mRNA_H-elongata_contig77769.15453.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig77769.15453.1
Unique NamemRNA_H-elongata_contig77769.15453.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: D7FSK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK4_ECTSI)

HSP 1 Score: 324 bits (830), Expect = 8.030e-107
Identity = 164/220 (74.55%), Postives = 189/220 (85.91%), Query Frame = 1
Query:    1 QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVHVGGVEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSNAHETVPLDDDGIVFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLGRHPAVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEV 660
            +GVVAA+ KDVP GY LSFDAAI S+VPLGGGLSSSAALEVS+ATLLEEITGV VGGV+KALRCQ SDH FMG+ CGIMDQFVS+LA  G  LLVDCR+NA ETVPLDD G+VFVV ++G++H NA G Y ERV+QC+ AV+A+   RHP V+QLRDAS AWV E++ EV+EKVFKRARHVVSEDRRTLCCAMALRRKDY + GGCM+ESH SL+ +YEV
Sbjct:  110 KGVVAAFRKDVPEGYELSFDAAIASNVPLGGGLSSSAALEVSMATLLEEITGVRVGGVDKALRCQWSDHNFMGIPCGIMDQFVSALAVAGTTLLVDCRTNAFETVPLDDSGVVFVVTNTGIRHRNASGAYGERVQQCKDAVEAIKK-RHPEVEQLRDASLAWVLEVKDEVDEKVFKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESHTSLRDDYEV 328          
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: A0A6H5K3S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3S4_9PHAE)

HSP 1 Score: 300 bits (768), Expect = 2.000e-98
Identity = 161/243 (66.26%), Postives = 183/243 (75.31%), Query Frame = 1
Query:   13 AAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVHVGGVEKALRCQS-SDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSNAHETVPLDDDGIVFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLG--------------------------RHPAVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEV 660
            AA+ KDVP GY LSFDAAI S+VPLGGGLSSSAALEVS+ATLLEEITGV VGGV+KALR    SDH FMG+ CGIMDQFVS+LA  G  LLVDCR+NA ETVPLDD G+VFVV ++G++H NA G Y ERV+QC  AV+A +                            RHP V+QLRDAS AWV E+Q EV+EKVFKRARHVVSEDRRTLCCAMALRRKDY + GGCM+ESHASL+ +YEV
Sbjct:   48 AAFRKDVPEGYELSFDAAIASNVPLGGGLSSSAALEVSMATLLEEITGVRVGGVDKALRSHKWSDHNFMGIPCGIMDQFVSALAVAGTTLLVDCRTNAFETVPLDDSGVVFVVTNTGIRHRNASGAYGERVQQCRDAVEAPTKAWERKSFVPHGDAVYAHAGMDAVQIKKRHPEVEQLRDASLAWVLEVQDEVDEKVFKRARHVVSEDRRTLCCAMALRRKDYGIVGGCMTESHASLRDDYEV 290          
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: I2CP88_NANGC (Galactokinase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP88_NANGC)

HSP 1 Score: 217 bits (553), Expect = 3.520e-65
Identity = 114/220 (51.82%), Postives = 154/220 (70.00%), Query Frame = 1
Query:    1 QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVHVGGVEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSNAHETVPLDDDGIVFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLGRHPAVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEV 660
            +GVVA Y+KDVP G  L F+AA+ S VPLG GLSSSA+LEV++AT LE+I G   G + KALRCQS++HKF  V CGIMDQFVS+LA  G  LL+DCRS+    VPL D  +V +V +S +KH+     Y  RV QC+ AV+ +   ++P VK LRD +   ++ +++ ++E V++RARHV+SE+ RT     ALRR+DY   G  M+ESHASL+ +YEV
Sbjct:  111 KGVVAEYVKDVPAGKYLVFEAAVASSVPLGSGLSSSASLEVAMATFLEQILGTTPGLITKALRCQSAEHKFAHVPCGIMDQFVSALAKTGKVLLLDCRSHTETLVPLADPDLVILVTNSKVKHNLGGSEYPHRVAQCKAAVEGLQK-KYPEVKSLRDVTLEQLDSVKTSLSELVYRRARHVISENARTQAAVAALRRRDYAAVGQAMTESHASLRDDYEV 329          
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: A0A7S0H8A0_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0H8A0_9EUKA)

