mRNA_H-elongata_contig77807.15457.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: D7FWX3_ECTSI (Axonemal 1-beta dynein heavy chain dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWX3_ECTSI) HSP 1 Score: 302 bits (774), Expect = 8.880e-92 Identity = 155/180 (86.11%), Postives = 166/180 (92.22%), Query Frame = 1
Query: 10 AAYRKTALLVRRSTPDSSRHWDFDDASIFAEIDAFVQRCSELLEVCESQIQLARKSTGEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLFVR 549
A YR+TALLVRRSTP+ SRHWDFD+ASIFA+IDAFVQRCSELLEVCESQIQLARK+ GE G+S LPEFGGTRGQE ITKALLGIQ+SFE QIDKLR+LDY VLDV TSRWHDDYNSFKDVVKDLEVMYTNVI+TAFEGITRITDAVALLEIF++LARRDAIKQ CLKKT TYMLFVR
Sbjct: 480 AVYRRTALLVRRSTPEPSRHWDFDEASIFAQIDAFVQRCSELLEVCESQIQLARKTMGEGGESGALPEFGGTRGQE--ITKALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSFKDVVKDLEVMYTNVINTAFEGITRITDAVALLEIFYTLARRDAIKQACLKKTAYTYMLFVR 657
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: F0YHG5_AURAN (DHC_N1 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHG5_AURAN) HSP 1 Score: 206 bits (523), Expect = 3.850e-65 Identity = 102/151 (67.55%), Postives = 127/151 (84.11%), Query Frame = 1
Query: 94 FAEIDAFVQRCSELLEVCESQIQLARKSTGEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLFV 546
FA+IDAFVQRC +LLEVCE QIQ RKS+ G+ +LP FGGTRG E ITKAL+ IQ+ FE QID+LR+LDY++LDVKTS WHDDYN FK+ VKDLEVMYTNV++TAFEG+TR+++AVA+LEIF+SLA+RDAI++ KKT + YMLF+
Sbjct: 1 FAQIDAFVQRCRDLLEVCEGQIQFCRKSSETHGRPGSLPRFGGTRGHE--ITKALIEIQDQFEQQIDRLRNLDYEILDVKTSHWHDDYNVFKNSVKDLEVMYTNVMNTAFEGVTRVSEAVAVLEIFYSLAKRDAIQRCVEKKTVDMYMLFI 149
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: A0A835Z4V1_9STRA (Dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4V1_9STRA) HSP 1 Score: 220 bits (561), Expect = 3.940e-63 Identity = 109/178 (61.24%), Postives = 136/178 (76.40%), Query Frame = 1
Query: 10 AAYRKTALLVRRSTPDSSRHWDFDDASIFAEIDAFVQRCSELLEVCESQIQLARKSTGEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLF 543
A YRKTA LV +S D +RHW FDDAS+FA+IDAF QRCS+LLE+CE Q+Q AR ++ G++ LPEFGGTRGQE + KAL GI +F +LR LDYDVLDVK RWHDD+ +F + KDLEVMY+NVI+ AF+G+ R+ DAVALLE+F++LARR IKQTCLKKT + Y+ F
Sbjct: 307 AVYRKTAALVAQSASDPARHWTFDDASLFAQIDAFAQRCSDLLELCEGQVQFARATSASRGRALDLPEFGGTRGQE--LGKALEGIAAAFGAHAARLRALDYDVLDVKIGRWHDDFATFTTLAKDLEVMYSNVINAAFDGVARVADAVALLEMFYTLARRPHIKQTCLKKTADVYVQF 482
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: A0A6H5KP60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP60_9PHAE) HSP 1 Score: 199 bits (506), Expect = 9.720e-56 Identity = 104/123 (84.55%), Postives = 111/123 (90.24%), Query Frame = 1
Query: 181 GEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLFVR 549
GE G+S LPEFGGTRGQE I+KALLGIQ+SFE QIDKLR+LDY VLDV TSRWHDDYNSFKDVVKDLEVMYTNVI+TAFEGITRI DAVALLEIF++LARRDAIKQ CLKKT TYMLFVR
Sbjct: 2 GEGGESGGLPEFGGTRGQE--ISKALLGIQDSFEAQIDKLRNLDYTVLDVTTSRWHDDYNSFKDVVKDLEVMYTNVINTAFEGITRIIDAVALLEIFYTLARRDAIKQACLKKTAYTYMLFVR 122
