prot_H-elongata_contig78023.15473.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig78023.15473.1
Unique Nameprot_H-elongata_contig78023.15473.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length228
Homology
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: A0A6H5L264_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L264_9PHAE)

HSP 1 Score: 365 bits (937), Expect = 3.190e-125
Identity = 203/233 (87.12%), Postives = 211/233 (90.56%), Query Frame = 0
Query:    1 RSVSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDP-----SGLDEVARSTAGFSGAELANVINEAAMLAAR 228
            RSVSFAD+AGADEAK EL ELVDFL    ARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEA VPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLP+  GRR ILEVH +KVRM        + L+ +AR TAGFSGAELANV+NEAA+LAAR
Sbjct:   31 RSVSFADIAGADEAKVELKELVDFL-TFPARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEARVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPDAPGRRAILEVHCRKVRMQGGRQDTIAVLENIARVTAGFSGAELANVVNEAAILAAR 262          
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: D8LSS7_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSS7_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 1.750e-123
Identity = 203/233 (87.12%), Postives = 212/233 (90.99%), Query Frame = 0
Query:    1 RSVSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRM-GDPSG----LDEVARSTAGFSGAELANVINEAAMLAAR 228
            RSVSFAD+AGADEAK EL ELVDFL    ARYAD+GARLPRGVLLSGPSGTGKTLLARAMAAEA VPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLP+  GRR ILEVH +KVRM G+       L+ +AR TAGFSGAELANV+NEAA+LAAR
Sbjct:  187 RSVSFADIAGADEAKVELKELVDFL-TFPARYADIGARLPRGVLLSGPSGTGKTLLARAMAAEARVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPDAPGRRAILEVHCRKVRMQGERQDTIAVLENIARVTAGFSGAELANVVNEAAILAAR 418          
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: A0A835Z9E9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9E9_9STRA)

HSP 1 Score: 292 bits (747), Expect = 1.080e-96
Identity = 161/226 (71.24%), Postives = 180/226 (79.65%), Query Frame = 0
Query:   17 ELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRS--------------VLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDPSGLDEVARSTAGFSGAELANVINEAAMLAAR 228
            ELAE+VDFL + A RY  +GARLPRG+LLSGPSGTGKTLLARA+AAE+ VPF SCSASDFVEMLVGRGA+RVRDLF+RG A+ P IIF+DELDALAK RGG+NSNDEREQTLNQLLTE+DGFDS   +                 +AATNRPEVLDPALTRPGRFDRHV VGLP+E GR  IL VH +KVR G    L  VAR TAGFSGAELAN++NEAA+LA R
Sbjct:   15 ELAEVVDFLRD-ARRYEAMGARLPRGILLSGPSGTGKTLLARAVAAESRVPFISCSASDFVEMLVGRGASRVRDLFKRGAAAAPCIIFVDELDALAKARGGLNSNDEREQTLNQLLTELDGFDSSVAASAXXXXXXXXXXXXXXXIAATNRPEVLDPALTRPGRFDRHVHVGLPDERGRVSILTVHMRKVRAGPDVDLRTVARETAGFSGAELANIVNEAALLAVR 239          
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: A0A4D9CR60_9STRA (AAA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR60_9STRA)

HSP 1 Score: 288 bits (738), Expect = 1.060e-93
Identity = 154/228 (67.54%), Postives = 182/228 (79.82%), Query Frame = 0
Query:    1 RSVSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDPSGLDEVARSTAGFSGAELANVINEAAMLAAR 228
            R ++F DVAG D AK EL E+V+FL +  ARY  +GARLP+G+LLSG  GTGKTLLARA+A EAGV F SCSAS+F E+LVGRGAAR+RDLFQRG +S P IIFIDELDALAK RG  +SNDEREQTLNQLL EMDGF+ E   VLV+AATNRPEVLDPAL RPGRFDRH+ VGLP+  GRR IL+VHS+ V +     +  +A  + G+SGAEL+NV+NEAA+LA R
Sbjct:  106 RVITFKDVAGIDAAKLELVEVVNFLRD-RARYDAIGARLPKGILLSGAPGTGKTLLARAVANEAGVSFISCSASEFCELLVGRGAARMRDLFQRGFSSSPCIIFIDELDALAKTRGSFSSNDEREQTLNQLLCEMDGFEGEENCVLVIAATNRPEVLDPALIRPGRFDRHIAVGLPDTRGRRAILDVHSRHVCLAPGVDMQRIATRSKGYSGAELSNVVNEAALLAVR 332          
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: A0A024FZ62_9STRA (AAA domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZ62_9STRA)

