mRNA_H-elongata_contig77629.15446.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: D8LPR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR2_ECTSI) HSP 1 Score: 537 bits (1383), Expect = 1.340e-189 Identity = 253/285 (88.77%), Postives = 274/285 (96.14%), Query Frame = 1
Query: 4 EGLLRQKNQLDAYVAWHRRQGLAPSLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWDQHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAATTNR 858
EGLLRQKNQLDAYVAWHR+QGLAPSL+E+M++PSTNERWA +G+ G L GAPKVTVILNLF REVLTEQLDSLF+QTTASHI+EVWVCVFSAPAQDYALRVVK+SKYKNVRLVVSD+NFKFYGRFQMALTAPTDFVWL+DDDMIPGNKYL QLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWDQ AVPVDYLCSQWFLRPEWLQ MWSERPMTFETGEDFH+SHTMRKYANIGTYVMP++ +D ETKGSK+RGLSF++AAT++R
Sbjct: 177 EGLLRQKNQLDAYVAWHRQQGLAPSLDEMMSMPSTNERWAVEGRTGGLKGAPKVTVILNLFMREVLTEQLDSLFAQTTASHIAEVWVCVFSAPAQDYALRVVKESKYKNVRLVVSDFNFKFYGRFQMALTAPTDFVWLIDDDMIPGNKYLGQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWDQDSAVPVDYLCSQWFLRPEWLQHMWSERPMTFETGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATSSR 461
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: A0A6H5KPH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPH5_9PHAE) HSP 1 Score: 537 bits (1384), Expect = 5.710e-182 Identity = 253/283 (89.40%), Postives = 274/283 (96.82%), Query Frame = 1
Query: 4 EGLLRQKNQLDAYVAWHRRQGLAPSLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWDQHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAATT 852
EGLLRQKNQLDAYVAWHR+QGLAPSL+ELM++PSTNERWA++G+ G L GAPKVTVILNLF REVLTEQLDSLF+QTTASHI+EVWVCVFSAPAQDYALRVVK+SKYKNVRLVVSD+NFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYL QLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWDQ +AVPVDYLCSQWFLRPEWLQ MWSERPMTFETGEDFH+SHT+RKYANIGTYVMP++ +D ETKGSK+RGLSF++AAT+
Sbjct: 191 EGLLRQKNQLDAYVAWHRQQGLAPSLDELMSMPSTNERWAQEGRTGGLKGAPKVTVILNLFMREVLTEQLDSLFAQTTASHIAEVWVCVFSAPAQDYALRVVKESKYKNVRLVVSDFNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLGQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGSHGGMYMPDYYWDQDNAVPVDYLCSQWFLRPEWLQHMWSERPMTFETGEDFHVSHTLRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATS 473
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: A0A1J3I729_NOCCA (Uncharacterized protein (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3I729_NOCCA) HSP 1 Score: 220 bits (560), Expect = 2.690e-66 Identity = 122/284 (42.96%), Postives = 172/284 (60.56%), Query Frame = 1
Query: 10 LLRQKNQLDAYVAWHRRQGL-APSLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAAT 849
+++ K +L V +++ L + SL ELM + S +WA +G P PKVTVILN FKR+ L QLDSL QT H VWV F +P + R+ + + S+Y+FK+YGRFQ+AL D V+++DDDMIPG K L L H AGTE +S+LGSIGR+LP +D + SYRK+ S G+Y+PD +D + VD+L S WFL E ++ ++ E+P TF TGED H+S+ ++KY N G++V+P DPND ET G L+++S T
