mRNA_H-elongata_contig77698.15449.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig77698.15449.1
Unique NamemRNA_H-elongata_contig77698.15449.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig77698.15449.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 513 bits (1322), Expect = 2.790e-178
Identity = 262/387 (67.70%), Postives = 300/387 (77.52%), Query Frame = 1
Query:    1 MAFGTVKKLRKALLERAGKILAERNPCASDELPVNGEELSSEQLESVTAEIFQELGNMDQTPVQHEMPVETTLEKRDAKDAHISTGGKEKERFTLCLAIMTDGSKVQLRITFKATSFNPPNKPGKGKRTQPRKGSIAAEVSPGNHTKFGHPAVGMSFGVQENSWCDARECTLWISESWRLHPNNGSIITQRPSTLVLDDFKCHRDEAFIADLWKRCNTSVILIPGGLTPLLQPLDRMLNKEMKRLLPGKYTAYTATAVADPTTGKLKPPGRGMVSTWCKEAWEAIISDVVKTCFKICGLTLALDSSEDHA*CIHNFGEGYRELLQKQRVAWEEAHPGVLLPPLQLPEVPDGESIGTKPITAAEKEVQERLLPLTGGKENDSDVELLE 1161
            MA+ TV KLR+AL++RAG+I A R+P A DE P+ GE+L+SEQL SV AE+F+ELGNMDQTPVQHE+PVETTLEK  AKDA ISTGGKEKERFTL LA+M DG KV  RI FK T F PP   GKGK T PRK S+A E+ P N  K GHPA GMSFGVQE SW D REC  WIS SW+L PNNGSI+ QRP  LVLDDFKCH+DE FIA L +  NT VI IPG LTPLLQPLDRMLNK+MKRLL  KYTAY+A+AVAD  +GKLKPP RG+VSTWCKEAWE+   + VKTCF ICGLTLALD SEDHA C HNFGE YR+LL++QR  W   H  V LPPL+LP+VP G    + PITAA+KEV+ +LLP     E+DS+VE+LE
Sbjct:   63 MAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLE 446          
BLAST of mRNA_H-elongata_contig77698.15449.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 494 bits (1271), Expect = 5.430e-169
Identity = 260/411 (63.26%), Postives = 297/411 (72.26%), Query Frame = 1
Query:    1 MAFGTVKKLRKALLERAGKILAERNPCASDELPVNGEELSSEQLESVTAEIFQELGNMDQTPVQHEMPVETTLEKRDAKDAHISTG--------------------------GKEKERFTLCLAIMTDGSKVQLRITFKATSFNPPNKPGKGKRTQPRKGSIAAEVSPGNHTKFGHPAVGMSFGVQENSWCDARECTLWISESWRLHPNNGSIITQRPSTLVLDDFKCHRDEAFIADLWKRCNTSVILIPGGLTPLLQPLDRMLNKEMKRLLPGKYTAYTATAVADPTTGKLKPPGRGMVSTWCKEAWEAIISDVVKTCFKICGLTLALDSSEDHA*CIHNFGEGYRELLQKQRVAWEEAHPGVLLPPLQLPEVPDGESIGTKPITAAEKEVQERLLPLTGGKENDSDVEL 1155
            MA+ T+ KLRKALLERAG+I A+R P A  E P+ GE+LSS QLE VT E+F++LGNMDQTPVQ+EMPVETTLEK  AKDA I+TG                          GKEKERFTLCLA+  DG+KV LRI FK T F PP  PGKGK TQPRK SIA EV P N +K G P  GMSFGVQE SWCD RE  LWI +SW+L PNNGS++ QR   LVLDDFKCH+D+ FIA L +  NT VI IPGGLTPLLQPLDRMLNK+MKRLL G YTA+TA A  DP TGKL PPGRG V+TWCK AW +I  + VKTCFKICGLTLALD SEDHA C+HNFG+GYRELL++QRV W   HP V LPPLQLP+VP  ES     I AA KE++  LLP    + +DSD+E+
Sbjct:  150 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVP-AESTANH-IEAAAKELEAGLLP----RGDDSDIEI 554          
