prot_H-elongata_contig7829.15497.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7829.15497.1
Unique Nameprot_H-elongata_contig7829.15497.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length915
Homology
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BLAST of mRNA_H-elongata_contig7829.15497.1 vs. uniprot
Match: D7FRB3_ECTSI (Ubiquitin carboxyl-terminal hydrolase 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRB3_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 2.140e-67
Identity = 121/199 (60.80%), Postives = 146/199 (73.37%), Query Frame = 0 
Query:  675 KNPLNRLVEPPPRIKKGEGRGELAVDLYECLDHFTAEEALIADNGNGYDCERCKARTISSSPAMIG----KNKGIAWETKQDARKRLLMLGKPPGVLVCHLKRLQAKRKITKSVLFDLDLDMSPYFWQDPQAPLTPKEAHYSLFGLVEHRGNRLGGHYVAYIRDKDGWKHASDSAVRPSTLKEVQGCEAYMLFYERCDL 869
            +NPL+RL EP  R K         +DLY CLDHF AEE L+A +GNGY CE C +R         G    K K  A  + Q+ARKRLLMLG+PPGVLVCHLKRLQAK+KI +SV F ++LDM+PYFW DP APL+P +  Y L GLV+HRG+RLGGHY+AY+RD+DGWKHASDSA+R +TL E++ CEAYMLFYE CDL
Sbjct:  796 RNPLDRLQEPSARKKLERRHDPDGIDLYGCLDHFMAEEKLVAADGNGYHCESCSSREEXXXXXXXGEGGVKAKEGATRSHQNARKRLLMLGQPPGVLVCHLKRLQAKKKIIRSVEFPIELDMTPYFWLDPDAPLSPTQTRYCLSGLVQHRGSRLGGHYIAYVRDRDGWKHASDSAIRTATLPEIKACEAYMLFYECCDL 994
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BLAST of mRNA_H-elongata_contig7829.15497.1 vs. uniprot
Match: A0A6H5JSL1_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL1_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 4.250e-66
Identity = 119/199 (59.80%), Postives = 146/199 (73.37%), Query Frame = 0 
Query:  675 KNPLNRLVEPPPRIKKGEGRGELAVDLYECLDHFTAEEALIADNGNGYDCERCKARTISSSPAMIG----KNKGIAWETKQDARKRLLMLGKPPGVLVCHLKRLQAKRKITKSVLFDLDLDMSPYFWQDPQAPLTPKEAHYSLFGLVEHRGNRLGGHYVAYIRDKDGWKHASDSAVRPSTLKEVQGCEAYMLFYERCDL 869
            ++PL+RL EP  R K         +DLY CLDHF AEE L+A +GNGY CE C +R  + + A  G    K K  A  + Q+ARKRLLMLG+PPGVLVCHLKRLQAK+KI + V F ++LDM+PYFW DP APL+P    Y L GLV+HRG+R GGHY+AY+RD+DGWKHASDS +R +TL E++ CEAYMLFYERCDL
Sbjct: 1048 RDPLDRLQEPSARKKLERRHDPDGIDLYGCLDHFMAEEELVAADGNGYHCESCSSREEAVAAATGGEGGVKAKEGATRSHQNARKRLLMLGQPPGVLVCHLKRLQAKKKIIRRVEFPIELDMTPYFWLDPDAPLSPNHTRYCLSGLVQHRGSRFGGHYIAYVRDRDGWKHASDSDIRTATLPEIKACEAYMLFYERCDL 1246
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BLAST of mRNA_H-elongata_contig7829.15497.1 vs. uniprot
Match: A0A836C8Y3_9STRA (USP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Y3_9STRA)

