prot_H-elongata_contig77899.15464.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig77899.15464.1
Unique Nameprot_H-elongata_contig77899.15464.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length101
Homology
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BLAST of mRNA_H-elongata_contig77899.15464.1 vs. uniprot
Match: D8LQL5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQL5_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 2.360e-35
Identity = 67/107 (62.62%), Postives = 73/107 (68.22%), Query Frame = 0 
Query:    2 DIKWTAGPGPAPLPYSKRAREAMGYSDHDKPWAHPDPTPPPIAEQLGVGGD-----LREGNFRTMFFLGVFVVGLILWVYRRVVYRDRTPFSHVPTTP--SHEAKVS 101
            DIKWTAGPGPAPLPYSKRAREAMG +D DKPWAHPDP   P AE  G GG      L EG  RT FFL V  +   +WVYR+VV RD +PF HV  TP  S + KVS
Sbjct:    5 DIKWTAGPGPAPLPYSKRAREAMGVTDDDKPWAHPDP---PAAESWGFGGGGESDTLTEGRLRTNFFLIVLSIIFAIWVYRKVVKRDHSPFFHVSPTPPQSEDVKVS 108
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77899.15464.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQL5_ECTSI2.360e-3562.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..76
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 77..101
NoneNo IPR availableTMHMMTMhelixcoord: 58..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77899contigH-elongata_contig77899:1806..2875 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77899.15464.1mRNA_H-elongata_contig77899.15464.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig77899 1806..2875 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig77899.15464.1 ID=prot_H-elongata_contig77899.15464.1|Name=mRNA_H-elongata_contig77899.15464.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
MDIKWTAGPGPAPLPYSKRAREAMGYSDHDKPWAHPDPTPPPIAEQLGVG
GDLREGNFRTMFFLGVFVVGLILWVYRRVVYRDRTPFSHVPTTPSHEAKV
S
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