prot_H-elongata_contig7810.15480.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7810.15480.1
Unique Nameprot_H-elongata_contig7810.15480.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length399
Homology
BLAST of mRNA_H-elongata_contig7810.15480.1 vs. uniprot
Match: D7FUP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP1_ECTSI)

HSP 1 Score: 304 bits (779), Expect = 1.210e-96
Identity = 219/423 (51.77%), Postives = 265/423 (62.65%), Query Frame = 0
Query:    1 WDWADPWGQEAAWGASAWDVGTTQETRLYRDSDAVPTPGTPPKRA------IYTPPDPERGGGVRGS-WGT----GTDQTGAGFHSAGTATVGVDGDA-AVATVAAARRKEQ--EELARALTETREELENAREVEEGLRN---RMLNTSACVFH--------SSALRAQEEAKASTAAAASAAGERAKRAEALVKQREEEARENATAVGQWLVTLGLEQQSLRGQLVAEQSNSTLLTKELVDLRETAKKAELRGSSSEAKLKVALEDVAVLDEGLKQYMDGDGQRRTPRPSHG--IWRRVSEAYLHPLLPSKLKTPSLEEREVDKLNRTLGRALENNTALAEAVKSKDELVSNLNSRIKQFQLQAVRRKKGYRALKLGLADLTREASTGNLVQSKESMAIILVVAMVRTASILDQTSAVIFAQ 396
            WDWADPWGQ A+WGA  W  G  +           P P    K        I + PD   G GV GS WG     G ++ G     A  A +G  G+A A A    A R E    ELARA       LE AR+V+  LR    R L  S   +          +AL+ +EE KA+  AAA+AA E+ ++AEA   ++ E A+ENATA GQWLV+LGLE++ L+GQL A Q+NST L +EL  L+E+A +AELR +SSEAKL++A+ED+ VLDEGLK +MDGDGQ R      G   WRRVSEAYL PLLPSKLK P+ EE E  KLNR+LGRALENNTALAEAV SKD+LV  LNSRIKQFQL AVRRKKGYRALKLGLA+LT E      VQ+KE+M  IL V M+ T+SIL+   A + AQ
Sbjct:    8 WDWADPWGQGASWGAPGWAPGAERTPESQPGGSPPPAPSHTSKEELDGGHPIGSVPD---GAGVAGSGWGRHHSGGGERPGVAPTVAAGAALGAGGEATADAAEKGATRNEGGVTELARAXXXXXXXLEEARKVQAELRQPTRRALPASRAPWFVRSVVPGKRTALKEEEEGKAAALAAATAAEEKTEKAEAFALRQAESAKENATAAGQWLVSLGLEREELKGQLAAAQTNSTSLLEELSALKESAVEAELRANSSEAKLRMAMEDIEVLDEGLKLFMDGDGQPRQQSSRAGPLSWRRVSEAYLRPLLPSKLKAPTPEELEALKLNRSLGRALENNTALAEAVSSKDDLVKELNSRIKQFQLHAVRRKKGYRALKLGLAELTNE------VQAKETMMTILTVCMLGTSSILEGMDATLDAQ 421          
BLAST of mRNA_H-elongata_contig7810.15480.1 vs. uniprot
Match: A0A6H5K749_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K749_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 1.160e-77
Identity = 196/422 (46.45%), Postives = 240/422 (56.87%), Query Frame = 0
Query:    1 WDWADPWGQEAAWGASAWDVGTTQETRLYRDSDAVPTPGTPPKRAIYTPPDPERGGGVRGSWGTGTDQTGAGF---HSAGTATVGVDGDAAVATVAAARRKEQEELARALTETREELEN---------------------AREVEEGLRNRMLNTSACVFHSSALRAQEEAKASTAAAASAAGERAKRAEALVKQREEEARENATAVGQWLVTLGLEQQSLRGQLVAEQSNSTLLTKELVDLRETAKKAELRGSSSEAKLKVALEDVAVLDEGLKQYMDGDGQRRTPRPSHG--IWRRVSEAYLHPLLPSKLKTPSLEEREVDKLNRTLGRALENNTALAEAVKSKDELVSNLNSRIKQFQLQAVRRKKGYRALKLGLADLTREASTGNLVQSKESMAIILVVAMVRTASILDQTSAVIFAQ 396
            WDWADPWGQ A+WGA  W  G  +   +       P P    K  +        GG   GS   GT   G+G+   HS G    GV    A                                                 AR+V+  LR             +AL+ +EE KA+  AAA+      ++AEA   ++ E A+ENATA GQWLV+LGLE++ L+GQL A Q+NST L +EL  L+E+A +AELR +SSE KL++A+ED+ VLDEGLK +MDGDGQ R      G   WRRVS+AYL PLLPSKLK P+ EE E  KLNR+LGRALENNTALAEAV SKD+LV  LNSRIKQFQL AVRRKKGYRALKLGLA+LT E      VQ+KE+M  IL V M+ T+SIL+   A + AQ
Sbjct:  533 WDWADPWGQGASWGAPGWAPGAERTQEIQPGGSPPPAPSPIFKEELD-------GGHPIGSVPDGTGVAGSGWGRHHSGGGERPGVASKVAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARQVQAELR-------------AALKKEEEGKAAALAAATXXXXXTEKAEAFALRQAESAKENATAAGQWLVSLGLEREELKGQLAAAQTNSTSLLEELSALKESAVEAELRANSSETKLRMAMEDIEVLDEGLKLFMDGDGQPRQQSSRAGPLSWRRVSDAYLRPLLPSKLKAPTPEELEALKLNRSLGRALENNTALAEAVSSKDDLVKELNSRIKQFQLHAVRRKKGYRALKLGLAELTNE------VQAKETMMTILTVCMLGTSSILEGMYASLEAQ 928          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7810.15480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUP1_ECTSI1.210e-9651.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K749_9PHAE1.160e-7746.45WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 155..175
NoneNo IPR availableCOILSCoilCoilcoord: 97..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7810contigH-elongata_contig7810:3447..7663 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7810.15480.1mRNA_H-elongata_contig7810.15480.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7810 3447..7663 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7810.15480.1 ID=prot_H-elongata_contig7810.15480.1|Name=mRNA_H-elongata_contig7810.15480.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=399bp
WDWADPWGQEAAWGASAWDVGTTQETRLYRDSDAVPTPGTPPKRAIYTPP
DPERGGGVRGSWGTGTDQTGAGFHSAGTATVGVDGDAAVATVAAARRKEQ
EELARALTETREELENAREVEEGLRNRMLNTSACVFHSSALRAQEEAKAS
TAAAASAAGERAKRAEALVKQREEEARENATAVGQWLVTLGLEQQSLRGQ
LVAEQSNSTLLTKELVDLRETAKKAELRGSSSEAKLKVALEDVAVLDEGL
KQYMDGDGQRRTPRPSHGIWRRVSEAYLHPLLPSKLKTPSLEEREVDKLN
RTLGRALENNTALAEAVKSKDELVSNLNSRIKQFQLQAVRRKKGYRALKL
GLADLTREASTGNLVQSKESMAIILVVAMVRTASILDQTSAVIFAQVN*
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