mRNA_H-elongata_contig77898.15463.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 288 bits (737), Expect = 4.220e-92 Identity = 132/177 (74.58%), Postives = 148/177 (83.62%), Query Frame = 1
Query: 1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST*CKEAWAAITPDVIKTFFKICGLTLALDGSEDHAWCMHNFGEGYRELLQKQRVAW 531
MSFG QE WCD REC LWI +SW+LR NNGSI+ QR ILVLDDFKCH+D+ FIA L+++ NT VI IPGGLTPLLQPLDRMLNKQMKRLLRG YTA+TA A DP TGKL PP RG V+T CK AWA+ITP+ KT FKICGLTLALDGSEDHAWC+HNFG+GYRELL++QRV W
Sbjct: 337 MSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEW 513
BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5JBJ7_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ7_9PHAE) HSP 1 Score: 276 bits (706), Expect = 1.190e-91 Identity = 130/177 (73.45%), Postives = 145/177 (81.92%), Query Frame = 1
Query: 1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST*CKEAWAAITPDVIKTFFKICGLTLALDGSEDHAWCMHNFGEGYRELLQKQRVAW 531
MSFG QE W D REC WIS SW+LR NNGSII QR ILVLDDFKCH+ E FIA L++ NT VI IPGG TPLLQPLDRMLNKQMKRLLRGKYTAY+A+AVAD +GKLKPP RG+VST CK+AW +ITP+ +KT FKICGLTLALDGSEDHAWC HNFGE YR+LL++Q W
Sbjct: 1 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIIQQRLCILVLDDFKCHKGEGFIAPLKRDANTIVIFIPGGWTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKKAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQHAVW 177
BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 285 bits (729), Expect = 5.570e-91 Identity = 130/177 (73.45%), Postives = 148/177 (83.62%), Query Frame = 1
Query: 1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST*CKEAWAAITPDVIKTFFKICGLTLALDGSEDHAWCMHNFGEGYRELLQKQRVAW 531
MSFG QE WCD RE LWI +SW+LR NNGS++ QR ILVLDDFKCH+D+ FIA L+++ NT VI IPGGLTPLLQPLDRMLNKQMKRLLRG YTA+TA A DP TGKL PP RG V+T CK AWA+ITP+ +KT FKICGLTLALDGSEDHAWC+HNFG+GYRELL++QRV W
Sbjct: 330 MSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEW 506
BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 277 bits (708), Expect = 4.670e-89 Identity = 130/177 (73.45%), Postives = 145/177 (81.92%), Query Frame = 1
Query: 1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST*CKEAWAAITPDVIKTFFKICGLTLALDGSEDHAWCMHNFGEGYRELLQKQRVAW 531
MSFG QE W D REC WIS SW+LR NNGSI+ QRP ILVLDDFKCH+DE FIA L++ NT VI IPG LTPLLQPLDRMLNKQMKRLLR KYTAY+A+AVAD +GKLKPP RG+VST CKEAW + TP+ +KT F ICGLTLALDGSEDHAWC HNFGE YR+LL++QR W
Sbjct: 217 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVW 393
BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE) HSP 1 Score: 281 bits (718), Expect = 6.150e-89 Identity = 129/174 (74.14%), Postives = 143/174 (82.18%), Query Frame = 1
Query: 10 GAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST*CKEAWAAITPDVIKTFFKICGLTLALDGSEDHAWCMHNFGEGYRELLQKQRVAW 531
G QE WCD REC LWI +SW+LR NNGSI+ QR ILVLDDFKCH+D+ FIA L K+ NT VI IPGGLTPLLQPLDRMLNKQMKRLLRG YTA TA A DP TG L PP RG V+T CK AWA+ITP+ +KT FKICGLTLALDGSEDHAWC+HNFG+GYRELL++QRV W
Sbjct: 370 GVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALNKEANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTANTAKAARDPKTGNLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEW 543
BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5JTI5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI5_9PHAE) HSP 1 Score: 265 bits (678), Expect = 2.050e-88 Identity = 123/177 (69.49%), Postives = 142/177 (80.23%), Query Frame = 1
Query: 1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST*CKEAWAAITPDVIKTFFKICGLTLALDGSEDHAWCMHNFGEGYRELLQKQRVAW 531
MSFG QE W REC WIS SW+LR NNGSI+ QRP ILVLDDFKCH+ E F+A L++ NT VI IPGGLTPL+QPLDRMLNKQMKRLL GKYTAY+A+AV D +GKLKPP RG+VST CKEAW +I P+ +KT FKICGLTLALDG EDHAWC HNFGE +R+LL+++ W
Sbjct: 1 MSFGMQEKSWSYHRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKAEGFMAALKRDANTMVIFIPGGLTPLVQPLDRMLNKQMKRLLWGKYTAYSASAVIDARSGKLKPPERGVVSTWCKEAWESINPETVKTCFKICGLTLALDGGEDHAWCQHNFGEDHRDLLEERHAVW 177
BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5J8R4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R4_9PHAE) HSP 1 Score: 270 bits (691), Expect = 3.770e-88 Identity = 127/177 (71.75%), Postives = 144/177 (81.36%), Query Frame = 1
Query: 1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST*CKEAWAAITPDVIKTFFKICGLTLALDGSEDHAWCMHNFGEGYRELLQKQRVAW 531
MSFG QE W D REC W S SW+LR NNGSI+ QRP ILVLDDFKCH+DE FIA L++ NT VI IPGGLTPLLQPLD LNKQMKRLLRGK+TAY+++AVAD +GKLKPP RG+VST CKE W +ITP+ +KT FKICGLTLALDGSEDHAWC HNFGE YR+LL++Q W
Sbjct: 62 MSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLD--LNKQMKRLLRGKHTAYSSSAVADARSGKLKPPERGIVSTWCKEEWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVW 236
BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE) HSP 1 Score: 268 bits (685), Expect = 4.230e-88 Identity = 126/177 (71.19%), Postives = 142/177 (80.23%), Query Frame = 1
Query: 1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST*CKEAWAAITPDVIKTFFKICGLTLALDGSEDHAWCMHNFGEGYRELLQKQRVAW 531
+SFG QE W D REC WIS W+LR NNGSI+ QRP ILVLDDFK H+DE FIA L++ NT VI IPGGLTPLLQPLD MLNKQMKRLLRGKY AY+A+AVAD +GKLKPP RG+VST CKEAW +ITP+ +KT FKICGLTLALDGSEDHAWC HN GE YR+L ++Q W
Sbjct: 98 VSFGVQEKSWSDQRECNGWISGRWKLRPNNGSIVQQRPCILVLDDFKRHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDCMLNKQMKRLLRGKYIAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNVGEDYRDLFEEQHAVW 274
BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE) HSP 1 Score: 269 bits (688), Expect = 1.470e-87 Identity = 126/177 (71.19%), Postives = 143/177 (80.79%), Query Frame = 1
Query: 1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST*CKEAWAAITPDVIKTFFKICGLTLALDGSEDHAWCMHNFGEGYRELLQKQRVAW 531
MSFG QE W D REC WIS SW+LR NNGSI+ QRP ILVLDD KCH+ E FIA L++ NT VI IPGGLTPLLQPLDRMLNKQMKRLLRGKYTAY+ +AVAD +GKLKPP RG+VST CKEAW +ITP+ +K+ FKICGLTLALDGSEDHAWC H+FGE +LL++Q W
Sbjct: 98 MSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDVKCHKYEGFIAALKRDANTMVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSTSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKSCFKICGLTLALDGSEDHAWCDHDFGEDSHDLLEEQHAVW 274
BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Match: A0A6H5L8W0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W0_9PHAE) HSP 1 Score: 266 bits (680), Expect = 2.860e-87 Identity = 124/177 (70.06%), Postives = 141/177 (79.66%), Query Frame = 1
Query: 1 MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRDEAFIADLRKKCNTSVILIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYTATAVADPTTGKLKPPCRGMVST*CKEAWAAITPDVIKTFFKICGLTLALDGSEDHAWCMHNFGEGYRELLQKQRVAW 531
MSFG QE W D REC WIS SW+ R NNGSI+ QRP ILVLDDFKC +DE FIA L++ NT I IPGGLTPLLQPLDR+LNKQMKR+LRGKYTAY+A+AVAD +GKLKPP RG+VST C EAW +I P+ +KT FKICGLTLALDG EDHAW HNFGE YR+LL++Q W
Sbjct: 1 MSFGVQEKSWSDQRECNGWISGSWKFRPNNGSIVQQRPCILVLDDFKCRKDEGFIAALKRDANTIAIFIPGGLTPLLQPLDRVLNKQMKRMLRGKYTAYSASAVADARSGKLKPPERGVVSTWCTEAWESIIPETVKTCFKICGLTLALDGREDHAWREHNFGEDYRDLLEEQHAVW 177 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77898.15463.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig77898.15463.1 >prot_H-elongata_contig77898.15463.1 ID=prot_H-elongata_contig77898.15463.1|Name=mRNA_H-elongata_contig77898.15463.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp MSFGAQENIWCDARECTLWISESWRLRTNNGSIITQRPSILVLDDFKCHRback to top mRNA from alignment at H-elongata_contig77898:2..532- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig77898.15463.1 ID=mRNA_H-elongata_contig77898.15463.1|Name=mRNA_H-elongata_contig77898.15463.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=531bp|location=Sequence derived from alignment at H-elongata_contig77898:2..532- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig77898:2..532- >mRNA_H-elongata_contig77898.15463.1 ID=mRNA_H-elongata_contig77898.15463.1|Name=mRNA_H-elongata_contig77898.15463.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=738bp|location=Sequence derived from alignment at H-elongata_contig77898:2..532- (Himanthalia elongata Himel1 dioecious)back to top |