mRNA_H-elongata_contig77743.15452.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig77743.15452.1 vs. uniprot
Match: D7G0N0_ECTSI (Enkurin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N0_ECTSI) HSP 1 Score: 271 bits (693), Expect = 6.560e-89 Identity = 143/234 (61.11%), Postives = 174/234 (74.36%), Query Frame = 1
Query: 37 ESIYNLLPKPKEEKKKPPIYNGNAYSTKYIPYSTFDQNKAKGDMFGIKDGSRANDPKHFLRRGEGTEARRKAGKQSEISRFEQHNECVGNKKAE----------GASGMKHGPEVLPTRRKPPVPRKDERPTMGLVSDKNFITANAVDAILATPVNRRRPPVDYLAKEDYGRVPEYLSHVKKEIDAENEMVEEFVRQQIGISSIAVEEALEMPPQEQEELVDQLKAKWDDVNAR 708
ESIYNLLP+ KEE KPP+Y ++ +PYSTFDQ KAKG MFGIK+G R+ +P+HFLR GEGTEARR+AGK+ E+ + G A G +GMK G ++LP R KPPVPR+ ERPTMGL S KNF+T+NAV+ ILA P NRRRPP+DYL KED+GRVP+YL+ V+ E+ AENEMVEEFVR+Q+GIS+IA EE EMP +EQ ELVD+LKAKWDDVN R
Sbjct: 3 ESIYNLLPEIKEETVKPPMYKATFDHSRKVPYSTFDQRKAKGGMFGIKEGKRSTEPRHFLRVGEGTEARRRAGKRPELPKIVHGLGGSGGGAARSGSSAGWASRGPTGMKRGLQLLPARMKPPVPRRGERPTMGLHSAKNFVTSNAVETILAVPANRRRPPIDYLKKEDFGRVPDYLAQVQAEVRAENEMVEEFVREQMGISAIAKEEIPEMPSEEQAELVDKLKAKWDDVNCR 236
BLAST of mRNA_H-elongata_contig77743.15452.1 vs. uniprot
Match: A0A7S1UJ87_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ87_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.770e-32 Identity = 87/237 (36.71%), Postives = 122/237 (51.48%), Query Frame = 1
Query: 37 ESIYNLLPKPKEEKKKPPIYNGN-------------AYSTKYIPYSTFDQNKAKGDMFGIKDGSRANDPKHFLRRGEGTEARRKAGKQSEISRFEQHNECVGNKKAEGASGMKHGPEVLPTRRKPPVPRKDERPTMGLVSDKNFITANAVDAILATPVNRRRPPVDYLAKEDYGRVPEYLSHVKKEIDAENEMVEEFVRQQIGISSIAVEEALEMPPQEQEELVDQLKAKWDDVNAR 708
E+IYNL+ E KPP+Y + T I + K +F ++ DPK FLR+ GTE +K R + +G + V+P KP VPR+++RP GL + KNFI +NA++AIL P + DYLAK DYG+VP YL VKKEIDAENEM++ +VR +G+ A E EM E++ L+++LKAKW+ VN+R
Sbjct: 3 ETIYNLVQTNTVEAVKPPMYRSKHDPMAPLVGSTIGTFGTTRINGAGIRVEKKDSSLFSPIQSTKP-DPKTFLRKAAGTERTQK--------RLAAGSNTLGRSTRKYEFSQPIPDPVVPP--KPSVPRREDRPIYGLTTSKNFIVSNAIEAILQVPGESKPGEPDYLAKPDYGQVPGYLEDVKKEIDAENEMIDAYVRDHLGVQEEAQEMVEEMDELERQMLIEKLKAKWEKVNSR 228
BLAST of mRNA_H-elongata_contig77743.15452.1 vs. uniprot
Match: A0A835YSE5_9STRA (Enkurin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSE5_9STRA) HSP 1 Score: 125 bits (314), Expect = 7.200e-32 Identity = 87/224 (38.84%), Postives = 115/224 (51.34%), Query Frame = 1
Query: 37 ESIYNLLPKPKEEKKKPPIYNGNAYSTKYIPYSTFDQNKAKGDMFGIKDGSRANDPKHFLRRGEGTEARRKAGKQSEISRFEQHNECVGNKKAEGASGMKHGPEVLPTRRKPPVPRKDERPTMGLVSDKNFITANAVDAILATPVNRRRPPVDYLAKEDYGRVPEYLSHVKKEIDAENEMVEEFVRQQIGISSIAVEEALEMPPQEQEELVDQLKAKWDDVNAR 708
