mRNA_H-elongata_contig77796.15455.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig77796.15455.1 vs. uniprot
Match: A0A6H5KB20_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB20_9PHAE) HSP 1 Score: 238 bits (607), Expect = 4.220e-69 Identity = 136/194 (70.10%), Postives = 148/194 (76.29%), Query Frame = 1
Query: 4 ALAEHLGVRGVQNFVFRDAVNQLEANVARYLHALSDGALLLHLSMEGDRVVKRASARAADGGFRNRSLSQLSGGQWRRASLALELAFAELTRQRSRFSCNLLVLDEALSQLDSYGRTRVCFCLLVLFIFRHYEDPSSGRSETAAHSGWLLSPPPPSSLAQPYCQSQDLPAEELQETFDHIDKIIKHQDASSVVV 585
ALAEHLG+RGVQNFVFRDAVNQLEANVARYL ALSDGAL L LSMEGDRVVKRAS RAADG FR+RSLSQLSGGQWRRASLALELAF EL RQR RFSCNLLVLDE LSQLDSYGR RV L L RH S+ A +S L+ QDLP+EELQE+FD ID+++KH+D+SSVVV
Sbjct: 1467 ALAEHLGMRGVQNFVFRDAVNQLEANVARYLDALSDGALQLRLSMEGDRVVKRASVRAADGRFRDRSLSQLSGGQWRRASLALELAFIELARQRGRFSCNLLVLDEVLSQLDSYGRERVASMLRALTHGRHAGKESNFGPTHAMYSTILVI-------------LQDLPSEELQESFDAIDQVVKHRDSSSVVV 1647
BLAST of mRNA_H-elongata_contig77796.15455.1 vs. uniprot
Match: D7FQ73_ECTSI (DNA double-strand break repair rad50 ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ73_ECTSI) HSP 1 Score: 233 bits (594), Expect = 2.360e-67 Identity = 134/194 (69.07%), Postives = 146/194 (75.26%), Query Frame = 1
Query: 4 ALAEHLGVRGVQNFVFRDAVNQLEANVARYLHALSDGALLLHLSMEGDRVVKRASARAADGGFRNRSLSQLSGGQWRRASLALELAFAELTRQRSRFSCNLLVLDEALSQLDSYGRTRVCFCLLVLFIFRHYEDPSSGRSETAAHSGWLLSPPPPSSLAQPYCQSQDLPAEELQETFDHIDKIIKHQDASSVVV 585
ALAEHLG+RGVQNFVFRDAVNQLEANVARYL ALSDGAL LHL MEGDRVVKRAS RAADG FR+RSLSQLSGGQWRRASLALELAF EL RQR RFSCNLLVLDE LSQLDSYGR RV L L R+ S A +S L+ QDLP+EELQE+FD ID+++K +D+SSVVV
Sbjct: 1455 ALAEHLGMRGVQNFVFRDAVNQLEANVARYLDALSDGALQLHLPMEGDRVVKRASVRAADGRFRDRSLSQLSGGQWRRASLALELAFIELARQRGRFSCNLLVLDEVLSQLDSYGRERVASMLRALTHGRNAGKESDFGPTHAMYSTILVI-------------LQDLPSEELQESFDAIDQVVKQRDSSSVVV 1635
BLAST of mRNA_H-elongata_contig77796.15455.1 vs. uniprot
Match: A0A4D9DAR7_9STRA (Metallophos domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAR7_9STRA) HSP 1 Score: 143 bits (361), Expect = 4.680e-36 Identity = 91/194 (46.91%), Postives = 111/194 (57.22%), Query Frame = 1
Query: 7 LAEHLGVRGVQNFVFRDAVNQLEANVARYLHALSDGALLLHLSMEGDRVVKRASARAADGGFRNRSLSQLSGGQWRRASLALELAFAELTRQRSRFSCNLLVLDEALSQLDSYGRTRVCFCLLVLFIFRHYEDPSSGRSETAAHSGWLLSPPPPSSLAQPYCQSQDLPAEELQETFDHIDKIIKHQDASSVVVD 588
L + G+RG+Q FV R AV QLE +L LS+G L L LS+EG+R+ K R DG F +R+LS LSGGQWRRASLA LAF EL+R RSR CNL+VLDE L+ LD GR RV L + E S A LS P L QD A EL++TFD ID+++K D S VV+D