HSP 1 Score: 280 bits (717), Expect = 1.520e-91
Identity = 155/232 (66.81%), Postives = 182/232 (78.45%), Query Frame = 0
Query:    1 RSVSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGF-DSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDPSGLDEVARSTAGF---SGAELANVINEAAMLAAR 228
            +SVSF D+ G D A+ EL E+VDFL     RY  +GAR+P+G+LL GPSGTGKTLLARA+AAEA V F  CSASDFVEMLVGRGAARVRDLF +       IIFIDE+DALAK RGGINSNDEREQTLNQLLTEMDGF  SE  SV+V+AATNRP+VLDPAL RPGRFDRHV VGLP+  GR  IL++H+++V++GD   L+ VA +       SGAELAN++NEAA+LA R
Sbjct:   63 QSVSFQDIGGIDSARKELEEIVDFL-HNPDRYRAIGARVPKGILLCGPSGTGKTLLARALAAEANVAFLFCSASDFVEMLVGRGAARVRDLFTQAATYDRCIIFIDEIDALAKARGGINSNDEREQTLNQLLTEMDGFAGSESNSVIVIAATNRPQVLDPALCRPGRFDRHVYVGLPDHKGRLDILKLHTRRVKLGDDVDLNRVAENCGIMGQQSGAELANLVNEAALLAVR 293          
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: A0A1V9YPE2_9STRA (Cell division protease ftsH n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPE2_9STRA)

HSP 1 Score: 284 bits (726), Expect = 2.290e-91
Identity = 154/230 (66.96%), Postives = 183/230 (79.57%), Query Frame = 0
Query:    1 RSVSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDPSGLDEVARSTA--GFSGAELANVINEAAMLAAR 228
            + +SFADVAG D+AK EL E+VDFL +   RY  +GA++P+GVLL GPSGTGKTLLARA+AAEAGV F  CSASDFVEMLVGRGA+RVRDLF +       IIFIDELDALAK RGG+NSNDEREQTLNQLLTEMDGF+     V+V+AATNRP VLDPAL RPGRFDRHV VGLP+ AGR  IL VH+K++R+G    L  +A+S    G+SGA+LA ++NEAA++A R
Sbjct:  171 KRISFADVAGIDKAKKELEEVVDFL-KHPERYEKIGAKIPKGVLLCGPSGTGKTLLARAVAAEAGVAFLYCSASDFVEMLVGRGASRVRDLFTQASQHPKCIIFIDELDALAKARGGLNSNDEREQTLNQLLTEMDGFEGHTEGVIVIAATNRPHVLDPALCRPGRFDRHVYVGLPDAAGREAILSVHAKRIRLGTSVVLGALAKSPKLDGYSGAQLACLVNEAALMAVR 399          
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: A0A1W0A7G4_9STRA (Cell division protease ftsH n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7G4_9STRA)

