prot_H-elongata_contig78340.15502.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig78340.15502.1
Unique Name	prot_H-elongata_contig78340.15502.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	60

Homology

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BLAST of mRNA_H-elongata_contig78340.15502.1 vs. uniprot
Match: D8LRQ2_ECTSI (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ2_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 1.560e-24
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0

Query:    1 VSPFLIPALISNTASGVVAIEHKARGPNFGVVSACATGTHAIGTAMDLMLRGE 53
            VSPFLIPALISNTASGVVAIEHK RGPNFGVVSACATGTHAIGTAMD MLRGE
Sbjct:  197 VSPFLIPALISNTASGVVAIEHKCRGPNFGVVSACATGTHAIGTAMDFMLRGE 249

[Close]

BLAST of mRNA_H-elongata_contig78340.15502.1 vs. uniprot
Match: A0A836CDS1_9STRA (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDS1_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 3.530e-23
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0

Query:    1 VSPFLIPALISNTASGVVAIEHKARGPNFGVVSACATGTHAIGTAMDLMLRGE 53
            VSPFLIPALISNTASGVVAI+ KARGPNFGVVSACATGTHAIGTAMD MLRGE
Sbjct:  179 VSPFLIPALISNTASGVVAIDLKARGPNFGVVSACATGTHAIGTAMDFMLRGE 231

[Close]

BLAST of mRNA_H-elongata_contig78340.15502.1 vs. uniprot
Match: A0A7S1XSM4_9STRA (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSM4_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.890e-19
Identity = 43/53 (81.13%), Postives = 48/53 (90.57%), Query Frame = 0

Query:    1 VSPFLIPALISNTASGVVAIEHKARGPNFGVVSACATGTHAIGTAMDLMLRGE 53
            VSPFLIPALISNTASG+VAI+  A GPNFGVVSACATGTHA+GTA+D + RGE
Sbjct:  169 VSPFLIPALISNTASGIVAIDVGAEGPNFGVVSACATGTHALGTALDFLKRGE 221

[Close]

BLAST of mRNA_H-elongata_contig78340.15502.1 vs. uniprot
Match: A0A2E6TGB4_9BACT (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A2E6TGB4_9BACT)

HSP 1 Score: 82.0 bits (201), Expect = 6.880e-17
Identity = 38/53 (71.70%), Postives = 46/53 (86.79%), Query Frame = 0

Query:    1 VSPFLIPALISNTASGVVAIEHKARGPNFGVVSACATGTHAIGTAMDLMLRGE 53
            VSPF+IP+LI+N A GV+AIE+ ARGPNFGVVSACATGTHAIG ++ +M  GE
Sbjct:  127 VSPFMIPSLIANIAGGVIAIEYGARGPNFGVVSACATGTHAIGESLRIMTNGE 179

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BLAST of mRNA_H-elongata_contig78340.15502.1 vs. uniprot
Match: A0A7S0M182_9CRYP (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M182_9CRYP)

HSP 1 Score: 81.3 bits (199), Expect = 1.510e-16
Identity = 39/53 (73.58%), Postives = 46/53 (86.79%), Query Frame = 0

Query:    1 VSPFLIPALISNTASGVVAIEHKARGPNFGVVSACATGTHAIGTAMDLMLRGE 53
            VSPFLIPALISNTASG+VAIE  A+GPN+GVVSACATG+HAIG A+  +  G+
Sbjct:  184 VSPFLIPALISNTASGIVAIEIGAKGPNYGVVSACATGSHAIGDALSFLQTGQ 236

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BLAST of mRNA_H-elongata_contig78340.15502.1 vs. uniprot
Match: UPI00198A0267 (Beta-ketoacyl-ACP synthase II n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI00198A0267)

HSP 1 Score: 79.7 bits (195), Expect = 4.740e-16
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 0

Query:    1 VSPFLIPALISNTASGVVAIEHKARGPNFGVVSACATGTHAIGTAMDLMLRGE 53
            VSPF IPALI N  SG+VAIE  ARGPNFG+VSACATGTHAIG +M ++ RG+
Sbjct:  134 VSPFTIPALIGNICSGIVAIELGARGPNFGIVSACATGTHAIGESMHMIRRGD 186

[Close]

BLAST of mRNA_H-elongata_contig78340.15502.1 vs. uniprot
Match: A0A426CJR5_9BACT (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=4 Tax=Opitutaceae TaxID=134623 RepID=A0A426CJR5_9BACT)

HSP 1 Score: 79.0 bits (193), Expect = 8.960e-16
Identity = 38/54 (70.37%), Postives = 45/54 (83.33%), Query Frame = 0

Query:    1 VSPFLIPALISNTASGVVAIEHKARGPNFGVVSACATGTHAIGTAMDLMLRGEV 54
            VSPF IPALI N  SG+VAI+  ARGPNFG+VSACATGTHA+G AM ++ RG+V
Sbjct:  134 VSPFAIPALIGNMCSGMVAIDIGARGPNFGLVSACATGTHALGEAMHMVRRGDV 187

[Close]