HSP 1 Score: 191 bits (486), Expect = 2.220e-55
Identity = 107/221 (48.42%), Postives = 143/221 (64.71%), Query Frame = 1
Query:    1 QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVHVGGVEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSN-AHETVPLDDDGIVFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLGRHPAVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEV 660
            +GVVA YL  +P G   +F+AA+ S VPLGGGLSSSA+LEV+ ATLLE + G+ V   EKALRCQ  +H F    CGIMDQ +S+   +  ALL+DCR   A E VPLDD  +V +VA+S +KH  +   Y +RV+QC+ A  A+    H  V  LRDA+PA ++     ++ +V KRA H +SED+RTL    AL+ +DY   G  M +SH SL+ +YEV
Sbjct:  105 RGVVAQYLPSLPGGSC-AFEAAVLSTVPLGGGLSSSASLEVATATLLESLYGLEVDPKEKALRCQKCEHTFCDTPCGIMDQMISACGRQSAALLIDCRPPFASEHVPLDDPDVVLLVANSNVKHKLSGSEYPDRVRQCKEACAAMRAKGHTQVHFLRDATPAMLQSCVGSLSAEVIKRASHGISEDQRTLEAKAALKARDYVRVGKLMHQSHVSLRDDYEV 324          
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: A0A6S9KLL0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KLL0_HETAK)

HSP 1 Score: 189 bits (480), Expect = 3.140e-55
Identity = 119/237 (50.21%), Postives = 145/237 (61.18%), Query Frame = 1
Query:    1 QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVHVGG-------VEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSNAHETV----PLDDDGI-VFVVADSGMKHSNADGW----YTERVKQCEVAVQAVSLGRH-PAVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEV 660
            +GVVA Y+ D+P GY + FD  I SDVPLG GLSSSAALEV+ AT LEE+    +G        V KALRCQS +HK++   CGIMDQF+S+L   G  LLVDCRS     V    P D  G  V VV +S +KH  A G     Y +RV+QC  AV A+    + P +  LRDA+   VE I+  V E V++RARHVVSED R    A ALR  DY  AG  M +SHASL+ +YEV
Sbjct:  105 RGVVAEYVPDLPAGYAMQFDLFIVSDVPLGSGLSSSAALEVATATWLEELLARDLGRAYARPSKVAKALRCQSCEHKYLNTPCGIMDQFISALGEAGKPLLVDCRSREGTPVAMAPPKDGGGQPVVVVCNSKVKHELAAGGGESPYAQRVRQCREAVAAIQQHCNLPKITHLRDATLENVEVIKGRVPEAVYRRARHVVSEDLRCQSAAAALRDGDYRAAGAAMFKSHASLRDDYEV 341          
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: A0A7S2E1C8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E1C8_9STRA)

HSP 1 Score: 187 bits (476), Expect = 8.510e-54
Identity = 104/226 (46.02%), Postives = 140/226 (61.95%), Query Frame = 1
Query:    1 QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVHVGGVEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSNAHETVPLDDDGIVFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLG-RHPAVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEVRDVTL 675
            +GVV  Y  D+P G   SF AA  SDVPLG GLSSSAALEVS ATLLE I G      EKALRCQ ++H+F  + CGIMDQF+S+       L++DCRSN   T+P   +  V +V +S +KH+ +D  Y  RV QC+ A +A++       V  LRDA+   + E++ +++   FKRARHV+SE+RR L    AL + D +  G  M +SH SL+ ++EV  V L
Sbjct:  143 KGVVKMYSADLPVGMKFSFSAAFASDVPLGAGLSSSAALEVSTATLLETILGTAPSPEEKALRCQGAEHEFCDMPCGIMDQFISARGVAQSLLMIDCRSNVGTTIPFTAEDYVVLVTNSKVKHALSDSEYPLRVAQCQTATKALAAKFGSETVTSLRDATLGMLSEVEGDLDAVSFKRARHVISENRRVLAAVAALEQSDLSAVGQLMVQSHESLRDDFEVSAVEL 368          
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: A0A7S0JH07_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JH07_9EUKA)