BLAST of mRNA_H-elongata_contig77698.15449.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 488 bits (1257), Expect = 1.510e-166
Identity = 251/379 (66.23%), Postives = 284/379 (74.93%), Query Frame = 1
Query:    1 MAFGTVKKLRKALLERAGKILAERNPCASDELPVNGEELSSEQLESVTAEIFQELGNMDQTPVQHEMPVETTLEKRDAKDAHISTGGKEKERFTLCLAIMTDGSKVQLRITFKATSFNPPNKPGKGKRTQPRKGSIAAEVSPGNHTKFGHPAVGMSFGVQENSWCDARECTLWISESWRLHPNNGSIITQRPSTLVLDDFKCHRDEAFIADLWKRCNTSVILIPGGLTPLLQPLDRMLNKEMKRLLPGKYTAYTATAVADPTTGKLKPPGRGMVSTWCKEAWEAIISDVVKTCFKICGLTLALDSSEDHA*CIHNFGEGYRELLQKQRVAWEEAHPGVLLPPLQLPEVPDGESIGTKPITAAEKEVQERLLPLTGGKEN 1137
            +AF T+ KLR ALLERAG+I A RNP AS E P+ G++LS  QLESV  E+F+ELGNMDQTPVQ EMPVETTLEK  AKDA ISTGGKEKERFTLCLA+M DG KV LRI FK   F PP+   +GK TQPRKGSIAAEV P N T FG+P  GMSFGVQE SW DA ECTLW+SESW   PN+GS+I QR S LVLDDF              R NT+VILIPGGLTPLLQPLDRML+KEMKRL+  +YT Y A+A+ADP TGKL+PPGRG+VSTWCKE+W AI ++ VK CFK+CGLTLALD SED A C HNFGEGYRE+L +QR  W    PGV LPPLQLPEV    + G  PI  AEKEV  +LLP  G  ++
Sbjct:  236 LAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDF--------------RTNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSEDDAWCTHNFGEGYREVLVQQRAEWGAQRPGVTLPPLQLPEV--SSASGANPIATAEKEVTAKLLPPEGDSDD 598          
BLAST of mRNA_H-elongata_contig77698.15449.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 479 bits (1233), Expect = 2.970e-165
Identity = 252/415 (60.72%), Postives = 291/415 (70.12%), Query Frame = 1
Query:   16 VKKLRKALLERAGKILAERNPCASDELPVNGEELSSEQLESVTAEIFQELGNMDQTPVQHEMPVETTLEKRDAKDAHISTGGKEKERFTLCLAIMTDGSKVQLRITFKATSFNPPNKPGKGKRTQPRKGSIAAEVSPGNHTKFGHPAVGMSFGVQENSWCDARECTLWISESWRLHPNNGSIITQRPSTLVLDDFKCHRDEAFIADLWKRCNTSVILIPGGLTPLLQPLDRMLNKEMKRLLPGKYTAYTATAVADPTTGKLKPPGRGMVSTWCKEAWEAIISDVVKTCFKICGLTLALDSSEDHA*CIHNFGEGYRELLQKQRVAWEEAHPGVLLPPLQLPEVPDGE---------------------------------SIGTKPITAAEKEVQERLLPLTGGKENDSDVELLE 1161
            V KLR+AL++RAG+I A R+P A DE P+ GE+L+SEQL SV AE+F++LGNMDQTPVQHEMPVETTLEK  AKDA +STGG+EKERFTL LA+  DG KV LRI F  T F PP   GKGK T PRK S+A E+ P N  K GHPA GMSFGVQE SW D REC  W S SW+L PNNGSI+ QRP  LVLDDFKCH+DE FIA L +  NT VI IPGGLTPLLQPLDRMLNK+ KRLL  KYTAY+A+A  D  +GKLKPP RG+VSTWCK AWE+I  + VKTCFKICGLTLALD SEDHA C HNFGE YR+LL++Q   W   HP V LPPL+LP+VP                                       + PI AA+KEV+ +LLP     E+DS+VE+LE
Sbjct:    2 VMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASAT-DARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDSNPIMAAQKEVEGKLLPYVPD-ESDSEVEVLE 414          