Sbjct: 1158 LVDRFGMRGIQAFVLRGAVAQLERLANHFLTVLSEGGLRLGLSLEGERISKEVKVRGGDGVFHDRTLSHLSGGQWRRASLAALLAFRELSRLRSRVDCNLIVLDEVLNHLDGAGRARVGKLLRAMV---QTEGDGQEHSTPARIQMGCLSARP--GLQTAIVILQDSAAIELEDTFDSIDEVVKEGDVSRVVLD 1346
BLAST of mRNA_H-elongata_contig77796.15455.1 vs. uniprot
Match: A0A7S1GJC3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GJC3_CYCTE) HSP 1 Score: 133 bits (335), Expect = 2.190e-35 Identity = 83/197 (42.13%), Postives = 114/197 (57.87%), Query Frame = 1
Query: 1 AALAEHLGVRGVQNFVFRDAVNQLEANVARYLHALSDGALLLHLSME-GDRVVKRASARAADGGFRNRSLSQLSGGQWRRASLALELAFAELTRQRSRFSCNLLVLDEALSQLDSYGRTRVCFCLLVLFIFRHYEDPSSGRSETAAHSGWLLSPPPPSSLAQPYCQSQDLPAEELQETFDHIDKIIKHQDASSVVVD 588
++L + LG RGVQ FV ++AV LE+ YL+ LSDG+L L + ++ GDR+ ++A RA DG + R LS LSGGQWRR S+AL L F +L +R + +L+VLDE L+ LD GR+ V L L G+ TA+ +L QDL AEEL+E+FDHID+++K S VVVD
Sbjct: 54 SSLTDSLGHRGVQTFVLQNAVEALESTTQSYLNELSDGSLKLEMELDAGDRISRKAHIRAPDGSYTERPLSSLSGGQWRRFSIALNLGFVDLVARRGQMRPSLMVLDEPLTHLDRSGRSSVGSLLKALLRNDDSLSHRIGKGITASTIMLIL---------------QDLSAEELEESFDHIDEVVKLGGCSHVVVD 235
BLAST of mRNA_H-elongata_contig77796.15455.1 vs. uniprot
Match: A0A836CHZ6_9STRA (Metallophos domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ6_9STRA) HSP 1 Score: 140 bits (352), Expect = 7.660e-35 Identity = 92/221 (41.63%), Postives = 119/221 (53.85%), Query Frame = 1
Query: 28 RGVQNFVFRDAVNQLEANVARYLHALSDGALLLHLSMEGDRVVKRASARAADGGFRNRSLSQLSGGQWRRASLALELAFAELTRQRSRFSCNLLVLDEALSQLDSYGRTRVCFCLLVLFIFRHYED---------------------------------------PSSGRSETAAHSGWLLSPPPPSSLAQPYCQSQDLPAEELQETFDHIDKIIKHQDAS 573
R QNFVFR+ V QLEA A +L ALSDG L L L+++G+RV+KRA +DG R RSLSQLSGGQWRR SL+LELAFAEL RQR +CN++VLDE LSQLD+ GR RV L L HY ++GR+ A L++ + QDLPAE++ ++FD +D+++K D S
Sbjct: 1491 RAPQNFVFREGVEQLEAFAACFLDALSDGGLQLSLNLDGERVIKRAEVIGSDGQRRERSLSQLSGGQWRRVSLSLELAFAELARQRCGLACNVVVLDEVLSQLDANGRARVAQLLRHLSAEMHYRGLLHPTHTDIGHPIHRLCFLLIRNGGHSSRRLVSSAAAQLDANGRARVAHLLRRLVAAD--GGYSTVLVILQDLPAEQIIDSFDAVDEVVKRGDRS 1709
BLAST of mRNA_H-elongata_contig77796.15455.1 vs. uniprot
Match: A0A448ZKB3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKB3_9STRA) HSP 1 Score: 128 bits (322), Expect = 7.840e-31 Identity = 82/197 (41.62%), Postives = 110/197 (55.84%), Query Frame = 1
Query: 1 AALAEHLGVRGVQNFVFRDAVNQLEANVARYLHALSDGALLLHLSME-GDRVVKRASARAADGGFRNRSLSQLSGGQWRRASLALELAFAELTRQRSRFSCNLLVLDEALSQLDSYGRTRVCFCLLVLFIFRHYEDPSSGRSETAAHSGWLLSPPPPSSLAQPYCQSQDLPAEELQETFDHIDKIIKHQDASSVVVD 588