HSP 1 Score: 183 bits (465), Expect = 3.540e-53
Identity = 104/221 (47.06%), Postives = 144/221 (65.16%), Query Frame = 1
Query:    1 QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVHVGGVEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSN-AHETVPLDDDGIVFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLGRHPAVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEV 660
            +GVV  YL D+P G    F+AA+ + VPLGGGLSSSA+LEV+ AT+LE +  + V  + KALRCQ  +H F    CGIMDQF+S+    G ALL+DCR     E VPLDD+G+  V+A+S +KHS +   Y +RV+QC+ A  A+    HP V+ LRDA+   +  +++ ++  V +RA H +SED+RTL    AL+ +DY   G  M ESH SL+ +YEV
Sbjct:   96 RGVVFQYLPDLPGGCA-GFEAAVVTTVPLGGGLSSSASLEVATATMLEALYELRVEPLVKALRCQKCEHDFCATPCGIMDQFISACGKAGHALLIDCRKPYPTEHVPLDDEGLQIVIANSNVKHSLSGSEYPDRVRQCKEACAAMRSSGHPGVRFLRDATLEQLASVKA-LDAVVARRATHGISEDQRTLQAREALKARDYARVGQLMLESHRSLRDDYEV 314          
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: A0A7S3GMT9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GMT9_9STRA)

HSP 1 Score: 187 bits (474), Expect = 3.570e-53
Identity = 100/223 (44.84%), Postives = 150/223 (67.26%), Query Frame = 1
Query:    1 QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVH-VGGVEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSNAHETVPLD--DDGIVFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLGRHPAVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEV 660
            +G +  YL ++PPG  ++F+AAI  DVP+G GLSSSA+LEV+V+T LE +  +  V GV+KALRCQ ++H F G+ CGIMDQ++S++  EG  LL+DCR+  +  VP     +  + +V +S +KH      Y +RV+QC+ AV A+   + P VK LRDA+   +E  ++++++ V++RARH + ED+RTL    AL+ KDY   G  M+ESH SL+ +YEV
Sbjct:   97 KGAIFQYLGELPPG--IAFNAAIVGDVPIGSGLSSSASLEVAVSTFLEGLCSITTVSGVQKALRCQKAEHTFAGMPCGIMDQYISAMGQEGNLLLIDCRTTEYTLVPYGAGPEVPIILVTNSNVKHQLTGSEYPDRVRQCKEAV-ALLQKKFPQVKALRDATMEMLEATRTQMSDLVYRRARHCIGEDQRTLGAVQALKNKDYATVGRLMTESHRSLQDDYEV 316          
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: A0A7S4EVF5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EVF5_CHRCT)

HSP 1 Score: 186 bits (471), Expect = 4.100e-53
Identity = 107/228 (46.93%), Postives = 147/228 (64.47%), Query Frame = 1
Query:    1 QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVHVGGVEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSN-AHETVPLDDDGIVFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLGRHPAVKQLRDASPAWVEEIQSE--VNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEVRDVTL 675
            +GVV  YLKD+P G V  F+AA+ S+VPLGGGLSSSA++EV++ T++E +  + V   EKALRCQ  +H F    CGIMDQF+S+    G ALL+DCR     E VP+DD  +  V+A+S +KH  +   Y +RV+QC+ A  A+    H  V+ LRDA+   +E++ S   ++  V  RARHV+SED+RTL    AL+ +DY   G  M ESH SL+ +YEV  V L
Sbjct:   96 RGVVYQYLKDLPGG-VCGFEAAVLSNVPLGGGLSSSASVEVAIGTMIEGLYDLTVTPTEKALRCQKCEHDFCDTPCGIMDQFISACGKSGHALLIDCRKPYPTEHVPIDDPDLALVIANSNVKHKLSGSEYPDRVRQCKEACAAMRSAGHADVRFLRDAT---LEQLASAKGIDPVVAARARHVISEDQRTLQAKEALKARDYRRVGALMVESHRSLRDDYEVSTVEL 319          
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Match: A0A7S0SZX5_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZX5_9STRA)

