mRNA_H-elongata_contig77904.15466.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig77904.15466.1 vs. uniprot
Match: D8LKW3_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW3_ECTSI) HSP 1 Score: 301 bits (770), Expect = 1.650e-92 Identity = 164/301 (54.49%), Postives = 205/301 (68.11%), Query Frame = 1
Query: 1 KAKGEGVSNREIFDKISRAQVAIPGNNNITVI-------NRKCRAGSHQHFRKRASTLSNNFLASF-RRKSALGVVAHDTKKHRRNQIFEDGFDFTSAGAREEMAKLKGG-----EVFQDGNEKLILEAMETLFFVGEDCTEQMNALIDTMEKLALPSGEWLMREGDPGDAMYVIKSGKLDVYVGSSLTRHVERGNAVGELALLYHTPRSASVKAVEDCELFCLQRNKFRDMLALSVSSSLVQRLAWMQAIRELEPLDQESASRLAGAFSTMHLRQGEVAVAEGGTIDRCFMIEHGTVEAR 864
KAKG GV+NREIFDK+SRA+VA+P + + NR+ RAGSHQH + + S++S + RR S LG+ +HD KKHRR+QIFEDGFDFT A R+EMAK +GG EVFQDGN+KLILEA+ FF+GE+ T QMN+LIDTMEK + SGEWLM+EG+PGDAMYVIK+GKL+VYVG +LTRHV G AVGELALLYHTPRSASVK +PLD+++ASRLAGAF+T+ LR+GE EGGT+DRC++IE+G+VE +
Sbjct: 27 KAKGAGVTNREIFDKMSRARVALPDDGDDDKARQPKKEPNRQIRAGSHQHIQHQGSSMSAKLVPDNPRRNSVLGITSHDNKKHRRDQIFEDGFDFTLADTRKEMAKQQGGFDKTKEVFQDGNDKLILEALVNFFFIGEESTNQMNSLIDTMEKSSCRSGEWLMQEGEPGDAMYVIKTGKLEVYVGGTLTRHVGPGCAVGELALLYHTPRSASVK----------------------------------------DPLDKQAASRLAGAFTTIQLREGETVSTEGGTVDRCYLIEYGSVEVK 287
BLAST of mRNA_H-elongata_contig77904.15466.1 vs. uniprot
Match: A0A835YKT1_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKT1_9STRA) HSP 1 Score: 141 bits (356), Expect = 3.470e-34 Identity = 88/212 (41.51%), Postives = 122/212 (57.55%), Query Frame = 1
Query: 217 KKHRRNQIFEDGFDFTSAGA--REEMAKLKGGEVFQDGNEKLILEAMETLFFVGEDCTEQ------MNALIDTMEKLALPSGEWLMREGDPGDAMYVIKSGKLDVYVGSSLTRHVERGNAVGELALLYHTPRSASVKAVEDCE-LFCLQRNKFRDMLALSVSSSLVQRLAWMQAIRELEPLDQESASRLAGAFSTMHLRQGEVAVAEGGTID 825
K+ RR +IFE G DF R ++ K VFQ N LI AM +FF G D +Q + L+D+ E +A +GEWLM+EG+ GD MY++ G L V VG R + RG+AVGELAL+Y PRSASV+A L+ L R+KFR++ A++ S +LV R+ + A LE +D+ + S L GA + L+ GE V E TI+
Sbjct: 117 KRARRIRIFERGVDFADEARLNRLHISLDKSKAVFQPENRALIQAAMGKVFFTGGDSPQQGLQGAAFDRLLDSFEMVACAAGEWLMKEGEEGDNMYIVAEGSLQVLVGGEKVRDIGRGDAVGELALIYSAPRSASVRAAPAAAVLWSLCRDKFREVQAVTSSEALVARVEMLSAAPALEVVDRYALSLLGGAAEGVTLQAGETMVVEKDTIE 328
BLAST of mRNA_H-elongata_contig77904.15466.1 vs. uniprot
Match: A0A7S2UWP0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWP0_9STRA) HSP 1 Score: 135 bits (340), Expect = 3.570e-34 Identity = 68/157 (43.31%), Postives = 106/157 (67.52%), Query Frame = 1
Query: 388 QMNALIDTMEKLALPSGEWLMREGDPGDAMYVIKSGKLDVYVGSSLTRHVERGNAVGELALLYHTPRSASVKAVEDCELFCLQRNKFRDMLALSVSSSLVQRLAWMQAIRELEPLDQESASRLAGAFSTMHLRQGEVAVAEGGTIDRCFMIEHGTVE 858