HSP 1 Score: 280 bits (717), Expect = 5.540e-90
Identity = 151/230 (65.65%), Postives = 182/230 (79.13%), Query Frame = 0
Query:    1 RSVSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDPSGLDEVARSTA--GFSGAELANVINEAAMLAAR 228
            + +SFADVAG D+AK EL E+VDFL +   RY  +GA++P+GVLL GPSGTGKTLLARA+AAEAGV F  CSASDFVEMLVGRGA+RVRDLF +       IIFIDELDALAK RGGINSNDEREQTLNQLLTEMDGF+     V+V+AATNRP VLDPAL RPGRFDRHV VGLP+  GR  IL+VH+ ++R+     + E+A++    G+SGA+LA ++NEAA++A R
Sbjct:  171 KRISFADVAGIDKAKKELEEVVDFL-KNPQRYEKIGAKIPKGVLLCGPSGTGKTLLARAVAAEAGVAFLYCSASDFVEMLVGRGASRVRDLFTQASQHPKCIIFIDELDALAKARGGINSNDEREQTLNQLLTEMDGFEGHTEGVIVIAATNRPHVLDPALCRPGRFDRHVYVGLPDANGREAILKVHANRIRLRPSLSIAEIAKNPKLNGYSGAQLACLVNEAALMAVR 399          
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: A0A6G0WHW9_9STRA (AAA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHW9_9STRA)

HSP 1 Score: 279 bits (714), Expect = 1.360e-89
Identity = 151/228 (66.23%), Postives = 178/228 (78.07%), Query Frame = 0
Query:    3 VSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDPSGLDEVA--RSTAGFSGAELANVINEAAMLAAR 228
            +SFAD+AG D AK EL E+VDFL +   RY  +GA++P+GVLL GPSGTGKT+LARA+AAEAGVPF  CSASDFVEMLVGRGA+RVRDLF +       IIFIDE+DALAK RGG+NSNDEREQTLNQLLTEMDGF+     VLV+AATNRP VLDPAL RPGRFDRHV VGLP+  GR  IL VH K++R+     + E+A  R   G SGA+LA ++NEAA++A R
Sbjct:  171 ISFADIAGIDAAKQELEEIVDFL-KRPQRYEAIGAKIPKGVLLCGPSGTGKTMLARAVAAEAGVPFLFCSASDFVEMLVGRGASRVRDLFTQASQHAKCIIFIDEIDALAKARGGLNSNDEREQTLNQLLTEMDGFEGHTEGVLVIAATNRPHVLDPALLRPGRFDRHVFVGLPDATGREAILRVHVKRIRLHSRVSIKELAVNRQLEGASGAQLACLVNEAALMAVR 397          
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: A0A7S2RJG8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJG8_9STRA)

HSP 1 Score: 280 bits (716), Expect = 1.810e-89
Identity = 152/231 (65.80%), Postives = 185/231 (80.09%), Query Frame = 0
Query:    1 RSVSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRG-GINSNDEREQTLNQLLTEMDGFDSEGRS--VLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDPSGLDEVARSTAGFSGAELANVINEAAMLAAR 228
            + V+F DVAG D AKAEL E+VDFL + + R+  +GAR+P+G+LL+GP+GTGKT+LARAMA E G PF   SAS+FVE LVGRGAARVRDLF+R     P+IIFIDE+D+L + RG  +NSN+EREQTLNQ+LTEMDGFDS G S  +LV+AATNRP+VLDPAL RPGRFDRHV VGLP+  GR  IL  H++++RM     L  VARSTAGFSGA+LANV+NEAA+LA R
Sbjct:  193 QGVTFNDVAGVDAAKAELLEVVDFLRD-SERFRKMGARMPKGLLLAGPAGTGKTMLARAMANEVGAPFLVVSASEFVETLVGRGAARVRDLFKRARDQAPAIIFIDEVDSLGRARGLSLNSNEEREQTLNQILTEMDGFDSSGSSAPILVIAATNRPQVLDPALLRPGRFDRHVYVGLPDVTGREAILASHARRIRMDSTVDLSAVARSTAGFSGADLANVVNEAALLAVR 422          
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Match: T0QP29_SAPDV (AAA domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QP29_SAPDV)