HSP 1 Score: 117 bits (292), Expect = 3.990e-23
Identity = 75/182 (41.21%), Postives = 95/182 (52.20%), Query Frame = 0 
Query:  672 VDVKNPLNRLVEPPPRIKKGEGRGELA-------VDLYECLDHFTAEEALIADNGNGYDCERC----------KARTISSSPAMIGKNKGIAWETKQDARKRLLMLGKPPGVLVCHLKRLQAKRKITKSVLFDLDLDMSPYFWQDP---QAPLTPKEAHYSLFGLVEHRGNRLGGHYVAYIR 833
            VD  +P+ R +E PP    G+G    A       VDL  CL  FT  E L A  G+GY C +C          +A T  S+ + + ++   A  T+ DA+KRLL+L +PP VLVCHLKRL+  RK    V     LD SPY W+DP    A        Y L+ +VEHRG   GGHYVAY R
Sbjct:  504 VDPNDPMLRRLEAPPLPPLGDGAAVAAGGAQAGAVDLAACLAAFTRTEELSAAAGDGYACAKCCQKGAKGRPARAWTRRSASSFMPRSAKGAPRTRADAQKRLLIL-RPPRVLVCHLKRLRPHRKSPLHVRAPEILDASPYCWRDPASASADAPRDRCLYLLYAVVEHRGGARGGHYVAYTR 684
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BLAST of mRNA_H-elongata_contig7829.15497.1 vs. uniprot
Match: UPI00193CA165 (ubiquitin carboxyl-terminal hydrolase 16 n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193CA165)

HSP 1 Score: 104 bits (260), Expect = 4.150e-19
Identity = 72/201 (35.82%), Postives = 103/201 (51.24%), Query Frame = 0 
Query:  686 PRIKKGEGRGELAVDLYECLDHFTAEEALIADNGNGYDCERCKARTISSSPAMIGKNKGIAWETKQ---DARKRLLMLGKPPGVLVCHLKRLQAK----RKITKSVLFDLDLDMSPYFWQDPQAPLTPKEAH--YSLFGLVEHRGNRLGGHYVAYIRDKDG-----------WKHASDSAVRPSTLKEVQGCEAYMLFYER 866
            PR +  EG       +  CL+HFTA E +  +N  G  C+ C  R           NKG   + K    ++ KRLL + KPP +L+ HLKR Q +    RK++  V F L LD++P+  +  +  L   +    YSL+G+VEH G   GGHYVAY++ ++G           W + SDS V P   + V   +AY+LFYER
Sbjct:  987 PRYQCEEGE----CSVLSCLNHFTAIEMMAGNNKAG--CDMCTKR----------HNKGKEKDAKTVYTNSTKRLL-ISKPPPILILHLKRFQVQMRSFRKLSCHVTFPLVLDIAPFCSKSCEKLLEKGQTQLLYSLYGVVEHSGTLHGGHYVAYVKVREGEQKPNQPREGSWYYISDSHVSPVKEEAVLRTQAYLLFYER 1170
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BLAST of mRNA_H-elongata_contig7829.15497.1 vs. uniprot
Match: A0A482XSJ3_LAOST (Ubiquitinyl hydrolase 1 n=1 Tax=Laodelphax striatellus TaxID=195883 RepID=A0A482XSJ3_LAOST)

HSP 1 Score: 104 bits (259), Expect = 5.460e-19
Identity = 72/201 (35.82%), Postives = 103/201 (51.24%), Query Frame = 0 
Query:  686 PRIKKGEGRGELAVDLYECLDHFTAEEALIADNGNGYDCERCKARTISSSPAMIGKNKGIAWETKQ---DARKRLLMLGKPPGVLVCHLKRLQAK----RKITKSVLFDLDLDMSPYFWQDPQAPLTPKEAH--YSLFGLVEHRGNRLGGHYVAYIRDKDG-----------WKHASDSAVRPSTLKEVQGCEAYMLFYER 866
            PR +  EG       +  CL+HFTA E +  +N  G  C+ C  R          +NKG   + K    ++ KRLL + KPP +L+ HLKR Q +    RK++  V F L LD++P+  +  +  L   +    YSL+G+VEH G   GGHYVAY++ ++G           W   SDS V P   + V   +AY+LFYER
Sbjct:  987 PRYQCEEGE----CSVLSCLNHFTAIEMMAGNNKAG--CDMCTKR----------QNKGKEKDAKTVYTNSTKRLL-ISKPPPILILHLKRFQVQMRSFRKLSCHVTFPLVLDIAPFCSKSCENLLEKGQTQLLYSLYGVVEHSGTLHGGHYVAYVKVREGEQKPNQPREGSWYFISDSRVSPVKEEAVLRTQAYLLFYER 1170
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BLAST of mRNA_H-elongata_contig7829.15497.1 vs. uniprot
Match: G3PDE1_GASAC (Ubiquitin carboxyl-terminal hydrolase 16 n=3 Tax=Gasterosteidae TaxID=69291 RepID=G3PDE1_GASAC)