+M+ ++D++ L +GE+LMR+G+ G+ MY+I+SG L+V + + L R + G+AVGELALL++ PRSASVKA C L+ L+R FR++ AL+ S+ LVQR+AW+ L+ LD+ +LA + T+ +R GE+ + EG DR ++E G VE
Sbjct: 1 RMDLVLDSLRCEHLAAGEYLMRQGEEGNKMYIIQSGSLEVDIDNKLVRVIGAGDAVGELALLFNAPRSASVKAQAPCVLWSLKRETFREVQALASSAQLVQRVAWLLQAPSLQGLDKVDLCKLASSLRTIPMRNGEIIINEGQRTDRLVLVESGVVE 157
BLAST of mRNA_H-elongata_contig77904.15466.1 vs. uniprot
Match: A0A7S3USL8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USL8_HETAK) HSP 1 Score: 121 bits (303), Expect = 5.500e-29 Identity = 61/132 (46.21%), Postives = 87/132 (65.91%), Query Frame = 1
Query: 460 DPGDAMYVIKSGKLDVYVGSSLTRHVERGNAVGELALLYHTPRSASVKAVEDCELFCLQRNKFRDMLALSVSSSLVQRLAWMQAIRELEPLDQESASRLAGAFSTMHLRQGEVAVAEGGTIDRCFMIEHGTV 855
+ G MYVI+SG +++ + +L R + G+AVGELALLY+ PRSASV+A E C ++ L R FR++ AL+ S L+QR+AW+ + L LD+ +LA + T LR GEV V EG DRCF++E+G V
Sbjct: 1 EEGSKMYVIQSGTMEITIDGNLIRMLSAGDAVGELALLYNAPRSASVRAAEPCVVWSLARETFREVQALASSVQLLQRVAWLLDVPTLRRLDKLDLCKLASSLRTAPLRHGEVLVTEGQATDRCFLLENGVV 132
BLAST of mRNA_H-elongata_contig77904.15466.1 vs. uniprot
Match: A0A835YLH2_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLH2_9STRA) HSP 1 Score: 120 bits (300), Expect = 9.710e-27 Identity = 87/269 (32.34%), Postives = 127/269 (47.21%), Query Frame = 1
Query: 187 SALGVVAHDTKKHRRNQIFEDGFDFTSA---GAREEMAKLKGGEVFQDGNEKLILEA-----------------METLFFVGEDCT-------EQMNALIDTMEKLALPSGEWLMREG--------------DPGDAMYVIKSGKLDVYVGSSLTRHVERGNAVGELALLYHTPRSASVKAVEDCE----LFCLQRNKFRDMLALSVSSSLVQRLAWMQAIRELEPLDQESASRLAGAFSTMHLRQGEVAVAEGGTIDRCFMIEHGTVE 858
++ G A +++RR QIF+ GFDF+ A GA + M + F N +I A M +FF G D + + L+ E+ GEWLMRE + G+ MYV+ G L+ +VG R V RG+A GELALLY PRSASV+A D L+ L+R+ FR++ A++ +++ RL + A LEP+D + S LAG + L G A E I RC +++ G +E
Sbjct: 192 ASAGATADGARRNRRAQIFQSGFDFSDAQRMGALQ-MEVDTSKDTFLPENRAIIQAATARECGDGARVRGGNAAMARVFFSGADAAGGARLQGQAFDRLLGAFERRECAPGEWLMREXXXXXXXXXXXXXXXEVGEEMYVVADGALEAFVGGDKVRDVRRGDAAGELALLYGAPRSASVRAPPDAPAAAVLWSLRRDAFREVQAVTSGAAMSARLEALAAAPALEPVDVYALSLLAGLADGVALEAGATAAVEHEVITRCILVDSGQLE 459
BLAST of mRNA_H-elongata_contig77904.15466.1 vs. uniprot
Match: A0A482RXL7_9ARCH (Cyclic nucleotide-binding domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXL7_9ARCH) HSP 1 Score: 113 bits (282), Expect = 2.040e-25 Identity = 63/192 (32.81%), Postives = 100/192 (52.08%), Query Frame = 1