E+I+NLLP+ + + +KPP Y +PYSTF G ++G +DG ++ P +L+RG G+ AG S R S + PE RK VP ERP MG+ +DKNFITANAV+AILA P R P +DYLAKEDYG+VP YL +K+E++ MP E+ EL+D LK+KWD VNAR
Sbjct: 7 ETIFNLLPREEVKAEKPPRYRSLFDPKSPVPYSTF--KNTGGGVYGKRDGG-SHKPDVYLKRGTGS-----AGGPSHTVR----------------STPEKRPERGEDLRKAAVPLAKERPVMGVKADKNFITANAVNAILAVPKTRTPPTIDYLAKEDYGKVPAYLGQIKEEVEP-------------------------MPEDERLELLDALKSKWDAVNAR 181
BLAST of mRNA_H-elongata_contig77743.15452.1 vs. uniprot
Match: D8LGE6_ECTSI (Enkurin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGE6_ECTSI) HSP 1 Score: 124 bits (312), Expect = 4.610e-31 Identity = 91/241 (37.76%), Postives = 122/241 (50.62%), Query Frame = 1
Query: 37 ESIYNLLPKPKEEKKKPPIYNGNAYSTKYIPYSTFDQ------------NKAKGDMFGIKDGSRANDPKHFLRRGEGTEARRKAGKQSEISRFEQHNECVGNKKAEG-ASGMKHGPE---VLPTRRKPPVPRKDERPTMGLVSDKNFITANAVDAILATPVNRRRPPVDYLAKEDYGRVPEYLSHVKKEIDAENEMVEEFVRQQIGISSIAVEEALE-MPPQEQEELVDQLKAKWDDVNAR 708
E+IY+L+P + KPP+Y + STF K FG + NDP FL++G T+ A G+K + G A K GP P RK VPR+D+ P G+VS NF+TANAVD ILA P PV+YL KEDYG+VP+YL VK EI EN M++ FVR+Q+G+ ++ LE + +E+ EL+ LKAKWD VN +
Sbjct: 3 ETIYSLVPHVPDVPVKPPMYKSRHDPVCVLAGSTFGAFGTTQPIGAAVLKKQASGTFGPPVEALRNDPAKFLKKGTKTQTGTGAS---------------GDKDSGGDAKSSKKGPAPAFTYPGERKAMVPRRDDCPVTGIVSKANFVTANAVDTILAVPRRVDLEPVNYLEKEDYGKVPKYLQQVKSEITRENAMIDMFVREQMGLEVGDDDDHLEELRERERTELLHALKAKWDTVNKK 228
BLAST of mRNA_H-elongata_contig77743.15452.1 vs. uniprot
Match: A0A8J2X2W4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X2W4_9STRA) HSP 1 Score: 124 bits (310), Expect = 6.880e-31 Identity = 86/231 (37.23%), Postives = 128/231 (55.41%), Query Frame = 1
Query: 34 LESIYNLLPKPKEEKKKPPIYN--GNAYSTKYIPYSTFDQNKAKGDMFGIKDGSRANDPKHFLRRGEGTEARRKAGKQSEISRFEQHNECVGNKKAEGASG---MKHGPEVLPTRRKPPVPRKDERPTMGLVSDKNFITANAVDAILATPVNRRRPPVDYLAKEDYGRVPEYLSHVKKEIDAENEMVEEFVRQQIGISSIAVEE-ALEMPPQEQEELVDQLKAKWDDVNAR 708
+ESIYNL+P E+ P + G Y ++Y P + G F ++ +R+ GT RR R + ++ G K + S ++ + TR K PVPR ERP +GL + KNF+TANAV+AIL P R DY+AK+DYG+VP YLS VK+EI ENEM++++V++Q+G++ AVE+ +EM P+E+ E++ LK KWD N +
Sbjct: 1 MESIYNLVP----EEYDPVKFGDKGPMYRSRYDPKAG-----VTGSTFNTHGSTKVLGAGEAVRKASGTMGRR-------TERPDPNDYLKGQTKCKKVSSRVDVQKFDRPIGTR-KEPVPRPHERPVLGLHTAKNFVTANAVEAILQVPAVRYSEEPDYMAKQDYGKVPAYLSQVKEEIKRENEMIDQYVQEQMGLAGHAVEDPGVEMDPEERTEIILALKKKWDHTNRQ 214
BLAST of mRNA_H-elongata_contig77743.15452.1 vs. uniprot
Match: A0A482SRC2_9ARCH (Enkurin domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRC2_9ARCH) HSP 1 Score: 120 bits (300), Expect = 8.010e-30 Identity = 64/126 (50.79%), Postives = 87/126 (69.05%), Query Frame = 1