BLAST of mRNA_H-elongata_contig78340.15502.1 vs. uniprot
Match: A0A2V2RXM6_9BACT (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V2RXM6_9BACT)

HSP 1 Score: 79.0 bits (193), Expect = 9.010e-16
Identity = 35/53 (66.04%), Postives = 46/53 (86.79%), Query Frame = 0

Query:    1 VSPFLIPALISNTASGVVAIEHKARGPNFGVVSACATGTHAIGTAMDLMLRGE 53
            VSPF+IP+LI+N ASG+VAIE  A+GPNF VVSACATG+HA+G A+D + +G+
Sbjct:  135 VSPFMIPSLIANIASGIVAIEFNAKGPNFSVVSACATGSHALGEALDFLRKGD 187

[Close]

BLAST of mRNA_H-elongata_contig78340.15502.1 vs. uniprot
Match: A0A8J2S636_9STRA (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S636_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.290e-15
Identity = 39/53 (73.58%), Postives = 43/53 (81.13%), Query Frame = 0

Query:    1 VSPFLIPALISNTASGVVAIEHKARGPNFGVVSACATGTHAIGTAMDLMLRGE 53
            VSPF IPAL+ NTASGVV IE   RGPNFGVVSACA+GTHAIG AM  + RG+
Sbjct:  152 VSPFAIPALLGNTASGVVGIELNCRGPNFGVVSACASGTHAIGEAMLAIQRGD 204

[Close]

BLAST of mRNA_H-elongata_contig78340.15502.1 vs. uniprot
Match: A0A0E3UIQ1_9BACT (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Verrucomicrobia bacterium IMCC26134 TaxID=1637999 RepID=A0A0E3UIQ1_9BACT)

HSP 1 Score: 78.2 bits (191), Expect = 1.690e-15
Identity = 38/53 (71.70%), Postives = 43/53 (81.13%), Query Frame = 0

Query:    1 VSPFLIPALISNTASGVVAIEHKARGPNFGVVSACATGTHAIGTAMDLMLRGE 53
            VSPF IPALI N  SG+ AIE  ARGPNFG+VSACATGTHAIG AM ++ RG+
Sbjct:  134 VSPFTIPALIGNICSGMFAIEIGARGPNFGIVSACATGTHAIGEAMHMIKRGD 186

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig78340.15502.1 vs. uniprot

BLAST of mRNA_H-elongata_contig78340.15502.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LRQ2_ECTSI	1.560e-24	96.23	Beta-ketoacyl-[acyl-carrier-protein] synthase I n=...	[more]
A0A836CDS1_9STRA	3.530e-23	94.34	Beta-ketoacyl-[acyl-carrier-protein] synthase I n=...	[more]
A0A7S1XSM4_9STRA	1.890e-19	81.13	3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=...	[more]
A0A2E6TGB4_9BACT	6.880e-17	71.70	3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Ta...	[more]
A0A7S0M182_9CRYP	1.510e-16	73.58	Beta-ketoacyl-[acyl-carrier-protein] synthase I n=...	[more]
UPI00198A0267	4.740e-16	71.70	Beta-ketoacyl-ACP synthase II n=1 Tax=Burkholderia...	[more]
A0A426CJR5_9BACT	8.960e-16	70.37	3-oxoacyl-[acyl-carrier-protein] synthase 2 n=4 Ta...	[more]
A0A2V2RXM6_9BACT	9.010e-16	66.04	3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Ta...	[more]
A0A8J2S636_9STRA	1.290e-15	73.58	3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=...	[more]
A0A0E3UIQ1_9BACT	1.690e-15	71.70	3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016039	Thiolase-like	GENE3D	3.40.47.10		coord: 1..57 e-value: 1.8E-13 score: 52.8
IPR016039	Thiolase-like	SUPERFAMILY	53901	Thiolase-like	coord: 1..55
IPR014030	Beta-ketoacyl synthase, N-terminal	PFAM	PF00109	ketoacyl-synt	coord: 2..54 e-value: 6.7E-10 score: 39.0
None	No IPR available	PANTHER	PTHR11712:SF297	3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE, MITOCHONDRIAL	coord: 1..55
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 29..50
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 51..59
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 12..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..11
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..28
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
IPR000794	Beta-ketoacyl synthase	PANTHER	PTHR11712	POLYKETIDE SYNTHASE-RELATED	coord: 1..55
IPR018201	Beta-ketoacyl synthase, active site	PROSITE	PS00606	B_KETOACYL_SYNTHASE	coord: 26..42

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig78340	contig	H-elongata_contig78340:251..430 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig78340.15502.1	mRNA_H-elongata_contig78340.15502.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig78340 251..430 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig78340.15502.1 ID=prot_H-elongata_contig78340.15502.1|Name=mRNA_H-elongata_contig78340.15502.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=60bp
VSPFLIPALISNTASGVVAIEHKARGPNFGVVSACATGTHAIGTAMDLML
RGEVRLRYR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016039	Thiolase-like
IPR014030	Ketoacyl_synth_N
IPR000794	Beta-ketoacyl_synthase
IPR018201	Ketoacyl_synth_AS