mRNA_H-elongata_contig78340.15503.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig78340.15503.1 vs. uniprot
Match: D8LRQ2_ECTSI (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ2_ECTSI) HSP 1 Score: 259 bits (662), Expect = 1.770e-81 Identity = 139/201 (69.15%), Postives = 161/201 (80.10%), Query Frame = 1
Query: 1 MTSTARVALASWVVLGSSAFYSEAFVA-LPPLFSSAATAFGTRASHAPASPGSGC-RRLSALRMADGSPKKIVITGVGSLSSVGIGSDNHYKALLDGTNGIETLPEWADEYPCKVGCLVKDFTPSDWMEGKDAKRQGRYTQFAMAATKLALKDSKLDTEAVNKDRFGVLIGSGIGGVEFFEDNCGKFNKAGGKAAGLKKAS 597
M +T + LA W L A +EAFV + PL ++ TRA ++ ++ SG RR SAL M++G+ KKIVITGVGSLSSVGIG+D+HY+ALLDG NGIETLPEWA+EYPCK+GCLVKDF PSDWM+GKDAKRQGRYTQFAMAATKLAL+DSKLDTEAV+KDRFGVLIGSGIGGVEFFE+NC KF AG A GLKK S
Sbjct: 1 MAATPKACLAVWAAL---AIQAEAFVPPVNPLSAARPAGVDTRAVYSSSAVSSGSSRRESALYMSEGAKKKIVITGVGSLSSVGIGADSHYQALLDGKNGIETLPEWAEEYPCKIGCLVKDFKPSDWMDGKDAKRQGRYTQFAMAATKLALEDSKLDTEAVDKDRFGVLIGSGIGGVEFFENNCNKFTAAGAGAKGLKKVS 198
BLAST of mRNA_H-elongata_contig78340.15503.1 vs. uniprot
Match: A0A7S0M182_9CRYP (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M182_9CRYP) HSP 1 Score: 184 bits (467), Expect = 1.420e-52 Identity = 93/149 (62.42%), Postives = 115/149 (77.18%), Query Frame = 1
Query: 169 LSALRMADGSP--KKIVITGVGSLSSVGIGSDNHYKALLDGTNGIETLPEWADEYPCKVGCLVKDFT----PSDWMEGKDAKRQGRYTQFAMAATKLALKDSKLDTEAVNKDRFGVLIGSGIGGVEFFEDNCGKFNKAGGKAAGLKKAS 597
LS+L MAD KK+VITGVG++SSVGIG+ + ++AL+DG +GI +P WADEYPC+VG LV + P D+M+ K+A+RQGRYT FAMAA K+AL+D KLD V+KDR GV+IGSGIGGVEFFEDNC KF AGG A+GLKK S
Sbjct: 37 LSSLSMADQMQVKKKVVITGVGAVSSVGIGAQSFFQALVDGKSGIIKMPSWADEYPCRVGSLVSESVGWNGPEDYMDKKEARRQGRYTHFAMAAAKIALEDGKLDVTKVDKDRLGVIIGSGIGGVEFFEDNCNKFTAAGGGASGLKKVS 185
BLAST of mRNA_H-elongata_contig78340.15503.1 vs. uniprot
Match: A0A836CDS1_9STRA (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDS1_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.080e-50 Identity = 82/132 (62.12%), Postives = 108/132 (81.82%), Query Frame = 1
Query: 205 KIVITGVGSLSSVGIGSDNHYKALLDGTNGIETLPEWADEYPCKVGCLVK-DFTPSDWMEGKDAKRQGRYTQFAMAATKLALKDSKLDTEAVNKDRFGVLIGSGIGGVEFFEDNCGKFNKAGGKAAGLKKAS 597
KIV+TGVGS+S+VG G+D H++ LL G +G++ +P WADEYP +VG LV F P++WM+ ++++RQGRYT FAMAA+K+A++D+KLD A++ D+FGVLIGSGIGGVEFFEDNC KF AGG AGLKK S
Sbjct: 49 KIVVTGVGSVSAVGWGADAHFQKLLAGESGLKKMPSWADEYPAQVGALVDPSFDPAEWMDKRESRRQGRYTHFAMAASKMAIEDAKLDVTAIDSDKFGVLIGSGIGGVEFFEDNCNKFTAAGGNGAGLKKVS 180
BLAST of mRNA_H-elongata_contig78340.15503.1 vs. uniprot
Match: A0A6U1MH54_9STRA (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MH54_9STRA) HSP 1 Score: 161 bits (408), Expect = 5.930e-44 Identity = 77/145 (53.10%), Postives = 105/145 (72.41%), Query Frame = 1
Query: 166 RLSALRMADGSPKK-IVITGVGSLSSVGIGSDNHYKALLDGTNGIETLPEWADEYPCKVGCLVKDFTPSDWMEGKDAKRQGRYTQFAMAATKLALKDSKLDTEAVNKDRFGVLIGSGIGGVEFFEDNCGKFNKAGGKAAGLKKAS 597