Sbjct: 45 MIKMKRELYEDVLGFQKKNLGSESLEELMKMKS---KWALNG-----PTKPKVTVILNHFKRKTLCAQLDSLLHQTLPFH--HVWVLAFGSPNEASLRRIAGSYNDSRISFISSNYDFKYYGRFQIALQTEADLVYVIDDDMIPGKKMLQMLSHVAGTEKYENSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITLDRILQVDFLSSSWFLSAELVKALFIEKPFTFATGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETT 318
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: Q9FF50_ARATH (Glycosyltransferase family protein 2 n=41 Tax=Brassicaceae TaxID=3700 RepID=Q9FF50_ARATH) HSP 1 Score: 224 bits (570), Expect = 2.340e-63 Identity = 124/286 (43.36%), Postives = 174/286 (60.84%), Query Frame = 1
Query: 4 EGLLRQKNQLDAYVAWHRRQGL-APSLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAAT 849
E +++ K +L V ++R+ L + SL ELM + S +WA +G P PKVTVILN FKR+ L QLDSL QT H VWV F +P + R+ + + S+Y+FK+YGRFQ+AL D V+++DDDMIPG K L L H AGTE +S+LGSIGR+LP +D + SYRK+ S G+Y+PD +D + VD+L S WFL E ++ ++ E+P TF TGED H+S+ ++KY N G++V+P DPND ET G L+++S T
Sbjct: 132 EKMIKMKRELYDDVLGYQRKNLGSESLEELMKMKS---KWALNG-----PNKPKVTVILNHFKRKTLCAQLDSLLHQTLPFH--HVWVLAFGSPNEASLRRIAGSYNDSRISFISSNYDFKYYGRFQIALQTEADLVYILDDDMIPGKKMLQMLSHVAGTEKYENSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITLDRILQVDFLSSSWFLSAELVKALFIEKPFTFSTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETT 407
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: A0A7N0TYA9_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TYA9_KALFE) HSP 1 Score: 223 bits (567), Expect = 6.600e-63 Identity = 122/261 (46.74%), Postives = 161/261 (61.69%), Query Frame = 1
Query: 76 SLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAAT 849
+L+ELM + S RW +G P PKVTVILN FKR+ L QLDSL QT H VWV F +P + R+V + + S Y+FK+YGRFQMAL +D V++VDDDMIPG K L L H AGTE +S+LGSIGR+LP +D + SYRK+ S G+Y+PD +D V VD+L S WFL E ++ ++ E PMTF TGED H+S+T++KY N G+YV+P D +D ET G L+++S T
Sbjct: 166 TLDELMRMKS---RWDLNG-----PNKPKVTVILNHFKRKTLCAQLDSLLRQTLGFH--HVWVLAFGSPNANTLSRIVSSYNDSRISFISSQYDFKYYGRFQMALQTESDLVYIVDDDMIPGTKMLQILSHVAGTEKYRNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDIIVDKIVQVDFLSSSWFLSAELIRTLFVEAPMTFMTGEDLHLSYTLQKYRNAGSYVLPVDASDKETWGDSEHRLAYVSETT 416
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: A0A6P5H2H3_ANACO (uncharacterized protein LOC109728978 n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5H2H3_ANACO) HSP 1 Score: 222 bits (565), Expect = 1.130e-62 Identity = 122/284 (42.96%), Postives = 172/284 (60.56%), Query Frame = 1
Query: 10 LLRQKNQL-DAYVAWHRRQGLAPSLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAAT 849
++R K +L D +A+ ++ +L ELM + S +W+ G P PK+TVILN +KR+ L QLDSL QT H VWV F +P + R+V+ + V S Y+FK+YGRFQMAL +DFV+++DDDMIPG + L L H GTE +S+LGSIGR+LP +D SYRK+ S G+Y+PD +D V VD+L S WFL + ++ ++ E+P TF TGED H+S+ ++KY N G+YV+P DPND ET G L+++S T
Sbjct: 129 MIRLKRELYDEILAFQKKSSGTETLGELMRMKS---KWSAHG-----PSIPKITVILNHYKRKTLCAQLDSLLHQTLPFH--HVWVLSFGSPNELSLRRIVESYNNSRISFVSSTYDFKYYGRFQMALQTESDFVYILDDDMIPGKRMLEILAHVGGTEKYKNSVLGSIGRILPFRQKDFMFPSYRKFKSKEAGLYLPDPAYDITVERIVQVDFLSSSWFLPTDLVKTLFIEKPFTFATGEDLHLSYQLQKYRNAGSYVLPVDPNDRETWGDSEHRLAYVSETT 402