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: A0A2R5GWD4_9STRA (Dynein heavy chain 2, axonemal n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWD4_9STRA) HSP 1 Score: 186 bits (471), Expect = 4.980e-51 Identity = 101/179 (56.42%), Postives = 123/179 (68.72%), Query Frame = 1
Query: 16 YRKTALLVRRSTPDSSRHWDFDDASIFAEIDAFVQRCSELLEVCESQIQLARKSTG-EFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLFVR 549
Y++TA V T D S+HW+FD ASIFA++DAFVQRC +LLEVCE QIQ ARKS G LP FGGTRG E I K LL I++ F ID LR L+YDVLDVK +RWH+DYN K+ +KDLEVM NVI++AFE +T + V LLE F LA+R+AI + KKT E + LF R
Sbjct: 498 YKRTADAVAMHTKDESKHWNFDIASIFAQVDAFVQRCRDLLEVCEGQIQFARKSRDLPRGVRAPLPVFGGTRGAE--IAKQLLEIEDQFAKHIDHLRGLEYDVLDVKATRWHEDYNHLKNGMKDLEVMMQNVINSAFESVTTVAAGVDLLEAFSELAKREAITRCVTKKTAEVFQLFGR 674
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: A0A7S4EBE8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBE8_9STRA) HSP 1 Score: 177 bits (450), Expect = 2.120e-48 Identity = 94/178 (52.81%), Postives = 125/178 (70.22%), Query Frame = 1
Query: 16 YRKTALLVRRSTPDSSR-HWDFDDASIFAEIDAFVQRCSELLEVCESQIQLARKSTGEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLFV 546
Y +TA +R + P S HW FD SIFA+ DAFVQRC +LLEVCE QIQ RKS G +++ F G RGQE +TK+L+ IQ F+ QI +L L Y +LDV+ S WH+D+N FK+ VKDLEVMYTN+IS +FEG+ + +AV +L+IF SLA+RDAIK+ KK ++ Y+LF+
Sbjct: 343 YYRTAAAIRLAYPSSPELHWTFDATSIFAQTDAFVQRCRDLLEVCEGQIQFRRKSYTTAG-DNSVSFFKGLRGQE--VTKSLVAIQNQFDNQISRLCDLKYQILDVRLSHWHEDFNIFKNSVKDLEVMYTNMISASFEGVNCMAEAVGVLQIFQSLAKRDAIKRCVEKKNSDLYLLFI 517
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: A0A8J2WYK5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WYK5_9STRA) HSP 1 Score: 177 bits (450), Expect = 3.310e-48 Identity = 94/178 (52.81%), Postives = 125/178 (70.22%), Query Frame = 1
Query: 16 YRKTALLVRRSTPDSSR-HWDFDDASIFAEIDAFVQRCSELLEVCESQIQLARKSTGEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLFV 546
Y +TA +R + P S HW FD SIFA+ DAFVQRC +LLEVCE QIQ RKS G +++ F G RGQE +TK+L+ IQ F+ QI +L L Y +LDV+ S WH+D+N FK+ VKDLEVMYTN+IS +FEG+ + +AV +L+IF SLA+RDAIK+ KK ++ Y+LF+
Sbjct: 369 YYRTAAAIRLAYPSSPELHWTFDATSIFAQTDAFVQRCRDLLEVCEGQIQFRRKSYTTAG-DNSVSFFKGLRGQE--VTKSLVAIQNQFDNQISRLCDLKYQILDVRLSHWHEDFNIFKNSVKDLEVMYTNMISASFEGVNCMAEAVGVLQIFQSLAKRDAIKRCVEKKNSDLYLLFI 543
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: A0A2P4YQ39_9STRA (Dynein heavy chain (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YQ39_9STRA) HSP 1 Score: 176 bits (445), Expect = 5.460e-48 Identity = 90/176 (51.14%), Postives = 117/176 (66.48%), Query Frame = 1
Query: 16 YRKTALLVRRSTPDSSRHWDFDDASIFAEIDAFVQRCSELLEVCESQIQLARKSTGEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLF 543
YRK V + P R W+FD+ IFA+IDAFVQRC ELLEVCE QIQ ARK G GK LP FGG RG + I K+L GI+ FE +D+LR LDYD+LDVK + WH D+NSFK+ +KDLE M NVI+ AFE I+ + V ++ F +A+R+AIK+ K+T + + +F