Query: 340 GPEVLPTRRKPPVPRKDERPTMGLVSDKNFITANAVDAILATPVNRRRPPV---DYLAKEDYGRVPEYLSHVKKEIDAENEMVEEFVRQQIGISSIAVEEALEMPPQEQEELVDQLKAKWDDVNAR 708
GP RRK VP K E+P MG+ + KNFITANAV+AIL P +RPPV +Y+ KED+G+VP YL+ V++E+ ENEM+E +V+QQ+G E E+ E+E+L+D+LKAKWD VNA+
Sbjct: 53 GPFQYTDRRKGGVPDKSEKPIMGITTSKNFITANAVEAILQAP---KRPPVKELNYMKKEDFGKVPAYLTQVREEVRRENEMIERYVKQQMGQVERTPESFEELTRDEREQLIDELKAKWDSVNAK 175
BLAST of mRNA_H-elongata_contig77743.15452.1 vs. uniprot
Match: A0A8K1FHD5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHD5_PYTOL) HSP 1 Score: 120 bits (301), Expect = 1.970e-29 Identity = 96/240 (40.00%), Postives = 126/240 (52.50%), Query Frame = 1
Query: 31 RLESIYNLLPKPKEEKKKPPIYNGNAYSTKYIPYSTFDQNKAKGDMFGIKDGSRANDPKHFLRRGEGTEARRKAGKQSEISRFEQHNECVGNKKAEGASGMKHGPEVLPTR------RKPPVPRKDERPTMGLVSDKNFITANAVDAILATPVNRRR---PPVDYLAKEDYGRVPEYLSHVKKEIDAENEMVEEFVRQQIGISSIAVEE-----ALEMPPQEQEELVDQLKAKWDDVNAR 708
R E IYNL+PK KP Y +K+ P G FG+ +R G+ T+ R+AG ++ I R + G K P PT+ ++P V ++DE+P MGL S KNF+TANAV+AILA P R R P Y+ KEDYG+VP+YL+ VK EI+ ENEM+EEFVRQ I +EE A M +E++ LVD LKAKWD VNA+
Sbjct: 3 REECIYNLIPKVVVAPAKP-----ERYRSKHDPSVN-----PTGSTFGLHGKTRLIGSNV----GDDTKVDRRAGAKT-IGRSSDKPDPKGFTKKGERCSTTVDPAKKPTKFDYDGPKRPSVVKRDEKPIMGLKSSKNFVTANAVEAILAVPGTRARVTREPPQYVKKEDYGQVPKYLNQVKDEIERENEMIEEFVRQNKNI----MEEDEGGRAEPMDERERKHLVDALKAKWDHVNAK 223
BLAST of mRNA_H-elongata_contig77743.15452.1 vs. uniprot
Match: A0A3R7GSX4_9STRA (Enkurin domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GSX4_9STRA) HSP 1 Score: 121 bits (304), Expect = 2.360e-29 Identity = 94/247 (38.06%), Postives = 120/247 (48.58%), Query Frame = 1
Query: 31 RLESIYNLLPKPKEEKKKPPIYNGNAYSTKYIPYSTFDQNKAKGDMFGIKDGSRAN-----------------DPKHFLRRGEGTEARRKAGKQSEISRFEQHNECVGNKKAEGASGMKHGPEVLPTRRKPPVPRKDERPTMGLVSDKNFITANAVDAILATPVNRRRP---PVDYLAKEDYGRVPEYLSHVKKEIDAENEMVEEFVRQQIGISSIAVEEALE-MPPQEQEELVDQLKAKWDDVNAR 708
R E IYNL+PK + E KP Y Y P T K + G GS DPK F+R+GE R A + +S+ K G + +PPV +KD++P MGL S KNF+TANAV+ ILA P R R P Y+ KEDYG+VP YLS VK EI+ EN M+EEFVRQ + + +E M +E+ LVD LK+KWD VNA+
Sbjct: 61 REECIYNLIPKVRVEPVKPERYRSK-YDPNVQPTGTTFGVCGKTKLEGANLGSAQRYEKPASARGFGRLPAKPDPKGFIRKGE-----RSASATAVVSK-------------------KPGKFTYSGQTRPPVVKKDDKPIMGLKSAKNFVTANAVETILAVPGYRARAKNEPPQYMTKEDYGQVPRYLSQVKDEIERENSMIEEFVRQNHNLMEDDGRDRVEPMDERERLALVDALKSKWDHVNAK 282
BLAST of mRNA_H-elongata_contig77743.15452.1 vs. uniprot
Match: A0A7S3HFQ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HFQ1_9STRA) HSP 1 Score: 115 bits (287), Expect = 5.740e-29 Identity = 58/120 (48.33%), Postives = 81/120 (67.50%), Query Frame = 1