BLAST of mRNA_H-elongata_contig77698.15449.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 476 bits (1226), Expect = 4.410e-162
Identity = 251/385 (65.19%), Postives = 284/385 (73.77%), Query Frame = 1
Query:    1 MAFGTVKKLRKALLERAGKILAERNPCASDELPVNGEELSSEQLESVTAEIFQELGNMDQTPVQHEMPVETTLEKRDAKDAHISTGGKEKERFTLCLAIMTDGSKVQLRITFKATSFNPPNKPGKGKRTQPRKGSIAAEVSPGNHTKFGHPAVGMSFGVQENSWCDARECTLWISESWRLHPNNGSIITQRPSTLVLDDFKCHRDEAFIADLWKRCNTSVILIPGGLTPLLQPLDRMLNKEMKRLLPGKYTAYTATAVADPTTGKLKPPGRGMVSTWCKEAWEAIISDVVKTCFKICGLTLALDSSEDHA*CIHNFGEGYRELLQKQRVAWEEAHPGVLLPPLQLPEVPDGESIGTKPITAAEKEVQERLLPLTGGKENDSDVEL 1155
            MA+ T+ KLRKALLERAGKI A+R P A  E P+ GE+LSS QLE VT E+F+ELGNMDQTPVQHE PVE  L KR  +    S     +ERFTLCLA+  DG KV LRI FK T F PP  PGKGK TQPRK SIA EV P N +K G P  GMSFGVQE SWCD REC LWI +SW+L PNNGSI+ QR   LVLDDFKCH+D+ FIA L +  NT VI IPGGLTPLLQPLDRMLNK+MKRLL G YTA+TA A  DP TGKL PPGRG V+TWCK AW +I  +  KTCFKICGLTLALD SEDHA C+HNFG+GYRELL++QRV W   HP V LPPLQLP+VP  ES     I AA KE++  LLP    + +DSD+E+
Sbjct:  187 MAWATLMKLRKALLERAGKIYAQRYPPAPGENPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHETPVER-LWKRPVRRMPASP---PEERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVP-AESTANH-IEAAAKELEAGLLP----RGDDSDIEI 561          
BLAST of mRNA_H-elongata_contig77698.15449.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 484 bits (1246), Expect = 1.350e-158
Identity = 259/441 (58.73%), Postives = 301/441 (68.25%), Query Frame = 1
Query:    1 MAFGTVKKLRKALLERAGKILAERNPCASDELPVNGEELSSEQLESVTAEIFQELGNMDQTPVQHEMPVETTLEKRDAKDAHISTGGKEKERFTLCLAIMTDGSKVQLRITFKATSFNPPNKPGKGKRTQPRKGSIAAEVSPGNHTKFGHPAVGMSFGVQENSWCDARECTLWISESWRLHPNNGSIITQRPSTLVLDDFKCHRDEAFIADLWKRCNTSVILIPGGLTPLLQPLDRMLNKEMKRLLPGKY------------------------------------------------TAYTATAVADPTTGKLKPPGRGMVSTWCKEAWEAIISDVVKTCFKICGLTLALDSSEDHA*CIHNFGEGYRELLQKQRVAWEEAHPGVLLPPLQLPEVPDGESIGTKPITAAEKEVQERLLPLTGGKENDSDVELLEYDSDLE 1179
            +AF T+ KLR ALLERAG+I A RNP AS E P+ G++L+  QLESV A++F+ELGNMDQTPVQ EMPVETTLEKR  KDA ISTGGKEK+RFT CLA+M DG KV  RI FK   F PP+  G+ K TQ RKG IAAEV   N TKFG+P  GM F VQE SWCDARECTLW+SESWR  PN+GS+I QR S LVLDDF+CHR E+F+ DL +R NT+VILIPGGLTPLLQPLDRMLNKEMKRL+ G                                                  T Y A+A+ADP TGKL+PPGRG+VST  KE+W AI  + VK CFK+CGLTLALD SED A   HNFGEGYRE+L +Q   WE  HPGV LPPLQLPEV    + G  PI  AEKEV  +LLP  G  ++D +VE+++ DSD+E
Sbjct:  132 LAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGKEKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQYMASAIADPKTGKLQPPGRGLVSTRYKESWAAITPETVKMCFKVCGLTLALDGSEDDAWGTHNFGEGYREVLVQQHAEWEAQHPGVTLPPLQLPEV--SSAPGANPIATAEKEVTAKLLPPEG--DSDDEVEIIDGDSDVE 568          