HSP 1 Score: 97.4 bits (241), Expect = 5.800e-17
Identity = 63/192 (32.81%), Postives = 91/192 (47.40%), Query Frame = 0 
Query:  701 LYECLDHFTAEEALIADNGNGYDCERCKARTISSSPAMIGKNKGIAWETKQDARKRLLMLGKPPGVLVCHLKRLQAKR----KITKSVLFDLDLDMSPY-FWQDPQAPLTPKEAHYSLFGLVEHRGNRLGGHYVAYIRDKD---------------------GWKHASDSAVRPSTLKEVQGCEAYMLFYER 866
            +  CL HFT  E L  +N     C  C    + S+   +G + G       DA K++L +  PP VL  HLKR Q       K+ + V F L LD++P+   +         +  YSL+G+VEH G    GHY AY++ +                       W H SD++V+P +  +VQGC+AY+LFYER
Sbjct:  640 VQSCLFHFTEVETLTQNNS--LLCVTCTK--VQSNKEKVGGS-GSKKNVYTDALKQML-ISSPPPVLTLHLKRFQQNGYSICKVNRHVSFPLILDLAPFCVVKCENLTEVDSQVLYSLYGIVEHSGTMRSGHYTAYVKARSECHKPSSNGFIAEGREAPPRGSWFHVSDTSVQPVSESKVQGCQAYLLFYER 825
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BLAST of mRNA_H-elongata_contig7829.15497.1 vs. uniprot
Match: A0A672FX85_SALFA (Ubiquitinyl hydrolase 1 n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672FX85_SALFA)

HSP 1 Score: 96.7 bits (239), Expect = 7.180e-17
Identity = 65/189 (34.39%), Postives = 88/189 (46.56%), Query Frame = 0 
Query:  701 LYECLDHFTAEEALIADNGNGYDCERCKARTISSSPAMIGKNKGIAWETKQDARKRLLMLGKPPGVLVCHLKRLQAKR----KITKSVLFDLDLDMSPYF---WQDPQAPLTPKEAHYSLFGLVEHRGNRLGGHYVAYIRDK----------------DGWKHASDSAVRPSTLKEVQGCEAYMLFYER 866
            +  CL  FT  E L     N   C  C  R      A   KN         DA K++L +  PP VL  HLKR Q       K+ + V F L LD++P+     +D     T  +  YSL+G+VEH G    GHY AY++ +                  W H SD++V+P +  +VQGC+AY+LFYER
Sbjct:  460 VQSCLFQFTEVETL--SQNNSLLCVTCTKRHRKDGKAAESKN------VYTDALKQML-ISSPPPVLTLHLKRFQQSGYSICKVNRHVQFPLVLDLAPFCAVKCKDTAEEDT--QVLYSLYGIVEHSGTMRSGHYTAYVKVRPDCPKPSSNGIAAEGGSSWFHISDTSVQPVSESKVQGCQAYLLFYER 637
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BLAST of mRNA_H-elongata_contig7829.15497.1 vs. uniprot
Match: A0A6I9PHW0_9TELE (Ubiquitin carboxyl-terminal hydrolase 16 n=8 Tax=Notothenioidei TaxID=8205 RepID=A0A6I9PHW0_9TELE)

