKPE+MC+L+L+++D +PL++RFSGGGTVIVD +TIF S+IVN DVP +P+PRE+M+WS G++GPA A++A G+ QLGLRENDYVFG+LK
Sbjct: 47 PPSDPPTVVLGISGKPERMCNLELVQQDGIPLVRRFSGGGTVIVDSDTIFTSLIVNQTDVPHVQPYPREVMEWSKGIFGPALAALAPPSGGSAVQLGLRENDYVFGDLK 155
BLAST of mRNA_H-elongata_contig78408.15510.1 vs. uniprot
Match: A0A067CJJ7_SAPPC (BPL/LPL catalytic domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJJ7_SAPPC) HSP 1 Score: 123 bits (309), Expect = 1.220e-32 Identity = 57/102 (55.88%), Postives = 74/102 (72.55%), Query Frame = 1
Query: 37 PTVVLGISGKPEKMCDLDLIRRDKVPLIKRFSGGGTVIVDGNTIFASIIVNDADVPECKPFPREIMDWSMGVYGPAFASIASKKPGAQLGLRENDYVFGNLK 342
P +V+GISGKPEK+ D++ + RDKVP+IKRFSGGGTV++D NT+F + IVN + P+ KP+PREIMDWS + P F I K LRE+DYVFG+ K
Sbjct: 47 PKIVMGISGKPEKLLDVEAVARDKVPVIKRFSGGGTVVIDDNTLFTTFIVNTSAKPQVKPYPREIMDWSSTFFTPLFDDIT--KHTESFALREDDYVFGDRK 146
BLAST of mRNA_H-elongata_contig78408.15510.1 vs. uniprot
Match: A0A6G0WAS9_9STRA (BPL/LPL catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAS9_9STRA) HSP 1 Score: 122 bits (305), Expect = 4.830e-32 Identity = 55/100 (55.00%), Postives = 74/100 (74.00%), Query Frame = 1
Query: 43 VVLGISGKPEKMCDLDLIRRDKVPLIKRFSGGGTVIVDGNTIFASIIVNDADVPECKPFPREIMDWSMGVYGPAFASIASKKPGAQLGLRENDYVFGNLK 342
+V+GISGKPEK+ D+D ++RDK+ ++KRFSGGGTV+VD NTIF + I+N + VP +PFPR IM+WS + P F SI + + LRE+DYVFGN K
Sbjct: 49 IVMGISGKPEKLLDVDAVKRDKIAVLKRFSGGGTVVVDNNTIFTTFIINTSAVPHVQPFPRNIMEWSESFFTPLFGSINGCRE--KFELREDDYVFGNRK 146
BLAST of mRNA_H-elongata_contig78408.15510.1 vs. uniprot
Match: A0A024TNK3_9STRA (BPL/LPL catalytic domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TNK3_9STRA) HSP 1 Score: 120 bits (301), Expect = 2.650e-31 Identity = 56/115 (48.70%), Postives = 80/115 (69.57%), Query Frame = 1
Query: 10 NDRSPSERPPTVVLGISGKPEKMCDLDLIRRDKVPLIKRFSGGGTVIVDGNTIFASIIVNDADVPECKPFPREIMDWSMGVYGPAFASIA----SKKPGAQLGLRENDYVFGNLK 342
N+R+ S +V+GISGKPE++ D+D + RDK+P+IKRFSGGGTV+VD +T+F + ++N + +P+ KP+PREIM+WS Y P F S+ S LRE+DYVFG+ K
Sbjct: 41 NERTKSTN---IVMGISGKPERLLDVDAVARDKIPVIKRFSGGGTVVVDNSTVFTTFVINTSALPQVKPYPREIMEWSSTFYTPLFQSLLGGPRSTSHPPTFALREDDYVFGDRK 152
BLAST of mRNA_H-elongata_contig78408.15510.1 vs. uniprot
Match: A0A484E666_BRELC (BPL/LPL catalytic domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E666_BRELC) HSP 1 Score: 119 bits (299), Expect = 4.010e-31 Identity = 59/113 (52.21%), Postives = 76/113 (67.26%), Query Frame = 1
Query: 4 LLNDRSPSERPPTVVLGISGKPEKMCDLDLIRRDKVPLIKRFSGGGTVIVDGNTIFASIIVNDADVPECKPFPREIMDWSMGVYGPAFASIASKKPGAQLGLRENDYVFGNLK 342
L ND+S P T+V+GISGKPE++ LD ++R +P++KRFSGGGTVIVD +TIF + I D P KPFPREIM+WS + P F+ I K+ Q LRENDYV + K
Sbjct: 41 LYNDKS---SPATIVMGISGKPEQLLHLDAVKRVNIPVLKRFSGGGTVIVDHDTIFTTFICKHEDFPHVKPFPREIMEWSQTFFRPLFSRICHKE--TQFSLRENDYVLNDRK 148
BLAST of mRNA_H-elongata_contig78408.15510.1 vs. uniprot
Match: A0A1V9YPU3_9STRA (BPL/LPL catalytic domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPU3_9STRA) HSP 1 Score: 119 bits (297), Expect = 7.440e-31 Identity = 54/102 (52.94%), Postives = 71/102 (69.61%), Query Frame = 1
Query: 37 PTVVLGISGKPEKMCDLDLIRRDKVPLIKRFSGGGTVIVDGNTIFASIIVNDADVPECKPFPREIMDWSMGVYGPAFASIASKKPGAQLGLRENDYVFGNLK 342
