prot_H-elongata_contig78265.15496.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig78265.15496.1
Unique Nameprot_H-elongata_contig78265.15496.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length86
Homology
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BLAST of mRNA_H-elongata_contig78265.15496.1 vs. uniprot
Match: D7FIK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK1_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 6.070e-18
Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 0 
Query:    1 YVLGCLGFIPGTVAYVFIGTTASNLLGDXXXXXXXXXXXXXXXXXXXXX--GAIATVIAVVLISIYSKRALNKVLEEQNGEEEAEDAG 86
            Y +GC+GFIPGTVA+VFIGTTAS LLGD    XXXXXXXXX          G IATVIAVVLISIY+KRALNKVLEE   E+EA + G
Sbjct:  210 YAIGCVGFIPGTVAFVFIGTTASGLLGDDSEEXXXXXXXXXGTVQLIVGIVGGIATVIAVVLISIYAKRALNKVLEEDRVEQEALEMG 297
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BLAST of mRNA_H-elongata_contig78265.15496.1 vs. uniprot
Match: A0A7S3YEX9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEX9_HETAK)

HSP 1 Score: 62.0 bits (149), Expect = 2.150e-9
Identity = 50/86 (58.14%), Postives = 59/86 (68.60%), Query Frame = 0 
Query:    1 YVLGCLGFIPGTVAYVFIGTTASNLLGDXXXXXXXXXXXXXXXXXXXXX-------------GAIATVIAVVLISIYSKRALNKVL 73
            YVLGC+G +PGTVAYVFIGT+A+ LLGD         XXXXXXXXXXXX             GA ATV+AVVLI++ S+RAL +VL
Sbjct:  216 YVLGCVGMLPGTVAYVFIGTSAAGLLGDADDGSQESEXXXXXXXXXXXXXXXRLVNIVVLVVGAAATVLAVVLITVASRRALRRVL 301
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BLAST of mRNA_H-elongata_contig78265.15496.1 vs. uniprot
Match: A0A7S2Y1P9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1P9_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.090e-8
Identity = 41/93 (44.09%), Postives = 49/93 (52.69%), Query Frame = 0 
Query:    1 YVLGCLGFIPGTVAYVFIGTTASNLLGDXXXXXXXXXXXXXXXXXXXXX-------------GAIATVIAVVLISIYSKRALNKVLEEQNGEE 80
            Y +GCLG IPGTVAYVFIG++AS + GD                                  GAIATVIAV LIS Y+K+ALN++L E   EE
Sbjct:  192 YTIGCLGIIPGTVAYVFIGSSASGI-GDMKGNDEEQNDNTKDADGEESSSDNDTVFLIVIIVGAIATVIAVFLISWYAKKALNRILNEVELEE 283
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BLAST of mRNA_H-elongata_contig78265.15496.1 vs. uniprot
Match: A0A448ZNF0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNF0_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 3.430e-6
Identity = 48/78 (61.54%), Postives = 58/78 (74.36%), Query Frame = 0 
Query:    1 YVLGCLGFIPGTVAYVFIGTTASNL--LGDXXXXXXXXXXXXXXXXXXXXXGAIATVIAVVLISIYSKRALNKVLEEQ 76
            YVL CLG +PGT+ YVF+G +A +L  LG    XXXXXXXXXXXXXXXXX G +   +AV L S Y+K+ LNKVLEE+
Sbjct:  258 YVLACLGMLPGTIVYVFLGASAGSLAELGGDEDXXXXXXXXXXXXXXXXXVGVVFGFLAVGLTSYYAKQELNKVLEEE 335
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78265.15496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FIK1_ECTSI6.070e-1868.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3YEX9_HETAK2.150e-958.14Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2Y1P9_9STRA1.090e-844.09Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A448ZNF0_9STRA3.430e-661.54Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12677:SF24coord: 5..83
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..64
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..41
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR015414Transmembrane protein TMEM64PANTHERPTHR12677UNCHARACTERIZEDcoord: 5..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig78265contigH-elongata_contig78265:3..260 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig78265.15496.1mRNA_H-elongata_contig78265.15496.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig78265 3..260 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig78265.15496.1 ID=prot_H-elongata_contig78265.15496.1|Name=mRNA_H-elongata_contig78265.15496.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=86bp
YVLGCLGFIPGTVAYVFIGTTASNLLGDDDEEEEDDGGSSTVQLIVIIVG
AIATVIAVVLISIYSKRALNKVLEEQNGEEEAEDAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015414TMEM64