HSP 1 Score: 95.5 bits (236), Expect = 2.370e-16
Identity = 65/190 (34.21%), Postives = 89/190 (46.84%), Query Frame = 0 
Query:  701 LYECLDHFTAEEALIADNGNGYDCERCKARTISSSPAMIGKNKGIAWETKQDARKRLLMLGKPPGVLVCHLKRLQAKR----KITKSVLFDLDLDMSPYFWQDPQAPLTPKEAH--YSLFGLVEHRGNRLGGHYVAYIR------------------DKDGWKHASDSAVRPSTLKEVQGCEAYMLFYER 866
            +  CL  FT  E L  +N     C  C  R  +   A   K          DA K++L +  PP VL  HLKR Q       K+ + V F L LD++P+     Q  LT  +    YSL+G+VEH G    GHY AY++                   +  W H SD++V+P +  +VQGC+AY+LFYER
Sbjct:  675 VQSCLFQFTEVETLTQNNS--LLCVTCTKRQPNKEKAGASKK-----NVYTDALKQML-ISSPPPVLTLHLKRFQQNGYSICKVNRHVQFPLILDLAPFCAVKCQN-LTEGDNQILYSLYGIVEHSGTMRSGHYTAYVKARPECPKLSSNGCTAEDSTRGSWFHVSDTSVQPVSESKVQGCQAYLLFYER 855
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BLAST of mRNA_H-elongata_contig7829.15497.1 vs. uniprot
Match: UPI001C274E76 (ubiquitin carboxyl-terminal hydrolase 2-like isoform X1 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C274E76)

HSP 1 Score: 95.5 bits (236), Expect = 2.740e-16
Identity = 63/169 (37.28%), Postives = 82/169 (48.52%), Query Frame = 0 
Query:  703 ECLDHFTAEEALIADNGNGYDCERCKARTISSSPAMIGKNKGIAWETKQDARKRLLMLGKPPGVLVCHLKRLQ--AKRKITK---SVLFDLDLDMSPYFWQDPQAPLTPKEAHYSLFGLVEHRGNRLGGHYVAYIRDKDGWKHASDSAVRPSTLKEVQGCEAYMLFYER 866
            + LD    E     D   G D +  K     S        K    +  +DA K +L + K P +L  HLKR    A+ +++K    V F   + + PY   DP+         Y L G+VEH G   GGHYVAY+R K  W HASD+ VR  +L EV  CEAY+LFYER
Sbjct:  875 QSLDPHQGECDSEKDGSAGSDLQSVKREAEVSEDEDDDSEK---LKANRDATKSIL-ISKAPAILTIHLKRFSQDARGRLSKLNGHVSFWETITLKPYL--DPRCSDDSCTPSYRLVGVVEHLGTMRGGHYVAYVRSKGAWYHASDAYVRQVSLDEVLRCEAYILFYER 1037
[Close]
BLAST of mRNA_H-elongata_contig7829.15497.1 vs. uniprot
Match: A0A672GIR3_SALFA (Ubiquitin carboxyl-terminal hydrolase 16 n=3 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672GIR3_SALFA)