+++ E RGVQ F+ ++AVN L+ YL LSDG+ L LS+E GD++++ A R ADG FR R LS LSGGQWRR SLAL AFAEL + R +LLVLDE L+ LD GRT+ F LV I + G S + ++ QDL AEEL+E FD ID ++++ S + +D
Sbjct: 1083 SSIGERFSQRGVQTFILQNAVNSLQNTAQFYLDYLSDGSQRLELSLEAGDKILRNAFVRGADGEFRQRPLSTLSGGQWRRCSLALSFAFAELVAAKGRLRSSLLVLDEPLTHLDRSGRTK--FGKLVREILGAKQKSEKGTSGFEISTAIVI--------------LQDLSAEELEEAFDGIDTVVRNHGKSILKLD 1263
BLAST of mRNA_H-elongata_contig77796.15455.1 vs. uniprot
Match: A0A7S4JM63_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JM63_9STRA) HSP 1 Score: 125 bits (313), Expect = 8.310e-31 Identity = 80/197 (40.61%), Postives = 114/197 (57.87%), Query Frame = 1
Query: 1 AALAEHLGVRGVQNFVFRDAVNQLEANVARYLHALSDGALLLHLSME-GDRVVKRASARAADGGFRNRSLSQLSGGQWRRASLALELAFAELTRQRSRFSCNLLVLDEALSQLDSYGRTRVCFCLLVLFIFRHYEDPSSGRSETAAHSGWLLSPPPPSSLAQPYCQSQDLPAEELQETFDHIDKIIKHQDASSVVVD 588
+ALA+ G RGVQ ++ +AV+ L +L LSDGA+ L L ++ GDR+ + + R ADG ++ R+LS LSGGQWRR SLAL L F++L +R R +LLVLDE L+ LD+ GR V L + ++ A + G L S ++ QDL AEEL+E+FD ID++IK + S V V+
Sbjct: 198 SALADAFGPRGVQTYILENAVHALGFYTQSFLDELSDGAIKLDLELDAGDRIARTVAVRGADGTWQERTLSSLSGGQWRRCSLALSLGFSDLVARRGRLRPSLLVLDEPLTHLDASGRAHVGMILRKMI-----------SNQPAEYGGRL------SEVSTILIILQDLAAEELEESFDSIDEVIKEKGRSIVCVE 377
BLAST of mRNA_H-elongata_contig77796.15455.1 vs. uniprot
Match: A0A7S2KQL9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KQL9_9STRA) HSP 1 Score: 122 bits (307), Expect = 3.980e-29 Identity = 85/202 (42.08%), Postives = 110/202 (54.46%), Query Frame = 1
Query: 1 AALAEHLGVRGVQNFVFRDAVNQLEANVARYLHALSDGALLLHLSME-GDRVVKRASARAADGGFRNRSLSQLSGGQWRRASLALELAFAELTRQRSRFSCNLLVLDEALSQLDSYGRTRVCFCLLVLFIFR----HYEDPSSGRSETAAHSGWLLSPPPPSSLAQPYCQSQDLPAEELQETFDHIDKIIKHQDASSVVVDG 591
+AL+E G +GVQ FV ++AV L+ + RYL LSDG L LS+E GDR+ ++A+ DG + R LS LSGGQWRR SLAL L FAEL +R R +LLVLDE L+ LD+ GR+ V L + R H +D S L+ QDL AEEL+E FD ID++ K S V +D
Sbjct: 354 SALSEIFGSKGVQTFVLQNAVFALQLSSQRYLDELSDGTQRLELSLEAGDRIFRKAAVLGQDGQWMQRPLSALSGGQWRRCSLALTLGFAELVARRGRLRPSLLVLDEPLTHLDATGRSYVGSLLRRMLCGRLSGSHDDDGEEMNINRLCSS---------ERLSTILVILQDLAAEELEEAFDRIDEVKKENGESLVHIDA 546
BLAST of mRNA_H-elongata_contig77796.15455.1 vs. uniprot
Match: A0A7S3V904_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V904_9STRA) HSP 1 Score: 122 bits (307), Expect = 8.150e-29 Identity = 80/194 (41.24%), Postives = 114/194 (58.76%), Query Frame = 1