HSP 1 Score: 183 bits (464), Expect = 2.360e-52
Identity = 103/227 (45.37%), Postives = 146/227 (64.32%), Query Frame = 1
Query:    1 QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEITGVH-VGGVEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSNAHET----VPLDDDGI--VFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLGRHPAVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDYNVAGGCMSESHASLKQNYEV 660
            +G +  YL D+P  +  SFDA I S+VPLG GLSSSA+LEV+ AT LE++  ++ V  VEKALRCQ ++H F    CGIMDQF+S+L  +   LL+DCRS  + T    + L+D+    + +V +S +KH  A   Y +RVKQC  AV+ +   ++P VK LRDA+   +E ++  ++E  FKRARH + ED+RTL    A+   DY  AG  M++SH SL+ +YEV
Sbjct:   70 KGTIYQYLNDLPANF--SFDAVICSNVPLGSGLSSSASLEVATATFLEKLCSINNVSKVEKALRCQQAEHTFADTPCGIMDQFISALGKDDSLLLIDCRSREYSTCELGINLEDNKTKPIVLVTNSNIKHKLAGSEYPDRVKQCNEAVKVLQ-SQYPEVKALRDATVDMLEAVKDNLSEVCFKRARHCIGEDKRTLATVKAISIGDYITAGKMMTQSHESLRDDYEV 293          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77769.15453.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSK4_ECTSI8.030e-10774.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3S4_9PHAE2.000e-9866.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
I2CP88_NANGC3.520e-6551.82Galactokinase n=1 Tax=Nannochloropsis gaditana (st... [more]
A0A7S0H8A0_9EUKA2.220e-5548.42Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A6S9KLL0_HETAK3.140e-5550.21Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2E1C8_9STRA8.510e-5446.02Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0JH07_9EUKA3.540e-5347.06Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A7S3GMT9_9STRA3.570e-5344.84Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S4EVF5_CHRCT4.100e-5346.93Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0SZX5_9STRA2.360e-5245.37Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77769contigH-elongata_contig77769:1011..2386 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score326.2
Seed ortholog evalue1.2e-86
Seed eggNOG ortholog2880.D7FSK4
Preferred nameGALK1
KEGG rclassRC00002,RC00078
KEGG koko:K00849
KEGG ReactionR01092
KEGG Pathwayko00052,ko00520,ko01100,map00052,map00520,map01100
KEGG ModuleM00554,M00632
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004335,GO:0005488,GO:0005524,GO:0005534,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006012,GO:0006059,GO:0006066,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019200,GO:0019318,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019388,GO:0019400,GO:0019402,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019751,GO:0019752,GO:0030246,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0033499,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0042866,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0048029,GO:0051186,GO:0051188,GO:0055086,GO:0061615,GO:0061620,GO:0061622,GO:0061623,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615
EggNOG free text desc.galactokinase activity
EggNOG OGsCOG0153@1,KOG0631@2759
EC2.7.1.6
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGalactokinase
Ec32 orthologEc-04_000280.1
Exons4
Model size687
Cds size687
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77769.15453.1prot_H-elongata_contig77769.15453.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig77769 1011..2386 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931183.2710261-CDS-H-elongata_contig77769:1010..11781622931183.2710261-CDS-H-elongata_contig77769:1010..1178Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77769 1011..1178 -
1691679732.1640024-CDS-H-elongata_contig77769:1010..11781691679732.1640024-CDS-H-elongata_contig77769:1010..1178Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77769 1011..1178 -
1622931183.2902398-CDS-H-elongata_contig77769:1342..14201622931183.2902398-CDS-H-elongata_contig77769:1342..1420Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77769 1343..1420 -
1691679732.178594-CDS-H-elongata_contig77769:1342..14201691679732.178594-CDS-H-elongata_contig77769:1342..1420Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77769 1343..1420 -
1622931183.3030756-CDS-H-elongata_contig77769:1721..19741622931183.3030756-CDS-H-elongata_contig77769:1721..1974Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77769 1722..1974 -
1691679732.1865199-CDS-H-elongata_contig77769:1721..19741691679732.1865199-CDS-H-elongata_contig77769:1721..1974Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77769 1722..1974 -
1622931183.3174336-CDS-H-elongata_contig77769:2198..23861622931183.3174336-CDS-H-elongata_contig77769:2198..2386Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77769 2199..2386 -
1691679732.1996768-CDS-H-elongata_contig77769:2198..23861691679732.1996768-CDS-H-elongata_contig77769:2198..2386Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77769 2199..2386 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig77769.15453.1

