prot_H-elongata_contig7835.15504.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7835.15504.1
Unique Nameprot_H-elongata_contig7835.15504.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length47
Homology
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BLAST of mRNA_H-elongata_contig7835.15504.1 vs. uniprot
Match: A0A6H5KSF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF1_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.260e-17
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0 
Query:    3 RIQFLLKLCWAITMYKSQGQTLSKAVIDLGKKEACTGLTFVCLSH 47
            R Q  L+LCWAITM+KSQGQTL+KAVIDLG KEACTGLTFVCLS 
Sbjct:   15 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSR 59
[Close]
BLAST of mRNA_H-elongata_contig7835.15504.1 vs. uniprot
Match: A0A6H5KFN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN2_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 2.850e-17
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0 
Query:    3 RIQFLLKLCWAITMYKSQGQTLSKAVIDLGKKEACTGLTFVCLSH 47
            R Q  L+LCWAITM+KSQGQTL+KAVIDLG KEACTGLTFVCLS 
Sbjct:   13 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSR 57
[Close]
BLAST of mRNA_H-elongata_contig7835.15504.1 vs. uniprot
Match: A0A6H5KCP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP5_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 5.430e-17
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0 
Query:    3 RIQFLLKLCWAITMYKSQGQTLSKAVIDLGKKEACTGLTFVCLSH 47
            R Q  L+LCWAITM+KSQGQTL+KAVIDLG KEACTGLTFVCLS 
Sbjct:   13 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSR 57
[Close]
BLAST of mRNA_H-elongata_contig7835.15504.1 vs. uniprot
Match: A0A6H5JMH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH2_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 5.540e-17
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0 
Query:    3 RIQFLLKLCWAITMYKSQGQTLSKAVIDLGKKEACTGLTFVCLSH 47
            R Q  L+LCWAITM+KSQGQTL+KAVIDLG KEACTGLTFVCLS 
Sbjct:   79 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSR 123
[Close]
BLAST of mRNA_H-elongata_contig7835.15504.1 vs. uniprot
Match: A0A6H5K214_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K214_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 9.260e-17
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0 
Query:    3 RIQFLLKLCWAITMYKSQGQTLSKAVIDLGKKEACTGLTFVCLSH 47
            R Q  L+LCWAITM+KSQGQTL+KAVIDLG KEACTGLTFVCLS 
Sbjct:   10 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSR 54
[Close]
BLAST of mRNA_H-elongata_contig7835.15504.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 3.120e-16
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0 
Query:    3 RIQFLLKLCWAITMYKSQGQTLSKAVIDLGKKEACTGLTFVCLSH 47
            R Q  L+LCWAITM+KSQGQTL+KAVIDLG KEACTGLTFVCLS 
Sbjct:  186 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSR 230
[Close]
BLAST of mRNA_H-elongata_contig7835.15504.1 vs. uniprot
Match: A0A6H5KN08_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN08_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 3.470e-16
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0 
Query:    3 RIQFLLKLCWAITMYKSQGQTLSKAVIDLGKKEACTGLTFVCLSH 47
            R Q  L+LCWAITM+KSQGQTL+KAVIDLG KEACTGLTFVCLS 
Sbjct:   13 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSR 57
[Close]
BLAST of mRNA_H-elongata_contig7835.15504.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 7.710e-16
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0 
Query:    3 RIQFLLKLCWAITMYKSQGQTLSKAVIDLGKKEACTGLTFVCLSH 47
            R Q  L+LCWAITM+KSQGQTL+KAVIDLG KEACTGLTFVCLS 
Sbjct:  360 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSR 404
[Close]
BLAST of mRNA_H-elongata_contig7835.15504.1 vs. uniprot
Match: A0A6H5K4U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U7_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 7.850e-16
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0 
Query:    3 RIQFLLKLCWAITMYKSQGQTLSKAVIDLGKKEACTGLTFVCLSH 47
            R Q  L+LCWAITM+KSQGQTL+KAVIDLG KEACTGLTFVCLS 
Sbjct:   77 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSR 121
[Close]
BLAST of mRNA_H-elongata_contig7835.15504.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 8.040e-16
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0 
Query:    3 RIQFLLKLCWAITMYKSQGQTLSKAVIDLGKKEACTGLTFVCLSH 47
            R Q  L+LCWAITM+KSQGQTL+KAVIDLG KEACTGLTFVCLS 
Sbjct: 1491 RTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSR 1535
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7835.15504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSF1_9PHAE1.260e-1782.22Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFN2_9PHAE2.850e-1782.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCP5_9PHAE5.430e-1782.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMH2_9PHAE5.540e-1782.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K214_9PHAE9.260e-1782.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUS2_9PHAE3.120e-1682.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN08_9PHAE3.470e-1682.22Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JFG8_9PHAE7.710e-1682.22Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K4U7_9PHAE7.850e-1682.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L976_9PHAE8.040e-1682.22ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..47
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.474

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7835contigH-elongata_contig7835:9356..9496 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7835.15504.1mRNA_H-elongata_contig7835.15504.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7835 9011..9496 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7835.15504.1 ID=prot_H-elongata_contig7835.15504.1|Name=mRNA_H-elongata_contig7835.15504.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=47bp
MTRIQFLLKLCWAITMYKSQGQTLSKAVIDLGKKEACTGLTFVCLSH
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