HSP 1 Score: 279 bits (713), Expect = 2.040e-89
Identity = 153/228 (67.11%), Postives = 179/228 (78.51%), Query Frame = 0
Query:    3 VSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSGTGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQPSIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAATNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDPSGLDEVARSTA--GFSGAELANVINEAAMLAAR 228
            +SFADVAG D+AK EL E+VDFL +   RY  +GA++P+GVLL GPSGTGKTLLARA+AAEAGV F  CSASDFVEMLVGRGA+RVRDLF +       IIFIDELDALAK RGG+NSNDEREQTLNQLLTEMDGF+     V+V+AATNRP VLDPAL RPGRFDRHV VGLP+ AGR  IL VH K++R G    +  +A++    G SGA+LA ++NEAA+LA R
Sbjct:  173 ISFADVAGIDKAKKELEEVVDFL-KRPQRYETIGAKIPKGVLLCGPSGTGKTLLARAVAAEAGVAFLYCSASDFVEMLVGRGASRVRDLFTQASQHPKCIIFIDELDALAKARGGLNSNDEREQTLNQLLTEMDGFEGHTEGVIVIAATNRPHVLDPALCRPGRFDRHVYVGLPDAAGREAILRVHMKRIRTGLTVSVTTIAKNPKLDGSSGAQLACLVNEAALLAVR 399          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig78023.15473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L264_9PHAE3.190e-12587.12AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LSS7_ECTSI1.750e-12387.12AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z9E9_9STRA1.080e-9671.24P-loop containing nucleoside triphosphate hydrolas... [more]
A0A4D9CR60_9STRA1.060e-9367.54AAA domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A024FZ62_9STRA1.520e-9166.81AAA domain-containing protein n=1 Tax=Albugo candi... [more]
A0A1V9YPE2_9STRA2.290e-9166.96Cell division protease ftsH n=1 Tax=Achlya hypogyn... [more]
A0A1W0A7G4_9STRA5.540e-9065.65Cell division protease ftsH n=1 Tax=Thraustotheca ... [more]
A0A6G0WHW9_9STRA1.360e-8966.23AAA domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A7S2RJG8_9STRA1.810e-8965.80Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
T0QP29_SAPDV2.040e-8967.11AAA domain-containing protein n=2 Tax=Saprolegnia ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 39..177
e-value: 1.2E-20
score: 84.6
NoneNo IPR availableGENE3D1.10.8.60coord: 176..228
e-value: 3.2E-16
score: 60.9
NoneNo IPR availableGENE3D3.40.50.300coord: 1..174
e-value: 3.1E-61
score: 208.2
NoneNo IPR availablePANTHERPTHR23076:SF49ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 9, CHLOROPLASTICcoord: 3..228
NoneNo IPR availablePANTHERPTHR23076METALLOPROTEASE M41 FTSHcoord: 3..228
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 43..174
e-value: 1.3E-41
score: 142.1
IPR041569AAA ATPase, AAA+ lid domainPFAMPF17862AAA_lid_3coord: 200..228
e-value: 1.2E-9
score: 37.8
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 145..163
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig78023contigH-elongata_contig78023:452..2777 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig78023.15473.1mRNA_H-elongata_contig78023.15473.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig78023 452..2777 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig78023.15473.1 ID=prot_H-elongata_contig78023.15473.1|Name=mRNA_H-elongata_contig78023.15473.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=228bp
RSVSFADVAGADEAKAELAELVDFLGEGAARYADVGARLPRGVLLSGPSG
TGKTLLARAMAAEAGVPFFSCSASDFVEMLVGRGAARVRDLFQRGVASQP
SIIFIDELDALAKVRGGINSNDEREQTLNQLLTEMDGFDSEGRSVLVVAA
TNRPEVLDPALTRPGRFDRHVTVGLPNEAGRRGILEVHSKKVRMGDPSGL
DEVARSTAGFSGAELANVINEAAMLAAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003959ATPase_AAA_core
IPR041569AAA_lid_3
IPR003960ATPase_AAA_CS
IPR027417P-loop_NTPase