P +V+GISGKPEK+ D++ + RDK+P++KRFSGGGTV++D NT+F + IVN P KP+PREIMDWS + P F I LRE+DYVFG+ K
Sbjct: 46 PKIVMGISGKPEKLLDVEAVGRDKIPIVKRFSGGGTVVIDDNTLFTTFIVNTEAKPLVKPYPREIMDWSATFFTPLFDDITQHTEA--FALREDDYVFGDRK 145
BLAST of mRNA_H-elongata_contig78408.15510.1 vs. uniprot
Match: A0A485KLW0_9STRA (Aste57867_8927 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLW0_9STRA) HSP 1 Score: 119 bits (298), Expect = 8.330e-31 Identity = 58/111 (52.25%), Postives = 76/111 (68.47%), Query Frame = 1
Query: 10 NDRSPSERPPTVVLGISGKPEKMCDLDLIRRDKVPLIKRFSGGGTVIVDGNTIFASIIVNDADVPECKPFPREIMDWSMGVYGPAFASIASKKPGAQLGLRENDYVFGNLK 342
N+R+ S +V+GISGKP K+ D+D + RD +P+IKRFSGGGTV+VD +T+F + IVN +P KPFPREIM+WS Y P F S+ Q LRE+DYVFG+ K
Sbjct: 57 NERTQSTN---IVMGISGKPAKLLDVDAVARDNIPIIKRFSGGGTVVVDDSTLFTTFIVNTNALPHVKPFPREIMEWSSTFYTPLFGSLTGTNEVFQ--LREDDYVFGDRK 162
BLAST of mRNA_H-elongata_contig78408.15510.1 vs. uniprot
Match: W4GK19_9STRA (BPL/LPL catalytic domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GK19_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.230e-30 Identity = 50/100 (50.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query: 43 VVLGISGKPEKMCDLDLIRRDKVPLIKRFSGGGTVIVDGNTIFASIIVNDADVPECKPFPREIMDWSMGVYGPAFASIASKKPGAQLGLRENDYVFGNLK 342
+V+GISGKPE++ D+D + R+K+P+IKRFSGGGTV+VD +T+F + ++N + +P KPFPR+IM+WS Y P F S+ LRE+DYV G+ K
Sbjct: 50 IVMGISGKPERLLDVDAVVRNKIPVIKRFSGGGTVVVDDSTVFTTFVINTSALPHVKPFPRDIMEWSSTFYTPLFRSLLESSSQDTFALREDDYVLGDRK 149
BLAST of mRNA_H-elongata_contig78408.15510.1 vs. uniprot
Match: A0A3M6VAF7_9STRA (BPL/LPL catalytic domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VAF7_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.240e-30 Identity = 54/103 (52.43%), Postives = 73/103 (70.87%), Query Frame = 1
Query: 34 PPTVVLGISGKPEKMCDLDLIRRDKVPLIKRFSGGGTVIVDGNTIFASIIVNDADVPECKPFPREIMDWSMGVYGPAFASIASKKPGAQLGLRENDYVFGNLK 342
P T+V+GISGKP+++ + ++RDK+P++KRFSGGGTVIVD NTIF + I D P+ KPFPR+IM WS V+ P F+ I K + LRE+DYVF + K
Sbjct: 48 PATIVMGISGKPDQLLHQNAVKRDKIPVLKRFSGGGTVIVDHNTIFTTFICKQKDFPKVKPFPRDIMTWSQQVFAPFFSRICHKD--LKFSLREDDYVFNDRK 148 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78408.15510.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig78408.15510.1 >prot_H-elongata_contig78408.15510.1 ID=prot_H-elongata_contig78408.15510.1|Name=mRNA_H-elongata_contig78408.15510.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp MLLNDRSPSERPPTVVLGISGKPEKMCDLDLIRRDKVPLIKRFSGGGTVIback to top mRNA from alignment at H-elongata_contig78408:107..2567+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig78408.15510.1 ID=mRNA_H-elongata_contig78408.15510.1|Name=mRNA_H-elongata_contig78408.15510.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2461bp|location=Sequence derived from alignment at H-elongata_contig78408:107..2567+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig78408:107..2567+ >mRNA_H-elongata_contig78408.15510.1 ID=mRNA_H-elongata_contig78408.15510.1|Name=mRNA_H-elongata_contig78408.15510.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=684bp|location=Sequence derived from alignment at H-elongata_contig78408:107..2567+ (Himanthalia elongata Himel1 dioecious)back to top |