Query: 10 AEHLGVRGVQNFVFRDAVNQLEANVARYLHALSDGALLLHLSME-GDRVVKRASARAADGGFRNRSLSQLSGGQWRRASLALELAFAELTRQRSRFSCNLLVLDEALSQLDSYGRTRVCFCLLVLFIFRHYEDPSSGRSETAAHSGWLLSPPPPSSLAQPYCQSQDLPAEELQETFDHIDKIIKHQDASSVVVD 588
AE+ G RGVQ F+ ++ V+ L+ YL LSDG L L L+++ GD++ + AS +++G + +R LS LSGGQWRR SLAL L F++L +R + +LLVLDE L+ LDS GR V LL + + + G + G L S++ QDL AEEL E+FD ID+++K Q S VV+D
Sbjct: 1261 AENFGARGVQTFILQNTVHALQLASQSYLDELSDGTLKLQLNLDAGDKITRTASVLSSNGSWISRPLSSLSGGQWRRCSLALSLGFSDLVARRGKLCSSLLVLDEPLTHLDSSGRDNVGK-LLRKVVQKQASEQFDGEKKRI---GGL-------SVSTILIILQDLVAEELSESFDKIDEVVKCQGHSKVVID 1443
BLAST of mRNA_H-elongata_contig77796.15455.1 vs. uniprot
Match: A0A7S2V9T6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V9T6_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.170e-28 Identity = 82/187 (43.85%), Postives = 109/187 (58.29%), Query Frame = 1
Query: 22 GVRGVQNFVFRDAVNQLEANVARYLHALSDGALLLHLSM-EGDRVVKRASAR-AADGGFRNRSLSQLSGGQWRRASLALELAFAELTRQRSRFSCNLLVLDEALSQLDSYGRTRVCFCLLVLFIFRHYEDPSSGRSETAAHSGWLLSPPPPSSLAQPYCQSQDLPAEELQETFDHIDKIIKHQDASS 576
G RGVQ+FVFR+A++ L++ YL LS+G L LS+ EGDR+V+RA + ++ G R R L+ LSGGQWRR +LA++L FAEL +R +LLV+DE L+ LD GRTRV L L P S +S T +L QDL AEEL+E+FD ID ++K D SS
Sbjct: 120 GQRGVQSFVFRNALDSLQSMAQLYLTELSEGTQQLELSVDEGDRIVRRAYVKNSSTGESRQRPLASLSGGQWRRCALAVQLGFAELVARRGILRSSLLVMDEPLTHLDRGGRTRVGSVLRGLL---GGSKPLSLQSSTIV---LIL---------------QDLAAEELEESFDAIDVVVKSSDGSS 285 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77796.15455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig77796.15455.1 >prot_H-elongata_contig77796.15455.1 ID=prot_H-elongata_contig77796.15455.1|Name=mRNA_H-elongata_contig77796.15455.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp AALAEHLGVRGVQNFVFRDAVNQLEANVARYLHALSDGALLLHLSMEGDRback to top mRNA from alignment at H-elongata_contig77796:1048..2378- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig77796.15455.1 ID=mRNA_H-elongata_contig77796.15455.1|Name=mRNA_H-elongata_contig77796.15455.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1331bp|location=Sequence derived from alignment at H-elongata_contig77796:1048..2378- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig77796:1048..2378- >mRNA_H-elongata_contig77796.15455.1 ID=mRNA_H-elongata_contig77796.15455.1|Name=mRNA_H-elongata_contig77796.15455.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1188bp|location=Sequence derived from alignment at H-elongata_contig77796:1048..2378- (Himanthalia elongata Himel1 dioecious)back to top |