>prot_H-elongata_contig77769.15453.1 ID=prot_H-elongata_contig77769.15453.1|Name=mRNA_H-elongata_contig77769.15453.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=229bp
QGVVAAYLKDVPPGYVLSFDAAITSDVPLGGGLSSSAALEVSVATLLEEI
TGVHVGGVEKALRCQSSDHKFMGVLCGIMDQFVSSLASEGCALLVDCRSN
AHETVPLDDDGIVFVVADSGMKHSNADGWYTERVKQCEVAVQAVSLGRHP
AVKQLRDASPAWVEEIQSEVNEKVFKRARHVVSEDRRTLCCAMALRRKDY
NVAGGCMSESHASLKQNYEVRDVTLTLT*
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mRNA from alignment at H-elongata_contig77769:1011..2386-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig77769.15453.1 ID=mRNA_H-elongata_contig77769.15453.1|Name=mRNA_H-elongata_contig77769.15453.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1376bp|location=Sequence derived from alignment at H-elongata_contig77769:1011..2386- (Himanthalia elongata Himel1 dioecious)
CAGGGAGTGGTTGCCGCGTATCTGAAGGACGTGCCGCCCGGGTACGTCTT GAGCTTCGACGCCGCAATCACGTCCGATGTTCCGCTGGGCGGGGGGCTAT CGAGCTCGGCAGCCCTCGAGGTTTCTGTGGCTACCCTCTTGGAAGAGATT ACAGGGGTGCACGTCGGCGGGGTCGAAAAGGCGCTCAGGTGAAACAACCC AGACGGGAGGATATGCCATAATTATCCCCTGCACCGAGGGTCGAATTTTT GCTGTTGATAAAAAAACATTTAGAGCCGTGGTTGGGGCTGAGGTACGCGA ACACGAGCATGTAGTCCCCGCGTCATTATAAAAATTCGCGCTTGACCATG GGATGCGTGCGCGTTCGTTGATGGCCGCACCCGTCGACTACGCGCGCGCG CGTGCACACCAGGTGTCAGTCGTCTGATCACAAGTTCATGGGTGTTCTCT GCGGCATCATGGATCAGTTTGTGTCCTCGTTGGCCTCGGAAGGGTGTGCA CTGCTGGTGGATTGCAGGAGCAACGCGCACGAGACCGTGCCGCTCGACGA CGACGGCATCGTATTTGTCGTGGCGGATTCTGGTATGAAGCACTCTAACG CGGACGGATGGTACACGGAGAGGGTCAAGCAGTGCGAAGTCGCCGTCCAA GCGGTGAGTCTCGGGGTGCATCACCATCGGAAAGTCGCCTTCGGCGGAAG GGTCGACCGTTGGTATCGATTATTCCGCGCGATTATTTAGTGTCGTCCCG CAAGATGACGTCATTTATGATGTGGTTAATTACGTCATGGAGAACGCAGC CTCGGCGCGAAGTAACGCAACACGCTCGTCTCGTCCTTGAGGGTGCACAC CCCATCACACGATGACGATGCCCCACTTACCCGCAACGTATTAGGGCGAT GCGCAACTGCCCCAGTGATGTGTTACCTGTGACCACCACGCTTGACGCCG TTTTTAGATCAAGAAGCGGCACCCGGCCGTGAAGCAACTCCGGGACGCTT CCCCGGCGTGGGTGGAGGAAATCCAGAGTGAGGTAAATGAAAAGGTAAGG GAACAAGGGTATATGAAGACATGTTATTTTCGCTCTTTTGCCCGGGAAGG CATGAAGCGTCAGGCGCAGGAGGCTAAGACGTAACCGGGGATTGTTTAAT ACAAGCGTCGAGACGAGACTAGATGAAAGCTGGATACGCCCCCTCGCGAT GGCACCAGGTTTTTAAGCGCGCCCGACATGTTGTGTCGGAGGACAGGCGA ACGCTTTGCTGTGCGATGGCTCTTCGGCGAAAGGATTATAACGTCGCCGG AGGATGCATGAGCGAGAGTCACGCCTCCCTCAAGCAAAACTATGAGGTGC GAGATGTAACCCTAACGCTAACCTAA
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Coding sequence (CDS) from alignment at H-elongata_contig77769:1011..2386-