R S+L+M++ PKK +V+TG+G +SSVG G+ Y + DG +GI+ LP WADE+P K+G V DF DWM+ +DAKRQ R+T FAMA + A++D+KLDT+ ++ +FGVLIGSG+GGVE FE+N K+ AGG AG KK S
Sbjct: 38 RSSSLQMSETLPKKKVVVTGLGVVSSVGTGAQEFYDNICDGVSGIQRLPSWADEFPTKIGAPVNDFNAGDWMDKRDAKRQARFTHFAMACARQAVEDAKLDTDKLDPFKFGVLIGSGVGGVEIFENNLNKYTAAGGGYAGWKKVS 182
BLAST of mRNA_H-elongata_contig78340.15503.1 vs. uniprot
Match: A0A7S1XSM4_9STRA (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSM4_9STRA) HSP 1 Score: 156 bits (395), Expect = 3.950e-42 Identity = 78/146 (53.42%), Postives = 108/146 (73.97%), Query Frame = 1
Query: 175 ALRMAD---GSPKKIVITGVGSLSSVGIGSDNHYKALLDGTNGIETLPEWADEYPCKVGCLVKD--FTPSDWMEGKDAKRQGRYTQFAMAATKLALKDSKLDTEAVNKDRFGVLIGSGIGGVEFFEDNCGKFNKAGGKAAGLKKAS 597
A+RM+ G PK IV+TG+G++SS G+G+ + L DG + + LPEWADEYP +VG +V D F DWM K+A+RQ RYT FA+AA+++AL+D+K+D EAV K++FGVLIGSGIGG+E+FED+C F++ G AGLK+ S
Sbjct: 26 AVRMSSENYGGPK-IVVTGLGTVSSAGVGAHVMFDNLCDGKSALHRLPEWADEYPAQVGSMVSDDDFNVRDWMHPKEARRQARYTHFAIAASRMALEDAKVDLEAVEKEKFGVLIGSGIGGIEYFEDSCVGFHEENGGRAGLKRVS 170
BLAST of mRNA_H-elongata_contig78340.15503.1 vs. uniprot
Match: A0A7S1DVF7_HEMAN (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DVF7_HEMAN) HSP 1 Score: 152 bits (385), Expect = 1.710e-40 Identity = 82/154 (53.25%), Postives = 107/154 (69.48%), Query Frame = 1
Query: 166 RLSALRMA--DGSPKK-IVITGVGSLSSVGIGSDNHYKALLDGTNGIETLPEWADEYPCKVGCLVKDFT----PSDWMEGKDAKRQGRYTQFAMAATKLALKDSKLD-TEAVNKDRFGVLIGSGIGGVEFFEDNCGKFNKAGGKAAGLKKASFL 603
R +A+RMA + PKK +V+TGVG++S+VG GSD ++ + G +GI LP+WADEYPC + LV + T P ++M+ KDAKRQGRYTQFAMAA K+A++D+ LD T+ KDRFGVLIGSG G EF E+NC KF +G GL S L
Sbjct: 44 RHTAVRMAAEETQPKKKVVVTGVGAVSAVGCGSDTFFQNAVAGKSGIARLPKWADEYPCNIAALVSEDTGWKGPEEYMDAKDAKRQGRYTQFAMAAAKMAVEDASLDVTKIKEKDRFGVLIGSGTGAAEFLEENCNKFFASGEGKEGLDAVSPL 197
BLAST of mRNA_H-elongata_contig78340.15503.1 vs. uniprot
Match: A0A7S4PIL2_GUITH (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PIL2_GUITH) HSP 1 Score: 146 bits (369), Expect = 4.890e-38 Identity = 72/142 (50.70%), Postives = 101/142 (71.13%), Query Frame = 1
Query: 184 MADGSPKKIVITGVGSLSSVGIGSDNHYKALLDGTNGIETLPEWADEYPCKVGCLVKDFT----PSDWMEGKDAKRQGRYTQFAMAATKLALKDSKLDTEAVNKDRFGVLIGSGIGGVEFFEDNCGKFNKAGGKAAGLKKAS 597
MA+ S KK+VITGVG++S VG+G+D + AL++G +GI LP+ DE+PC+VG +V + P D+M+ K AK QGR+ F+MAA K+A+ D+K+D V+K RFG +IGSG GGVEFFEDN K+ A G A G+++ S
Sbjct: 77 MAEASRKKVVITGVGAVSPVGVGADKFFNALVEGKSGIVRLPKAFDEFPCQVGAVVGEEAGWHGPEDYMDSKMAKTQGRFVHFSMAAAKMAIDDAKMDVTKVDKSRFGCIIGSGTGGVEFFEDNVNKYFSAQGGAKGMQEVS 218
BLAST of mRNA_H-elongata_contig78340.15503.1 vs. uniprot
Match: A0A7S0STP5_9STRA (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STP5_9STRA) HSP 1 Score: 133 bits (335), Expect = 2.010e-33 Identity = 66/131 (50.38%), Postives = 91/131 (69.47%), Query Frame = 1
Query: 196 SPKKIVITGVGSLSSVGIGSDNHYKALLDGTNGIETLPEWADEYPCKVGCLVKDFTPSDWMEGKDAKRQGRYTQFAMAATKLALKDSKLDTEAVNKDRFGVLIGSGIGGVEFFEDNCGKFNKAGGKAAGLK 588