Query: 349 VLPTRRKPPVPRKDERPTMGLVSDKNFITANAVDAILATPVNRRRPPVDYLAKEDYGRVPEYLSHVKKEIDAENEMVEEFVRQQIGISSIAVEEALEMPPQEQEELVDQLKAKWDDVNAR 708
+ RRK VP K +RP MG+ + KNF+TANAV+AIL P ++Y+ KED+G++P YLS VK+EI EN+M++ +V++Q+G A E E E++ELVD LKAKWD VNA+
Sbjct: 5 IYSDRRKDTVPSKSDRPIMGITTTKNFVTANAVEAILQAPKPTGNMELNYMKKEDFGKIPAYLSQVKEEIQRENQMIDRYVKEQMGEVEEAPEVYEEFTEYERQELVDALKAKWDSVNAQ 124
BLAST of mRNA_H-elongata_contig77743.15452.1 vs. uniprot
Match: A0A662XIL3_9STRA (Enkurin domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XIL3_9STRA) HSP 1 Score: 117 bits (292), Expect = 4.530e-28 Identity = 94/243 (38.68%), Postives = 128/243 (52.67%), Query Frame = 1
Query: 31 RLESIYNLLPKPKEEKKKPPIYNGNAYSTKYIPYSTFDQNKAKGDMFGIK-----DGSRANDPKHFLR----RGEGTEARRKAGKQSEISRFEQHNECVGNKKAEGASGMKHGPEVLPTRRKPPVPRKDERPTMGLVSDKNFITANAVDAILATPVNRRR---PPVDYLAKEDYGRVPEYLSHVKKEIDAENEMVEEFVRQQIGISSIAVEE-----ALEMPPQEQEELVDQLKAKWDDVNAR 708
R E IYNL+P+P+ + KP Y +K+ P+ + G FG++ +G+ P+ + RG G K +S I + E+ V + K K + KP V RKDE+P MGL S KNF+TANAV++ILA P +R R P Y++K+DYG+VP YLS VK EI EN M+EEFVRQ + +EE A M +E+ LVD LKAKWD VN +
Sbjct: 3 RDECIYNLIPRPEVQPVKP-----ERYRSKFDPHV-----QPTGSTFGVRGKTKLEGANLGAPERLAKPSSARGFGR-VLTKPDPKSFIRKGERSATAVVSAKRTREPSSKF---TYAGQAKPAVVRKDEKPIMGLKSAKNFVTANAVESILAVPGHRARVVTEPPQYVSKQDYGQVPRYLSQVKDEIARENSMIEEFVRQNRNL----LEEDGRGRAEPMDERERLALVDSLKAKWDHVNGK 227 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77743.15452.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig77743.15452.1 >prot_H-elongata_contig77743.15452.1 ID=prot_H-elongata_contig77743.15452.1|Name=mRNA_H-elongata_contig77743.15452.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=237bp MSERGSADGGRLESIYNLLPKPKEEKKKPPIYNGNAYSTKYIPYSTFDQNback to top mRNA from alignment at H-elongata_contig77743:121..2559- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig77743.15452.1 ID=mRNA_H-elongata_contig77743.15452.1|Name=mRNA_H-elongata_contig77743.15452.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2439bp|location=Sequence derived from alignment at H-elongata_contig77743:121..2559- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig77743:121..2559- >mRNA_H-elongata_contig77743.15452.1 ID=mRNA_H-elongata_contig77743.15452.1|Name=mRNA_H-elongata_contig77743.15452.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1422bp|location=Sequence derived from alignment at H-elongata_contig77743:121..2559- (Himanthalia elongata Himel1 dioecious)back to top |