BLAST of mRNA_H-elongata_contig77698.15449.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 454 bits (1167), Expect = 1.760e-155
Identity = 233/356 (65.45%), Postives = 263/356 (73.88%), Query Frame = 1
Query:    1 MAFGTVKKLRKALLERAGKILAERNPCASDELPVNGEELSSEQLESVTAEIFQELGNMDQTPVQHEMPVETTLEKRDAKDAHISTGGKEKERFTLCLAIMTDGSKVQLRITFKATSFNPPNKPGKGKRTQPRKGSIAAEVSPGNHTKFGHPAVGMSFGVQENSWCDARECTLWISESWRLHPNNGSIITQRPSTLVLDDFKCHRDEAFIADLWKRCNTSVILIPGGLTPLLQPLDRMLNKEMKRLLPGKYTAYTATAVADPTTGKLKPPGRGMVSTWCKEAWEAI-----------------------------ISDVVKTCFKICGLTLALDSSEDHA*CIHNFGEGYRELLQKQ 981
            MA+ TV KLR+AL+ RAG+I A R+P A DE P+ GE+L+ EQL SV AE+F+ELGNMDQTPVQHEMPVETTLEK  AKDA ISTGGKEKERFTL LA+M DG KV  RI FK T F PP   GKGK T PRK S+A E+ P N  K  HPA GMSFGVQE SW D REC  WIS SW+L PNNGSI+ QRP  LVLDDFKCH+DE +IA L +  NT VI+IPGGLTPLLQPLDRMLNK+MKRLL GKYTAY+A+AVAD  +GKLKPP RG+VSTWCKEAWE+I                             + + VKTCFKICGLTLALD SEDHA C HNFGE YR+LL++Q
Sbjct:   63 MAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQ 418          
BLAST of mRNA_H-elongata_contig77698.15449.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 461 bits (1185), Expect = 1.930e-155
Identity = 249/395 (63.04%), Postives = 283/395 (71.65%), Query Frame = 1
Query:    1 MAFGTVKKLRKALLERAGKILAERNPCASDELPVNGEELSSEQLESVTAEIFQELGNMDQTPVQHEMPVETTLEKRDAKDAHISTGGKEKERFTLCLAIMTDGSKVQLRITFKATSFNPPNKPGKGKRTQPRKGSIAAEVSPGNHTKFGHPAVGMSFGVQENSWCDARECTLWISESWRL--------HPNNGSIITQRPSTLVLDDFKCHRDEAFIADLWKRCNTSVILIPGGLTPLLQPLDRMLNKEMKRLLPGKYTAYTATAVADPTTGKLKPPGRGMVSTWCKEAWEAIISDVVKTCFKICGLTLALDSSEDHA*CIHNFGEGYRELLQKQRVAWEEAHPGVLLPPLQLPEVPDGESIGTKPITAAEKEVQERLLPLTGGKENDSDVELLE 1161
            MA+ TV KLR+AL++RAG+I A R+P A DE P+ GE+L+SEQ  SV AE+F+ELGNMDQTPVQHEMPVETTLE    KDA ISTGGKEKERFTL LA+M DG  V   I FK T F PP   GKGK T PRK S+A EV P N  K GHPA GMSFGVQE SW   +EC  WI  SW+L         PNNGSI+ QRP  LVLDDFKCH+DE FIA L +  NT VI IPGGLTPLLQPLDRMLNK+MKRLL GKYTAY+A AVAD  +GKLKPP RG+VSTWCKEAWE + S+ V TCFKICGLTLALD SEDHA C     E                HP V LPPL+LP+VP+G    + PITAA+KEV+ +LLP     E+DS+VE+LE
Sbjct:  217 MAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDHA-CTPCIAE----------------HPDVTLPPLKLPKVPEG--FDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLE 591          
BLAST of mRNA_H-elongata_contig77698.15449.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 456 bits (1173), Expect = 5.350e-154