>mRNA_H-elongata_contig77769.15453.1 ID=mRNA_H-elongata_contig77769.15453.1|Name=mRNA_H-elongata_contig77769.15453.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1374bp|location=Sequence derived from alignment at H-elongata_contig77769:1011..2386- (Himanthalia elongata Himel1 dioecious)
CAGGGAGTGGTTGCCGCGTATCTGAAGGACGTGCCGCCCGGGTACGTCTT
GAGCTTCGACGCCGCAATCACGTCCGATGTTCCGCTGGGCGGGGGGCTAT
CGAGCTCGGCAGCCCTCGAGGTTTCTGTGGCTACCCTCTTGGAAGAGATT
ACAGGGGTGCACGTCGGCGGGGTCGAAAAGGCGCTCAGCAGGGAGTGGTT
GCCGCGTATCTGAAGGACGTGCCGCCCGGGTACGTCTTGAGCTTCGACGC
CGCAATCACGTCCGATGTTCCGCTGGGCGGGGGGCTATCGAGCTCGGCAG
CCCTCGAGGTTTCTGTGGCTACCCTCTTGGAAGAGATTACAGGGGTGCAC
GTCGGCGGGGTCGAAAAGGCGCTCAGGTGTCAGTCGTCTGATCACAAGTT
CATGGGTGTTCTCTGCGGCATCATGGATCAGTTTGTGTCCTCGTTGGCCT
CGGAAGGGTGTGCACTGCTGGTGGATTGCAGGAGCAACGCGCACGAGACC
GTGCCGCTCGACGACGACGGCATCGTATTTGTCGTGGCGGATTCTGGTAT
GAAGCACTCTAACGCGGACGGATGGTACACGGAGAGGGTCAAGCAGTGCG
AAGTCGCCGTCCAAGCGGTGAGTCTCGGGGTGTCAGTCGTCTGATCACAA
GTTCATGGGTGTTCTCTGCGGCATCATGGATCAGTTTGTGTCCTCGTTGG
CCTCGGAAGGGTGTGCACTGCTGGTGGATTGCAGGAGCAACGCGCACGAG
ACCGTGCCGCTCGACGACGACGGCATCGTATTTGTCGTGGCGGATTCTGG
TATGAAGCACTCTAACGCGGACGGATGGTACACGGAGAGGGTCAAGCAGT
GCGAAGTCGCCGTCCAAGCGGTGAGTCTCGGGCGGCACCCGGCCGTGAAG
CAACTCCGGGACGCTTCCCCGGCGTGGGTGGAGGAAATCCAGAGTGAGGT
AAATGAAAAGCGGCACCCGGCCGTGAAGCAACTCCGGGACGCTTCCCCGG
CGTGGGTGGAGGAAATCCAGAGTGAGGTAAATGAAAAGGTTTTTAAGCGC
GCCCGACATGTTGTGTCGGAGGACAGGCGAACGCTTTGCTGTGCGATGGC
TCTTCGGCGAAAGGATTATAACGTCGCCGGAGGATGCATGAGCGAGAGTC
ACGCCTCCCTCAAGCAAAACTATGAGGTGCGAGATGTAACCCTAACGCTA
ACCTAAGTTTTTAAGCGCGCCCGACATGTTGTGTCGGAGGACAGGCGAAC
GCTTTGCTGTGCGATGGCTCTTCGGCGAAAGGATTATAACGTCGCCGGAG
GATGCATGAGCGAGAGTCACGCCTCCCTCAAGCAAAACTATGAGGTGCGA
GATGTAACCCTAACGCTAACCTAA
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