HSP 1 Score: 94.7 bits (234), Expect = 3.970e-16
Identity = 65/194 (33.51%), Postives = 88/194 (45.36%), Query Frame = 0 
Query:  701 LYECLDHFTAEEALIADNGNGYDCERCKARTISSSPAMIGKNKGIAWETKQDARKRLLMLGKPPGVLVCHLKRLQAKR----KITKSVLFDLDLDMSPYF---WQDPQAPLTPKEAHYSLFGLVEHRGNRLGGHYVAYIR---------------------DKDGWKHASDSAVRPSTLKEVQGCEAYMLFYER 866
            +  CL  FT  E L     N   C  C  R      A   KN         DA K++L +  PP VL  HLKR Q       K+ + V F L LD++P+     +D     T  +  YSL+G+VEH G    GHY AY++                      +  W H SD++V+P +  +VQGC+AY+LFYER
Sbjct:  643 VQSCLFQFTEVETL--SQNNSLLCVTCTKRHRKDGKAAESKN------VYTDALKQML-ISSPPPVLTLHLKRFQQSGYSICKVNRHVQFPLVLDLAPFCAVKCKDTAEEDT--QVLYSLYGIVEHSGTMRSGHYTAYVKVRPDCPKPSSNGIAAEGAAEAPRASWFHISDTSVQPVSESKVQGCQAYLLFYER 825
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7829.15497.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRB3_ECTSI2.140e-6760.80Ubiquitin carboxyl-terminal hydrolase 2 n=1 Tax=Ec... [more]
A0A6H5JSL1_9PHAE4.250e-6659.80USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836C8Y3_9STRA3.990e-2341.21USP domain-containing protein n=1 Tax=Tribonema mi... [more]
UPI00193CA1654.150e-1935.82ubiquitin carboxyl-terminal hydrolase 16 n=1 Tax=N... [more]
A0A482XSJ3_LAOST5.460e-1935.82Ubiquitinyl hydrolase 1 n=1 Tax=Laodelphax striate... [more]
G3PDE1_GASAC5.800e-1732.81Ubiquitin carboxyl-terminal hydrolase 16 n=3 Tax=G... [more]
A0A672FX85_SALFA7.180e-1734.39Ubiquitinyl hydrolase 1 n=1 Tax=Salarias fasciatus... [more]
A0A6I9PHW0_9TELE2.370e-1634.21Ubiquitin carboxyl-terminal hydrolase 16 n=8 Tax=N... [more]
UPI001C274E762.740e-1637.28ubiquitin carboxyl-terminal hydrolase 2-like isofo... [more]
A0A672GIR3_SALFA3.970e-1633.51Ubiquitin carboxyl-terminal hydrolase 16 n=3 Tax=S... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10coord: 646..869
e-value: 2.6E-37
score: 130.9
NoneNo IPR availableGENE3D3.90.70.10coord: 1..157
e-value: 5.2E-11
score: 44.3
NoneNo IPR availablePANTHERPTHR21646:SF39coord: 1..867
NoneNo IPR availablePANTHERPTHR21646FAMILY NOT NAMEDcoord: 1..867
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 25..864
e-value: 1.1E-29
score: 103.7
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 811..828
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..867
score: 26.699
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 34..866

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7829contigH-elongata_contig7829:2586..6452 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7829.15497.1mRNA_H-elongata_contig7829.15497.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7829 1156..6679 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7829.15497.1 ID=prot_H-elongata_contig7829.15497.1|Name=mRNA_H-elongata_contig7829.15497.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=915bp
MQNVFKVRLLHQSLFGNTSGRQGDAFVGPLSKAFRKALLEMGAERSTGSR
RGAYSPKELLSAVQRVDPIFKGTHQQDAHELFMCLMGTLEDEEVAFINQR
LEESNEVKRKEDKCKDIQSDGKGEVEVSSIGAAGSSQASKSVGSSWVHHV
HECSSDVPASASDWNAMADVDGGAWASDTDGNKRGMTGNALILEKGSQIS
SAGTPTSTVEGQEHDAGRSCAVQPVPDSSNETEETGSAGGRGKMGGGFAT
LGGMGTSTDDGETTDASDHDDDVIVGSSAAPSTDGVTVAAVGDAKRMNPG
LPRRAAVTEVFGGLLCSVVTCSTCAARSFSTEPTVCLSLNIAIKSVGKNA
RQAAERSVAQAAITARAAKTAEAARPPDAEKAASKTNALSLQLSAKKRRK
LAREERKRLKFMDAKGKNKGLRESALVGEEIHGRDNDDKRVNAGAKGSEE
AVKESLGENDLKDTTQTVDHGCGSLTDVAKRGCRCEDPLGRRVEGKHTCA
DLTWSNRFLGGAGTSWSAGDEVERDQQAAGAKLDETCKADAGGARVSKSS
ETHGNKCAASETNCGADRPDCGKYLDRVFEGGDDGDSRTDTPTSVTTVSS
WQTEISAADAAPRSPSPSCEQPAAGCREGAPGAKGPSSDKTDKSAVSAYE
GATTGDEDESAAYSSDASDNPVDVKNPLNRLVEPPPRIKKGEGRGELAVD
LYECLDHFTAEEALIADNGNGYDCERCKARTISSSPAMIGKNKGIAWETK
QDARKRLLMLGKPPGVLVCHLKRLQAKRKITKSVLFDLDLDMSPYFWQDP
QAPLTPKEAHYSLFGLVEHRGNRLGGHYVAYIRDKDGWKHASDSAVRPST
LKEVQGCEAYMLFYERCDLNPLTETPGYTESMKANAIVGAAKAMVAPGDE
DRDHVEPLTLQMRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf