prot_H-elongata_contig7813.15483.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7813.15483.1
Unique Nameprot_H-elongata_contig7813.15483.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length489
Homology
BLAST of mRNA_H-elongata_contig7813.15483.1 vs. uniprot
Match: A0A6H5K1H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H2_9PHAE)

HSP 1 Score: 372 bits (954), Expect = 5.060e-111
Identity = 244/499 (48.90%), Postives = 286/499 (57.31%), Query Frame = 0
Query:    1 GTKDGLPARGAGLPRTEACPVGCNGAAAVEVERKRLNLWTDMEKCIFLDKFIQHPKNFMRIAAFLPRKSPEDAVQFYYDSKTSIDYKVLLKEAVNRSKGYLGQWDTTLKAIRSVGASVSFDEYGQPRFEVPEGDDTFLTADMHPPSRSRPMSDLRREVLSLVLRGEIAGDAADAAKKCVAKVLQLRRNAAVGADDEEPPSDGAFESLLLSDDQLAYACAPLPPMAINIAAYRLCMRERSLAEASADGGYDNGGS-AAQDVVAATGADADGV--VNNETIIPFRFASTRINGVPQDLTAPSGNSSSGKNGIG--SGISINVGNKYSAANGGG----RDGXXXXXXXXAM--PGCSSSFRGGAAERAGLDPEADGASPEENDISGLQGADTGVIANAGEGAGDVGGIGAALXXXXXXXXXXXXGPEEGGTVXXXXXXGKDGAGPLRAPSAKWSKWTGEEREHFFAIHDARPESRDWAMYSDRVGSKTPTQVKTFYSNAKAK 488
            GT D LPAR  GLP   ACP GCN  AAVE ERK LNLWTD+EKCIFLDKF+ HPKNFMRIA+FLPRKSPED VQFYYDSKTSIDYK LLKEAVNR+KGY GQW+ T KAIRSVGA VS DE GQP F VP+ DD+F TADMHPPSR+RP+ D++RE LSL   GEI G AA AAK  V++ L  R  AA G   +   S       LLS  ++  A A LPP AIN+AAYRLCMR         DG  D G   AA DV AA G    G    N   I+P+RF+  R+ GVP +L  P   S++     G  +G  ++   +    +GGG     DG      XX M  PG  S                            L GA  G+    G   G+ GG G A         XXXX              G       R PS K +KWT EERE FF+IHDARP +++W  Y++ + +KTPTQVKTFY+N+K K
Sbjct: 2063 GTTDALPARCRGLPADAACPAGCNCPAAVEAERKLLNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNKGYAGQWNATFKAIRSVGAKVSIDEDGQPFFPVPQRDDSFATADMHPPSRTRPLLDIQREALSLACSGEIVGAAAAAAKTQVSEALLRRAVAAAGIPQQHQESLATEGLDLLSPAEVQAAAARLPPPAINVAAYRLCMRSFP-PPGDCDGDGDGGIIYAALDVAAAAGGAGSGAGRFNEGAIMPYRFSDARVTGVPDELAPPRSASAAXXXAAGDVTGDDVDAPYEPDRLSGGGVRALHDGGRGGRGXXRMGGPGSQSXXXXXXXXXXXXXXXXXXXXXXXEFGDALGGAGRGLGRRGGMSPGEEGGGGRAGKGKRGLSRXXXXXXXXXXXXAGGSTPGSAAGAQQRPPSTKGAKWTVEEREAFFSIHDARPGNKEWERYAELIHTKTPTQVKTFYTNSKNK 2560          
BLAST of mRNA_H-elongata_contig7813.15483.1 vs. uniprot
Match: D8LGU8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGU8_ECTSI)

HSP 1 Score: 349 bits (896), Expect = 2.620e-103
Identity = 249/510 (48.82%), Postives = 294/510 (57.65%), Query Frame = 0
Query:    1 GTKDGLPARGAGLPRTEACPVGCNGAAAVEVERKRLNLWTDMEKCIFLDKFIQHPKNFMRIAAFLPRKSPEDAVQFYYDSKTSIDYKVLLKEAVNRSKGYLGQWDTTLKAIRSVGASVSFDEYGQPRFEVPEGDDTFLTADMHPPSRSRPMSDLRREVLSLVLRGEIAGDAADAAKKCVAKVLQLRRNAAVGADDEEPPSDGAFESLLLSDDQLAYACAPLPPMAINIAAYRLCMRERSLAEASADGGYDNGGS-AAQDVVAATGADADGV--VNNETIIPFRFASTRINGVPQDLTAPSGNSSSGKNGIGSGISINVGNKYSA-------ANGGG----RDGXXXXXXXXAMPGCSSSFRGGAAERAGLDPEADGASPEENDISGLQGADTGVIANAGEGAGDVGGIGAALXXXXXXXXXXXXG-PEEGGTVXXXXXXGKDGAGPLRA-------PSAKWSKWTGEEREHFFAIHDARPESRDWAMYSDRVGSKTPTQVKTFYSNAKAK 488
            GT DGLPAR  GLP   ACP GCN  AAVE ERK  NLWTD+EKCIFLDKF+ HPKNFMRIA+FLPRKSPED VQFYYDSKTSIDYK LLKEAVNR+KGY GQW+ T KAIRSVGA VS DE GQP F VP+ DD+F TADMHPPSR+RP+ D++RE LSL    EI G  A AAK  V++ L+ R  AA G   +   S       LLS  ++  A A LPP AIN+AAYRLCMR     + + DG  D G   AA+DV  A G    G    +   I+P+RF+  R+ GVP +L  P   S               G+   A         GGG     DG  XXXXXX                       + A+  ++D  G        +  AG G G  GG+    XXXXXXXX    G P      XXXXXX                 PS K +KWT EERE FF+IHDARP +++W  Y++ + +KTPTQVKTFY+N+K K
Sbjct: 1847 GTTDGLPARCRGLPADAACPAGCNCPAAVEAERKLSNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNKGYAGQWNATFKAIRSVGAKVSIDEDGQPFFPVPQRDDSFATADMHPPSRTRPLLDIQREALSLACSEEIVGATAAAAKTQVSETLRRRTAAAAGIPQQHHESPTTESLDLLSPAEVQAAAARLPPAAINVAAYRLCMRSFPPPD-NGDGDGDRGVIYAARDVATAAGGAGSGAGRFDEGAIMPYRFSDARVTGVPDELAPPRSASXXXXXXXXXXXXXVAGDDVDAPYEPDRFGGGGGVRALHDGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEEANDNDDDEYGD------ALGGAGRGLGRRGGMSPGXXXXXXXXXKGKRGLPRRKSAXXXXXXXXXXXXXXXXXXXXXXXPPSTKGAKWTVEEREAFFSIHDARPGNKEWERYAELIHTKTPTQVKTFYTNSKNK 2349          
BLAST of mRNA_H-elongata_contig7813.15483.1 vs. uniprot
Match: A0A7S2RFX8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFX8_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.890e-26
Identity = 59/121 (48.76%), Postives = 79/121 (65.29%), Query Frame = 0
Query:   32 ERKRLN--LWTDMEKCIFLDKFIQHPKNFMRIAAFLPRKSPEDAVQFYYDSKTSIDYKVLLKEAVNRSKGYLGQWDTTLKAIRSVGASVSFDEYGQP-RFEVPEGDDTFLTADMHPPSRSR 149
            ERKR+N   W+D+EKCIFLDKF+Q+PKNF +IA+FL +K  +D V+FYYDSK  +DYK LL+E   R +G    W  T KA+   GA ++F E  Q   FE+P    T+ T + HP  + R
Sbjct:   50 ERKRMNDRPWSDLEKCIFLDKFLQYPKNFGKIASFLRQKDAKDCVKFYYDSKKDVDYKALLREYQQRRRGLRLLWTETAKAVERFGAKLTFHEETQEVDFELPASHRTYKTFNRHPKRKRR 170          
BLAST of mRNA_H-elongata_contig7813.15483.1 vs. uniprot
Match: A0A4D9CZ43_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ43_9STRA)

HSP 1 Score: 119 bits (299), Expect = 6.800e-25
Identity = 69/150 (46.00%), Postives = 84/150 (56.00%), Query Frame = 0
Query:    2 TKDGLPARGAGLPRTEACPVGCNGAAAVEVERKRLNLWTDMEKCIFLDKFIQHPKNFMRIAAFLPRKSPEDAVQFYYDSKTSIDYKVLLKEAVNRSKGYLGQWDTTLKAIRSVGASVSF----DEYGQPRFEVPEGDDTFLTADMHPPSR 147
            T DG P R A    TE C   CN   AVE   + +N W+DMEKCIFLDKF+Q+PKNF +IA+FL RKS  D ++FYYDSK  I YK LLKE   R +G          A R VGA++      D +   R   P  D  + T + HP SR
Sbjct:  703 TSDGGPMRCASRTLTEKCTADCNCPRAVERRSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDVIEFYYDSKQCIHYKALLKENEARRRGADQNLVWLKHAARQVGATIDLRCDNDGHEVLRLYPPGNDYLYTTFNKHPGSR 852          
BLAST of mRNA_H-elongata_contig7813.15483.1 vs. uniprot
Match: W7U1T9_9STRA (Nuclear receptor corepressor 1-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1T9_9STRA)

HSP 1 Score: 119 bits (299), Expect = 7.440e-25
Identity = 69/150 (46.00%), Postives = 84/150 (56.00%), Query Frame = 0
Query:    2 TKDGLPARGAGLPRTEACPVGCNGAAAVEVERKRLNLWTDMEKCIFLDKFIQHPKNFMRIAAFLPRKSPEDAVQFYYDSKTSIDYKVLLKEAVNRSKGYLGQWDTTLKAIRSVGASVSF----DEYGQPRFEVPEGDDTFLTADMHPPSR 147
            T DG P R A    TE C   CN   AVE   + +N W+DMEKCIFLDKF+Q+PKNF +IA+FL RKS  D ++FYYDSK  I YK LLKE   R +G          A R VGA++      D +   R   P  D  + T + HP SR
Sbjct: 1006 TSDGGPMRCASRTLTEKCTADCNCPRAVERRSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDVIEFYYDSKQCIHYKALLKENEARRRGADQNLVWLKHAARQVGATIDLRCDNDGHEVLRLYPPGNDYLYTTFNKHPGSR 1155          
BLAST of mRNA_H-elongata_contig7813.15483.1 vs. uniprot
Match: K0SA93_THAOC (SANT domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SA93_THAOC)

HSP 1 Score: 115 bits (287), Expect = 4.610e-24
Identity = 64/141 (45.39%), Postives = 88/141 (62.41%), Query Frame = 0
Query:   12 GLPRTEACPVGCNG----AAAVEVERKRLNLWTDMEKCIFLDKFIQHPKNFMRIAAFLPRKSPEDAVQFYYDSKTSIDYKVLLKEAVNRSK--GYLGQWDTTLKAIRSVGASVSFDEYGQP--RFEVPEGDDTFLTADMHP 144
            G  R+ A   G +G    A A E ERK +N+W+DMEKCIFLD+F+ HPK+F +I++FL  KS +D V+FYYDSK ++ YK  LKE + R K  G +  WD T++A  +VGA V+     +   R  +P GD T+ T   HP
Sbjct:  228 GGARSRARSGGSSGLVDDAQAEEDERKHVNVWSDMEKCIFLDRFLHHPKDFRKISSFLVNKSTKDCVRFYYDSKKTVPYKHALKEFLQRKKRRGDVVSWDATVQAALAVGAVVTEGTGPEDPVRISLPPGDYTYRTRSFHP 368          
BLAST of mRNA_H-elongata_contig7813.15483.1 vs. uniprot
Match: A0A6U3TBG9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TBG9_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.910e-23
Identity = 59/122 (48.36%), Postives = 83/122 (68.03%), Query Frame = 0
Query:   30 EVERKRLNLWTDMEKCIFLDKFIQHPKNFMRIAAFLPRKSPEDAVQFYYDSKTSIDYKVLLKEAVNRSK--GYLGQWDTTLKAIRSVGASVSFDEYGQPR--FEVPEGDDTFLTADMHPPSR 147
            E ER+ ++ W+DMEKCIFLD+F+QHPK+F +IA+FL  K+ +D V FYYDSK SI YK  LKE + R K  G +  W+ T++A  SVGA ++     +    F++P+GD+TF T + HP  R
Sbjct: 1086 EEERRNVSAWSDMEKCIFLDRFLQHPKDFRKIASFLRNKTTKDCVSFYYDSKQSIPYKAALKEHLQRKKRRGDVS-WEATIQAALSVGAVITAGTSPEKPLVFKLPQGDNTFYTRNFHPMKR 1206          
BLAST of mRNA_H-elongata_contig7813.15483.1 vs. uniprot
Match: A0A7S3M6N9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6N9_9STRA)

HSP 1 Score: 115 bits (287), Expect = 2.670e-23
Identity = 53/117 (45.30%), Postives = 77/117 (65.81%), Query Frame = 0
Query:    2 TKDGLPARGAGLPRTEACPVGCNGAAAVEVERKRLNLWTDMEKCIFLDKFIQHPKNFMRIAAFLPRKSPEDAVQFYYDSKTSIDYKVLLKEAVNRSKGYLGQWDTTLKAIRSVGASV 118
            T DG     + +P  +ACP+ CN A  V+  +K   +W+D EKCIF+DKF+Q PKNF RI+ FL  +S +D ++FYYD+K +I++K LLKE  +R K +   W+ T KA   VGA++
Sbjct: 1242 TTDGKKQACSMIPLAKACPINCNCALQVDKLQKLERIWSDTEKCIFIDKFLQFPKNFHRISTFLTNRSTKDCIKFYYDAKGTIEFKFLLKEFDSRRKTFKSTWNYTTKAAHMVGATI 1358          
BLAST of mRNA_H-elongata_contig7813.15483.1 vs. uniprot
Match: A0A7S2PKC0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PKC0_9STRA)

HSP 1 Score: 109 bits (272), Expect = 3.800e-23
Identity = 54/119 (45.38%), Postives = 78/119 (65.55%), Query Frame = 0
Query:   36 LNLWTDMEKCIFLDKFIQHPKNFMRIAAFLPRKSPEDAVQFYYDSKTSIDYKVLLKEAVNRSKGYLGQWDTTLKAIRSVGASV-------SFDEYGQPRFEVPEGDDTFLTADMHPPSR 147
            +N W+D+EKCIFLD+F Q+PKNF +IA+FL  KS  D V++YYDSK SI YK  LKE   R K    +W+ T++A++SVGA V       S +  G P F +P  ++++ T  +HP ++
Sbjct:    1 VNPWSDVEKCIFLDRFFQYPKNFKKIASFLRNKSTSDCVRYYYDSKQSIPYKKALKEHWLRRKKRADEWEHTMEAVQSVGAQVVSSSSGDSSESGGPPEFILPTDENSYHTRHLHPKTK 119          
BLAST of mRNA_H-elongata_contig7813.15483.1 vs. uniprot
Match: A0A1Z5JC82_FISSO (Nuclear receptor co-repressor 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JC82_FISSO)

HSP 1 Score: 112 bits (279), Expect = 2.530e-22
Identity = 59/122 (48.36%), Postives = 80/122 (65.57%), Query Frame = 0
Query:   31 VERKRL----NLWTDMEKCIFLDKFIQHPKNFMRIAAFLPRKSPEDAVQFYYDSKTSIDYKVLLKEAVNRSK--GYLGQWDTTLKAIRSVGASVSF--DEYGQPRFEVPEGDDTFLTADMHP 144
            VE+++L    N+WTD EKCIFLD+F+QHPK+F +IA+FL  K+  D ++FYYDSK ++ YK  LKE + R K  G    W+ T++A  SVGA V    DE     F +PE D T+ T D+HP
Sbjct: 1032 VEQEKLCAMENMWTDTEKCIFLDRFLQHPKDFRKIASFLRNKTTRDCIKFYYDSKQTVSYKGALKEHIMRRKRRGEYHVWEATIQAALSVGAVVKAGTDEENPLVFTLPENDCTYNTRDLHP 1153          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7813.15483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1H2_9PHAE5.060e-11148.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGU8_ECTSI2.620e-10348.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2RFX8_9STRA2.890e-2648.76Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A4D9CZ43_9STRA6.800e-2546.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U1T9_9STRA7.440e-2546.00Nuclear receptor corepressor 1-like protein n=1 Ta... [more]
K0SA93_THAOC4.610e-2445.39SANT domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6U3TBG9_9STRA1.910e-2348.36Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S3M6N9_9STRA2.670e-2345.30Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2PKC0_9STRA3.800e-2345.38Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A1Z5JC82_FISSO2.530e-2248.36Nuclear receptor co-repressor 1 n=2 Tax=Fistulifer... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 438..488
e-value: 10.0
score: 8.9
coord: 35..83
e-value: 0.04
score: 23.1
NoneNo IPR availableGENE3D1.10.10.60coord: 23..87
e-value: 3.8E-19
score: 70.6
NoneNo IPR availableGENE3D1.20.58.1880coord: 414..488
e-value: 8.2E-6
score: 28.0
NoneNo IPR availablePANTHERPTHR13992NUCLEAR RECEPTOR CO-REPRESSOR RELATED NCORcoord: 31..487
IPR017884SANT domainPROSITEPS51293SANTcoord: 34..85
score: 13.761
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 434..485
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 34..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7813contigH-elongata_contig7813:2908..10230 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7813.15483.1mRNA_H-elongata_contig7813.15483.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7813 2908..10230 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7813.15483.1 ID=prot_H-elongata_contig7813.15483.1|Name=mRNA_H-elongata_contig7813.15483.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=489bp
GTKDGLPARGAGLPRTEACPVGCNGAAAVEVERKRLNLWTDMEKCIFLDK
FIQHPKNFMRIAAFLPRKSPEDAVQFYYDSKTSIDYKVLLKEAVNRSKGY
LGQWDTTLKAIRSVGASVSFDEYGQPRFEVPEGDDTFLTADMHPPSRSRP
MSDLRREVLSLVLRGEIAGDAADAAKKCVAKVLQLRRNAAVGADDEEPPS
DGAFESLLLSDDQLAYACAPLPPMAINIAAYRLCMRERSLAEASADGGYD
NGGSAAQDVVAATGADADGVVNNETIIPFRFASTRINGVPQDLTAPSGNS
SSGKNGIGSGISINVGNKYSAANGGGRDGGGGEDGGGAMPGCSSSFRGGA
AERAGLDPEADGASPEENDISGLQGADTGVIANAGEGAGDVGGIGAALAA
VEAAIPAAATGPEEGGTVKGGTAGGKDGAGPLRAPSAKWSKWTGEEREHF
FAIHDARPESRDWAMYSDRVGSKTPTQVKTFYSNAKAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017884SANT_dom
IPR009057Homeobox-like_sf