Query: 283 EMAKLKGGEVFQDGNEKLILEAMETLFFV---GEDCTEQMNALIDTMEKLALPSGEWLMREGDPGDAMYVIKSGKLDVYVGSSLTRHVERGNAVGELALLYHTPRSASVKAVEDCELFCLQRNKFRDMLALSVSSSLVQRLAWMQAIRELEPLDQESASRLAGAFSTMHLRQGEVAVAEGGTIDRCFMIEHG 849
+++ L G+ D L+ A+ FF+ E+ +M LI M++ G L+ EG+ G +YV++SG LDV + S R + RG+ +GELALLY PRSA+V+ C L+ L R F+ + A+S +++ +QR W+ A EL L SRL +H G+ ++E + +IE G
Sbjct: 55 DISTLLVGDTMDDTTRSLVTNALSGFFFLQSSAEEANPKMELLIKGMKREEFDEGYTLITEGESGSKLYVVESGTLDVTINGSPIREMNRGSMLGELALLYDAPRSATVQCRTKCVLWSLSREIFKRVQAISATANQIQRARWLIASPELATLSAIDLSRLVATLQVVHFNPGDKMISEKDLTTQIILIEKG 246
BLAST of mRNA_H-elongata_contig77904.15466.1 vs. uniprot
Match: A0A7S2AR94_9STRA (cGMP-dependent protein kinase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AR94_9STRA) HSP 1 Score: 115 bits (287), Expect = 4.170e-25 Identity = 64/175 (36.57%), Postives = 100/175 (57.14%), Query Frame = 1
Query: 334 LILEAMETLFFVGEDCTEQMNALIDTMEKLALPSGEWLMREGDPGDAMYVIKSGKLDVYVGSSLTRHVERGNAVGELALLYHTPRSASVKAVEDCELFCLQRNKFRDMLALSVSSSLVQRLAWMQAIRELEPLDQESASRLAGAFSTMHLRQGEVAVAEGGTIDRCFMIEHGTVE 858
LI + +E L TE M+ ++ ++K+ L + LMR+GD GDAMY+++ GKL + VG + G+ VGELAL+++ PR+A+V+A E C+L+ L R +F ++ V S +++ R L L+ + SRLA A +R GEV EG I CF++E G +E
Sbjct: 34 LISKPLEFLISDKSFFTETMDEILSKIKKVELDRDDVLMRQGDAGDAMYILEQGKLRIIVGDKCVAFKKAGDVVGELALIFNEPRTATVEAEEPCKLWALSRVEFAELQKKKVVGSKDLICRYLREARCLNKLNDPTISRLAVAMRKRKIRDGEVLFREGDDIGECFLVEKGQLE 208
BLAST of mRNA_H-elongata_contig77904.15466.1 vs. uniprot
Match: A0A482RZV9_9ARCH (Cyclic nucleotide-binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZV9_9ARCH) HSP 1 Score: 106 bits (265), Expect = 2.200e-23 Identity = 72/223 (32.29%), Postives = 115/223 (51.57%), Query Frame = 1
Query: 202 VAHDTKKHRRNQIFEDGFDFTSAGARE--EMAKLKGGEVF--QDGNEKLILEAMETLFFVGEDCTEQMNALIDTMEKLALPSGEWLMREGDPGDAMYVIKSGKLDVYVGSSLTRHVERGNAVGELALLYHTPRSASVKAVEDCELFCLQRNKFRDMLALSVSSSLVQRLAWMQAIRELEPLDQESASRLAGAFSTMHLRQGEVAVAEGGTIDRCFMIEHGTVE 858
VA + +RR QIF +F+ R+ AK + + F Q + + EA+ GE E +N +ID M + E ++R+G+ GD + +++G +V + G GELAL+Y++PR+ASV A C+L+ L FR +LA + SS +V R +++ L+PL E S+LAGA T++ G+ V +G D F+IE G V+
Sbjct: 75 VAAPAQLNRRVQIFNASDNFSPDEKRQLPVFAKPEAAKSFLRQAIGQHYLFEAL------GE---EDINRIIDCMRPTFASADEVVIRQGELGDLFFCLETGSATAFVDNKEVMKYSAGGCFGELALIYNSPRAASVVATAACKLWTLDLRTFRYILATTSSSKMVVRCEFLKKCSFLDPLTNEQISKLAGALDTVNFEDGDYIVRQGDVADSFFIIEEGAVK 288
BLAST of mRNA_H-elongata_contig77904.15466.1 vs. uniprot
Match: A0A7S1UDS0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDS0_9STRA) HSP 1 Score: 102 bits (255), Expect = 5.400e-22 Identity = 51/165 (30.91%), Postives = 100/165 (60.61%), Query Frame = 1