S KKIVITG+GS++ VGIG++ Y+AL+ G +GI LP WADE+P K L+ ++ ++GK R GRYT FA+ A K A+ D+KLD + ++K+RFG +IGSGIGGVE+FE+ C F A G GL+
Sbjct: 37 SKKKIVITGLGSVTPVGIGAEATYQALIAGKSGIVRLPSWADEFPSKSAGLINFDPKANGLKGKTINRNGRYTHFALVAAKEAIADAKLDLDKIDKNRFGCIIGSGIGGVEWFENMCNGFTAAKGGYNGLR 167
BLAST of mRNA_H-elongata_contig78340.15503.1 vs. uniprot
Match: A0A7S0ECD4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0ECD4_9CRYP) HSP 1 Score: 126 bits (316), Expect = 1.140e-32 Identity = 64/132 (48.48%), Postives = 90/132 (68.18%), Query Frame = 1
Query: 178 LRMAD--GSPKKIVITGVGSLSSVGIGSDNHYKALLDGTNGIETLPEWADEYPCKVGCLVKDFTPSDWMEGK-DAKRQGRYTQFAMAATKLALKDSKLDTEAV-NKDRFGVLIGSGIGGVEFFEDNCGKFNK 561
LRMA G ++V+TGVG +S VG G D ++++ ++LP WA+++PCKV +V DF DW + K +AKRQ RY Q +AA+KLA++D+KLDT+AV +KD+FGV I S IGG EFFE+ K+ K
Sbjct: 12 LRMAAAAGGKPRVVVTGVGIVSPVGTGGDKFFESMFAEKTNFQSLPSWAEQFPCKVAGVVSDFKAEDWYKNKKEAKRQSRYMQMGIAASKLAVQDAKLDTDAVADKDKFGVFIASAIGGSEFFEEAGSKWQK 143
BLAST of mRNA_H-elongata_contig78340.15503.1 vs. uniprot
Match: A0A845QVC4_9CLOT (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=2 Tax=Senegalia massiliensis TaxID=1720316 RepID=A0A845QVC4_9CLOT) HSP 1 Score: 127 bits (318), Expect = 2.940e-31 Identity = 56/124 (45.16%), Postives = 95/124 (76.61%), Query Frame = 1
Query: 205 KIVITGVGSLSSVGIGSDNHYKALLDGTNGIETLPEW-ADEYPCKVGCLVKDFTPSDWMEGKDAKRQGRYTQFAMAATKLALKDSKLDTEAVNKDRFGVLIGSGIGGVEFFEDNCGKFNKAGGK 573
++VITG+G +S +GIG D +++L++G +G++ + ++ ++YP K+ VKDF P ++++ KDAKR RY+QFA+AA+K+A++DSK++ ++++K+RFGV++GSGIGG+E FE K K G K
Sbjct: 4 RVVITGIGVISPIGIGKDTFWESLINGKSGVDYITKFDTEDYPTKIAAEVKDFDPVNYIDKKDAKRMDRYSQFAVAASKIAIQDSKINLDSIDKERFGVILGSGIGGIETFETQNEKLIKKGPK 127 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78340.15503.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig78340.15503.1 >prot_H-elongata_contig78340.15503.1 ID=prot_H-elongata_contig78340.15503.1|Name=mRNA_H-elongata_contig78340.15503.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=202bp MTSTARVALASWVVLGSSAFYSEAFVALPPLFSSAATAFGTRASHAPASPback to top mRNA from alignment at H-elongata_contig78340:750..2705- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig78340.15503.1 ID=mRNA_H-elongata_contig78340.15503.1|Name=mRNA_H-elongata_contig78340.15503.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1956bp|location=Sequence derived from alignment at H-elongata_contig78340:750..2705- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig78340:750..2705- >mRNA_H-elongata_contig78340.15503.1 ID=mRNA_H-elongata_contig78340.15503.1|Name=mRNA_H-elongata_contig78340.15503.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1212bp|location=Sequence derived from alignment at H-elongata_contig78340:750..2705- (Himanthalia elongata Himel1 dioecious)back to top |