Sbjct: 62 YRKAVKAVNAAAPSPDRRWNFDETGIFAQIDAFVQRCRELLEVCEGQIQFARKGKG--GKREDLPTFGGNRGMD--IVKSLRGIEAQFEGHVDRLRQLDYDILDVKITSWHSDFNSFKNGMKDLEAMTQNVINGAFESISTVATGVDMIRSFQKIAQREAIKRCVEKRTIDIFGMF 233
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: A0A482RZ06_9ARCH (DHC_N1 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZ06_9ARCH) HSP 1 Score: 176 bits (446), Expect = 8.900e-48 Identity = 91/176 (51.70%), Postives = 118/176 (67.05%), Query Frame = 1
Query: 16 YRKTALLVRRSTPDSSRHWDFDDASIFAEIDAFVQRCSELLEVCESQIQLARKSTGEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLF 543
Y K + R + W+ DDASIFA+IDAFVQRC +L+E+CESQ+Q RKS+ G +P FGGT+ QE I + GIQESFE I+ LR LDYDVLDVK S+WHDDYN FK+ VKDLEVM+TNV++ AFE +++ V L+E F+ LA+RD I + +K E +F
Sbjct: 436 YHKAVAAIVRQRSRYGKVWEIDDASIFAQIDAFVQRCRDLIEICESQMQFCRKSSATKGHPGPVPHFGGTKAQE--IIDGINGIQESFENHINTLRKLDYDVLDVKISKWHDDYNHFKNDVKDLEVMFTNVMNAAFEVNATVSEGVLLVETFYRLAKRDVIIRCVERKAAEINHMF 609
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Match: A0A662WW69_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WW69_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.500e-47 Identity = 89/176 (50.57%), Postives = 120/176 (68.18%), Query Frame = 1
Query: 16 YRKTALLVRRSTPDSSRHWDFDDASIFAEIDAFVQRCSELLEVCESQIQLARKSTGEFGKSHTLPEFGGTRGQEGRITKALLGIQESFEIQIDKLRHLDYDVLDVKTSRWHDDYNSFKDVVKDLEVMYTNVISTAFEGITRITDAVALLEIFFSLARRDAIKQTCLKKTNETYMLF 543
Y + ++ V + P R W+FD+ IFA+IDAFVQRC ELLEVCE QIQ ARK G+ GK LP FGG RG E I K+L GI+ FE +D+LR LDYD+LDVK + WH D+NSFK+ +KDLE M NVI+ AFE ++ ++ V +L F +A+R+AIK+ K+T + + +F
Sbjct: 363 YHRASVAVNATAPSPDRRWNFDETGIFAQIDAFVQRCRELLEVCEGQIQFARK--GKDGKREELPTFGGNRGME--IVKSLRGIEAQFEGHVDRLRKLDYDILDVKNTSWHSDFNSFKNGMKDLEAMTQNVINGAFESVSTVSAGVDMLRSFQKIAQREAIKRCVEKRTIDIFGMF 534 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77807.15457.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig77807.15457.1 >prot_H-elongata_contig77807.15457.1 ID=prot_H-elongata_contig77807.15457.1|Name=mRNA_H-elongata_contig77807.15457.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=184bp MQQAAYRKTALLVRRSTPDSSRHWDFDDASIFAEIDAFVQRCSELLEVCEback to top mRNA from alignment at H-elongata_contig77807:1039..2771+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig77807.15457.1 ID=mRNA_H-elongata_contig77807.15457.1|Name=mRNA_H-elongata_contig77807.15457.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1733bp|location=Sequence derived from alignment at H-elongata_contig77807:1039..2771+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig77807:1039..2771+ >mRNA_H-elongata_contig77807.15457.1 ID=mRNA_H-elongata_contig77807.15457.1|Name=mRNA_H-elongata_contig77807.15457.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1104bp|location=Sequence derived from alignment at H-elongata_contig77807:1039..2771+ (Himanthalia elongata Himel1 dioecious)back to top |