Identity = 243/385 (63.12%), Postives = 273/385 (70.91%), Query Frame = 1
Query:    1 MAFGTVKKLRKALLERAGKILAERNPCASDELPVNGEELSSEQLESVTAEIFQELGNMDQTPVQHEMPVETTLEKRDAKDAHISTGGKEKERFTLCLAIMTDGSKVQLRITFKATSFNPPNKPGKGKRTQPRKGSIAAEVSPGNHTKFGHPAVGMSFGVQENSWCDARECTLWISESWRLHPNNGSIITQRPSTLVLDDFKCHRDEAFIADLWKRCNTSVILIPGGLTPLLQPLDRMLNKEMKRLLPGKYTAYTATAVADPTTGKLKPPGRGMVSTWCKEAWEAIISDVVKTCFKICGLTLALDSSEDHA*CIHNFGEGYRELLQKQRVAWEEAHPGVLLPPLQLPEVPDGESIGTKPITAAEKEVQERLLPLTGGKENDSDVEL 1155
            MA+ T+ KLRKALLERAG+I A+R P A  E P+ GE+LSS QLE VT E+F+ELGNMDQTPVQHE         RDA       GGKEKERFTLCLA+  DG KV LRI FK T F PP  PGKGK TQPRK SIA EV P N +K G P  GMSFGVQE SWCD REC LWI  SW+L PNNGSI+ QR   LVLDDFKCH+D+ FIA L +  NT VI IPGGLTPLLQ LDRMLNK+MKRLL              P TGKL PPGRG V+TWCK AW +I  + VKTCFKICGLTLALD SEDHA C+HNFG+GYRELL++QRV W   HP V LPPLQLP+VP  ES     I AA KE++  LLP    + +DSD+E+
Sbjct:  204 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHE---------RDA-------GGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVP-AESTANH-IEAAAKELEAELLP----RGDDSDIEI 566          
BLAST of mRNA_H-elongata_contig77698.15449.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 457 bits (1175), Expect = 2.850e-153
Identity = 248/400 (62.00%), Postives = 288/400 (72.00%), Query Frame = 1
Query:    1 MAFGTVKKLRKALLERAGKILAERNPCASDELPVNGEELSSEQLESVTAEIFQELGNMDQTPVQHEMPVETTLEKRDAKDAHISTGGKEKERFTLCLAIMTDGSKVQLRITFKATSFNPPNKPGKGKRTQPRKGSIAAEVSPGNHTKFG---------HPAV---GMSF-GVQENSWCDARECTLWISESWRLHPNNGSIITQRPSTLVLDDFKCHRDEAFIADLWKRCNTSVILIPGGLTPLLQPLDRMLNKEMKRLLPGKYTAYTATAVADPTTGKLKPPGRGMVSTWCKEAWEAIISDVVKTCFKICGLTLALDSSEDHA*CIHNFGEGYRELLQKQRVAWEEAHPGVLLPPLQLPEVPDGESIGTKPITAAEKEVQERLLPLTGGKENDSDVELLE 1161
            MA+ TV KLR+AL++RAG+I A R+P A DE P+ GE+L+SEQL SV AE+F+ELGNMDQTPVQHEMPVETTLEK  AKDA ISTGG+EKERFTL LA+M DG KV  RI FK T F PP   GK K T PRK S+A E+   N  + G          P +   G  F    E SW D REC  WI  SW+L PNNGSI+ QRP  LVLDDFKCH+DE FIA L KR   +VI IPGGLT LLQPLDRMLNK+MKRLL GKYTA +A+AVAD  +GKL PP  G+VSTWCKEAWE+I S  V+TCFKICGLTLALD SE HA C HNFGE Y +LL++Q   W   HP   LPPL+LP+VP G    + PITAA+KEV+ +LLP     E+DS+VE+LE
Sbjct:  245 MAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAAL-KRGAKTVIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGKLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSEHHAWCEHNFGEDYGDLLEEQHAVWLAEHPDDTLPPLKLPKVPGG--FDSNPITAAQKEVEGKLLPYVAD-ESDSEVEVLE 640          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77698.15449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6L9_9PHAE2.790e-17867.70DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE5.430e-16963.26DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE1.510e-16666.23DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE2.970e-16560.72DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ1_9PHAE4.410e-16265.19DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE1.350e-15858.73Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JUK2_9PHAE1.760e-15565.45DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JTG5_9PHAE1.930e-15563.04DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KEE8_9PHAE5.350e-15463.12DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5KRZ8_9PHAE2.850e-15362.00DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77698contigH-elongata_contig77698:210..1633 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score357.8
Seed ortholog evalue5e-96
Seed eggNOG ortholog2880.D7FXD3
Preferred namePOGK
KEGG koko:K09228
EggNOG free text desc.DNA binding
EggNOG OGsKOG3105@1,KOG3105@2759
COG Functional cat.CH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Hectar predicted targeting categoryother localisation
Exons2
Model size1197
Cds size933
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77698.15449.1prot_H-elongata_contig77698.15449.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig77698 474..1633 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931182.9138346-UTR-H-elongata_contig77698:209..4731622931182.9138346-UTR-H-elongata_contig77698:209..473Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig77698 210..473 -
1691679732.0072875-UTR-H-elongata_contig77698:209..4731691679732.0072875-UTR-H-elongata_contig77698:209..473Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig77698 210..473 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931182.931277-CDS-H-elongata_contig77698:473..11471622931182.931277-CDS-H-elongata_contig77698:473..1147Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77698 474..1147 -
1691679732.020346-CDS-H-elongata_contig77698:473..11471691679732.020346-CDS-H-elongata_contig77698:473..1147Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77698 474..1147 -
1622931182.9469044-CDS-H-elongata_contig77698:1374..16331622931182.9469044-CDS-H-elongata_contig77698:1374..1633Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77698 1375..1633 -