Query: 364 FVGEDCTEQMNALIDTMEKLALPSGEWLMREGDPGDAMYVIKSGKLDVYVGSSLTRHVERGNAVGELALLYHTPRSASVKAVEDCELFCLQRNKFRDMLALSVSSSLVQRLAWMQAIRELEPLDQESASRLAGAFSTMHLRQGEVAVAEGGTIDRCFMIEHGTVE 858
F + +E+M+ +++ M+ LA +GE ++R+G+ G+ +V+ +G +V+V RG + GELAL+Y +PR+A+++A + +L+ L FR +LA + S+ ++ R +++ +R LEPL + +++AGA + E V +G + D+ F+I+ G V+
Sbjct: 2 FTELENSERMD-VVNAMQPLAKTAGETIIRQGEAGNEFFVLATGHCEVFVDGDRVGEYVRGGSFGELALMYDSPRAATIRATQTSKLYTLDLRTFRRILATTSSARMMNRCEFLKKVRLLEPLSNDQITKIAGALQEESFAENEYIVRQGESGDKFFIIQDGRVQ 165
BLAST of mRNA_H-elongata_contig77904.15466.1 vs. uniprot
Match: A0A094ZXP3_SCHHA (cGMP-dependent protein kinase n=1 Tax=Schistosoma haematobium TaxID=6185 RepID=A0A094ZXP3_SCHHA) HSP 1 Score: 105 bits (263), Expect = 5.960e-22 Identity = 59/182 (32.42%), Postives = 100/182 (54.95%), Query Frame = 1
Query: 310 VFQDGNEKLILEAMETLFFVGEDCTEQMNALIDTMEKLALPSGEWLMREGDPGDAMYVIKSGKLDVYVGSSLTRHVERGNAVGELALLYHTPRSASVKAVEDCELFCLQRNKFRDMLALSVSSSLVQRLAWMQAIRELEPLDQESASRLAGAFSTMHLRQGEVAVAEGGTIDRCFMIEHGTV 855
VFQ+ + LI +A+ F+ Q+ ++ M K +P G +++REG+PGDA+YV+ G L+VY ++L +E G A GELALLY+ R+ASV+AV + + L R F+ ++ S + + +++++ L+ L E +LA + GE + EG + F+I+ G V
Sbjct: 19 VFQNRSSSLIRDAISNNTFLKHLEQSQIEEIVACMYKKQIPHGCFIIREGEPGDALYVVSDGILEVYKDNALLGRMEVGRAFGELALLYNCKRTASVRAVTNASAWTLDRRTFQQIMMSSCIHRQQENMKFLKSVPALKDLSSEKMKKLADVLEPVFYETGEYIIREGELGETFFIIKSGKV 200 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77904.15466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig77904.15466.1 >prot_H-elongata_contig77904.15466.1 ID=prot_H-elongata_contig77904.15466.1|Name=mRNA_H-elongata_contig77904.15466.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=288bp KAKGEGVSNREIFDKISRAQVAIPGNNNITVINRKCRAGSHQHFRKRASTback to top mRNA from alignment at H-elongata_contig77904:164..2866+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig77904.15466.1 ID=mRNA_H-elongata_contig77904.15466.1|Name=mRNA_H-elongata_contig77904.15466.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2703bp|location=Sequence derived from alignment at H-elongata_contig77904:164..2866+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig77904:164..2866+ >mRNA_H-elongata_contig77904.15466.1 ID=mRNA_H-elongata_contig77904.15466.1|Name=mRNA_H-elongata_contig77904.15466.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1728bp|location=Sequence derived from alignment at H-elongata_contig77904:164..2866+ (Himanthalia elongata Himel1 dioecious)back to top |