prot_H-elongata_contig78038.15474.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig78038.15474.1
Unique Nameprot_H-elongata_contig78038.15474.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length80
Homology
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BLAST of mRNA_H-elongata_contig78038.15474.1 vs. uniprot
Match: A0A6H5J7P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P3_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 8.480e-21
Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 0 
Query:    1 MEQAFERQKERAAAGDDVPYVLARTLRSNIQCNAAIALKAKGSGNQCKRGACMERAMSMFCGKKGEGIPREVVLALARY 79
            ++   +RQKER + GD+V YVLART+R  +Q  AA  + A G GNQC+RG C  RAM MF GK  EGIPR+VVLAL RY
Sbjct:  145 IQHVLDRQKERDSQGDNVSYVLARTVRRILQYLAAQEIGASGQGNQCRRGDCFARAMGMFFGKGMEGIPRDVVLALLRY 223
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BLAST of mRNA_H-elongata_contig78038.15474.1 vs. uniprot
Match: D8LNQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ5_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 5.050e-10
Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = 0 
Query:    1 MEQAFERQKERAAAGDDVPYVLARTLRSNIQCNAAIALKAKGSGNQCKRGACMERAMSMFCGKKG 65
            ++   +RQK R + GD+VPYVLART+RSN+Q  AA  + A G GNQC+RG        MFC + G
Sbjct:  112 IQHVLDRQKARDSEGDNVPYVLARTVRSNLQYLAAQEIGATGQGNQCRRG--------MFCSRYG 168
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78038.15474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J7P3_9PHAE8.480e-2158.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNQ5_ECTSI5.050e-1049.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig78038contigH-elongata_contig78038:31..687 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig78038.15474.1mRNA_H-elongata_contig78038.15474.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig78038 5..1000 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig78038.15474.1 ID=prot_H-elongata_contig78038.15474.1|Name=mRNA_H-elongata_contig78038.15474.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp
MEQAFERQKERAAAGDDVPYVLARTLRSNIQCNAAIALKAKGSGNQCKRG
ACMERAMSMFCGKKGEGIPREVVLALARY*
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