1691679732.0306666-CDS-H-elongata_contig77698:1374..16331691679732.0306666-CDS-H-elongata_contig77698:1374..1633Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig77698 1375..1633 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig77698.15449.1

>prot_H-elongata_contig77698.15449.1 ID=prot_H-elongata_contig77698.15449.1|Name=mRNA_H-elongata_contig77698.15449.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=311bp
MAFGTVKKLRKALLERAGKILAERNPCASDELPVNGEELSSEQLESVTAE
IFQELGNMDQTPVQHEMPVETTLEKRDAKDAHISTGGKEKERFTLCLAIM
TDGSKVQLRITFKATSFNPPNKPGKGKRTQPRKGSIAAEVSPGNHTKFGH
PAVGMSFGVQENSWCDARECTLWISESWRLHPNNGSIITQRPSTLVLDDF
KCHRDEAFIADLWKRCNTSVILIPGGLTPLLQPLDRMLNKEMKRLLPGKY
TAYTATAVADPTTGKLKPPGRGMVSTWCKEAWEAIISDVVKTCFKICGLT
LALDSSEDHA*
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mRNA from alignment at H-elongata_contig77698:210..1633-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig77698.15449.1 ID=mRNA_H-elongata_contig77698.15449.1|Name=mRNA_H-elongata_contig77698.15449.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1424bp|location=Sequence derived from alignment at H-elongata_contig77698:210..1633- (Himanthalia elongata Himel1 dioecious)
ATGGCATTTGGAACAGTGAAGAAGCTTCGGAAGGCCCTCCTGGAACGCGC TGGCAAAATCTTGGCTGAGCGCAACCCGTGTGCTTCTGATGAGCTCCCCG TGAACGGGGAGGAGCTGAGTTCCGAGCAGCTGGAGTCGGTGACGGCGGAA ATTTTCCAAGAACTCGGCAATATGGACCAGACTCCCGTCCAGCACGAGAT GCCGGTGGAGACAACTCTGGAGAAGCGTGATGCGAAGGATGCTCACATCA GCACAGGAGGTGAGAGTATTGCGGCTGCGTGCTTGTCGATAGTATGTATT TTGCATTGTTTTAATGTTTTTATTGTACGGTTGCTGCTGCTGCTGCTGCC ACAACGCGATTTTTTTTTCTCTAGATGATAGGTTTTTGGCATCGTAAAAT GCCCCCGCATCGTGAATACGAAGTATAAATCAAAACATGCAACTGTAACC CCCTCCCGCCCTCTCTTTGTATCGACTCCCTGGTAGGTAAGGAGAAGGAG CGCTTCACTCTCTGTCTTGCTATCATGACGGACGGCAGCAAGGTTCAGCT ACGCATCACCTTCAAAGCCACGTCGTTCAACCCGCCGAACAAACCGGGAA AGGGCAAGAGAACTCAGCCGCGGAAGGGGTCCATCGCGGCAGAGGTTTCC CCTGGAAATCATACCAAGTTCGGGCACCCCGCGGTCGGCATGTCGTTTGG TGTGCAGGAGAATAGCTGGTGTGACGCGCGGGAGTGCACCCTTTGGATCT CGGAGAGCTGGAGGCTTCACCCCAACAACGGAAGCATCATCACGCAGCGC CCGAGCACCCTGGTGTTGGACGACTTCAAGTGCCATCGTGACGAGGCCTT CATTGCTGACCTCTGGAAGAGGTGCAACACCAGCGTCATCCTGATCCCGG GCGGGTTGACTCCTCTCCTCCAGCCACTGGACCGCATGCTCAACAAGGAG ATGAAACGGCTACTGCCGGGGAAGTACACCGCCTACACTGCCACAGCGGT TGCCGACCCAACTACGGGCAAGCTGAAGCCGCCGGGCCGTGGGATGGTGT CCACGTGGTGCAAGGAGGCGTGGGAAGCCATCATCTCCGACGTGGTCAAG ACTTGCTTCAAGATCTGCGGTCTTACGCTTGCGCTTGACAGCAGCGAGGA CCACGCCTGATGCATACACAACTTCGGTGAGGGTTACCGTGAGCTGCTTC AGAAGCAGCGCGTTGCGTGGGAGGAAGCACACCCCGGCGTTTTGCTGCCC CCGCTCCAGCTACCAGAGGTACCCGACGGCGAGTCGATCGGTACCAAACC CATTACGGCTGCAGAGAAGGAGGTTCAAGAACGTCTGCTACCTCTTACCG GTGGGAAGGAAAACGACAGCGATGTAGAGCTGCTGGAATATGACAGCGAT CTAGAGTGTGGGCGTGTCGGGGGA
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Coding sequence (CDS) from alignment at H-elongata_contig77698:210..1633-

>mRNA_H-elongata_contig77698.15449.1 ID=mRNA_H-elongata_contig77698.15449.1|Name=mRNA_H-elongata_contig77698.15449.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1866bp|location=Sequence derived from alignment at H-elongata_contig77698:210..1633- (Himanthalia elongata Himel1 dioecious)
ATGGCATTTGGAACAGTGAAGAAGCTTCGGAAGGCCCTCCTGGAACGCGC
TGGCAAAATCTTGGCTGAGCGCAACCCGTGTGCTTCTGATGAGCTCCCCG
TGAACGGGGAGGAGCTGAGTTCCGAGCAGCTGGAGTCGGTGACGGCGGAA
ATTTTCCAAGAACTCGGCAATATGGACCAGACTCCCGTCCAGCACGAGAT
GCCGGTGGAGACAACTCTGGAGAAGCGTGATGCGAAGGATGCTCACATCA
GCACAGGAGATGGCATTTGGAACAGTGAAGAAGCTTCGGAAGGCCCTCCT
GGAACGCGCTGGCAAAATCTTGGCTGAGCGCAACCCGTGTGCTTCTGATG
AGCTCCCCGTGAACGGGGAGGAGCTGAGTTCCGAGCAGCTGGAGTCGGTG
ACGGCGGAAATTTTCCAAGAACTCGGCAATATGGACCAGACTCCCGTCCA
GCACGAGATGCCGGTGGAGACAACTCTGGAGAAGCGTGATGCGAAGGATG
CTCACATCAGCACAGGAGGTAAGGAGAAGGAGCGCTTCACTCTCTGTCTT
GCTATCATGACGGACGGCAGCAAGGTTCAGCTACGCATCACCTTCAAAGC
CACGTCGTTCAACCCGCCGAACAAACCGGGAAAGGGCAAGAGAACTCAGC
CGCGGAAGGGGTCCATCGCGGCAGAGGTTTCCCCTGGAAATCATACCAAG
TTCGGGCACCCCGCGGTCGGCATGTCGTTTGGTGTGCAGGAGAATAGCTG
GTGTGACGCGCGGGAGTGCACCCTTTGGATCTCGGAGAGCTGGAGGCTTC
ACCCCAACAACGGAAGCATCATCACGCAGCGCCCGAGCACCCTGGTGTTG
GACGACTTCAAGTGCCATCGTGACGAGGCCTTCATTGCTGACCTCTGGAA
GAGGTGCAACACCAGCGTCATCCTGATCCCGGGCGGGTTGACTCCTCTCC
TCCAGCCACTGGACCGCATGCTCAACAAGGAGATGAAACGGCTACTGCCG
GGGAAGTACACCGCCTACACTGCCACAGCGGTTGCCGACCCAACTACGGG
CAAGCTGAAGCCGCCGGGCCGTGGGATGGTGTCCACGTGGTGCAAGGAGG
CGTGGGAAGCCATCATCTCCGACGTGGTCAAGACTTGCTTCAAGATCTGC
GGTCTTACGCTTGCGCTTGACAGCAGCGAGGACCACGCCTGAGTAAGGAG
AAGGAGCGCTTCACTCTCTGTCTTGCTATCATGACGGACGGCAGCAAGGT
TCAGCTACGCATCACCTTCAAAGCCACGTCGTTCAACCCGCCGAACAAAC
CGGGAAAGGGCAAGAGAACTCAGCCGCGGAAGGGGTCCATCGCGGCAGAG
GTTTCCCCTGGAAATCATACCAAGTTCGGGCACCCCGCGGTCGGCATGTC
GTTTGGTGTGCAGGAGAATAGCTGGTGTGACGCGCGGGAGTGCACCCTTT
GGATCTCGGAGAGCTGGAGGCTTCACCCCAACAACGGAAGCATCATCACG
CAGCGCCCGAGCACCCTGGTGTTGGACGACTTCAAGTGCCATCGTGACGA
GGCCTTCATTGCTGACCTCTGGAAGAGGTGCAACACCAGCGTCATCCTGA
TCCCGGGCGGGTTGACTCCTCTCCTCCAGCCACTGGACCGCATGCTCAAC
AAGGAGATGAAACGGCTACTGCCGGGGAAGTACACCGCCTACACTGCCAC
AGCGGTTGCCGACCCAACTACGGGCAAGCTGAAGCCGCCGGGCCGTGGGA
TGGTGTCCACGTGGTGCAAGGAGGCGTGGGAAGCCATCATCTCCGACGTG
GTCAAGACTTGCTTCAAGATCTGCGGTCTTACGCTTGCGCTTGACAGCAG
CGAGGACCACGCCTGA
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