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: A0A8B8ZHF4_PHODC (uncharacterized protein LOC103719835 n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B8ZHF4_PHODC) HSP 1 Score: 221 bits (564), Expect = 1.520e-62 Identity = 122/284 (42.96%), Postives = 172/284 (60.56%), Query Frame = 1
Query: 10 LLRQKNQL-DAYVAWHRRQGLAPSLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAAT 849
++R K +L D + + ++ +L ELM + S +W+ G P PK+TVILN FKR+ L QLDSL +QT H VWV F +P + R+V+ + + + S Y+FK+YGRFQMAL DFV+++DDDMIPG K L L H GTE +S+LGSIGR+LP +D + SYRK+ S G+Y+PD +D V VD+L S WFL E ++ ++ E P TF TGED H+S+ ++KY N G++V+P DPND ET G L+++S T
Sbjct: 127 MIRLKRELYDEVLEFQKKNSGTETLAELMRMES---KWSPRG-----PNVPKITVILNHFKRKTLCAQLDSLLNQTLPFH--HVWVLSFGSPNELSLKRIVESYNHPRISFISSGYDFKYYGRFQMALQTEADFVYILDDDMIPGKKMLEILAHVGGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVERIVQVDFLSSSWFLSAELVKALFIETPFTFMTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETT 400
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: A0A067LHF7_JATCU (Uncharacterized protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067LHF7_JATCU) HSP 1 Score: 221 bits (563), Expect = 2.210e-62 Identity = 121/261 (46.36%), Postives = 161/261 (61.69%), Query Frame = 1
Query: 76 SLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWDQ--HHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAAT 849
+L+ELM++ S +W G P PKVTVILN FKR+ L QLDSL QT H VWV F +P + R+V+ + + S Y+FK+YGRFQMAL D V++VDDDMIPG K L L H AGTE +S+LGSIGR+LP +D + SYRK+ S G+Y+PD +D V VD+L S WFL E ++ ++ E PMTF TGED H+S+ ++KY N G++V+P DPND ET G L+++S T
Sbjct: 156 TLSELMSMKS---KWDLHG-----PNKPKVTVILNHFKRKTLCAQLDSLLQQTLPFH--HVWVLAFGSPNEVSLKRIVQSYNDSRISFISSSYDFKYYGRFQMALQTEADLVYIVDDDMIPGKKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITIDKIVQVDFLSSSWFLSAELVKTLFVEAPMTFMTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETT 406
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: UPI000900D020 (uncharacterized protein LOC109173525 n=4 Tax=Ipomoea TaxID=4119 RepID=UPI000900D020) HSP 1 Score: 221 bits (562), Expect = 3.250e-62 Identity = 120/261 (45.98%), Postives = 161/261 (61.69%), Query Frame = 1
Query: 76 SLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAAT 849
+L+ELM + S +W G P PK+TVILN FKR+ L QLDSL +QT H VWV F +P + R+V+ + + S Y+FK+YGRFQMAL D V++VDDDMIPG K L L H AGTE +S+LGSIGR+LP +D S SYRK+ S G+Y+PD +D V VD+L S WFL E ++ +++E P TF TGED H+S+ ++KY N G++V+P DPND ET G L+++S T
Sbjct: 165 TLSELMAMKS---KWDLRG-----PNRPKITVILNHFKRKTLCAQLDSLLNQTLPFH--HVWVLSFGSPNEQTLRRIVESYNDTRISFISSGYDFKYYGRFQMALQTEADLVYIVDDDMIPGKKMLQILAHVAGTEKYQNSVLGSIGRILPFRQKDFSFPSYRKFRSKEAGLYLPDPAYDILVDRIVQVDFLSSSWFLSAELIKTLFTETPFTFMTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETT 415
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Match: A0A426ZYP2_ENSVE (Uncharacterized protein n=5 Tax=Musaceae TaxID=4637 RepID=A0A426ZYP2_ENSVE) HSP 1 Score: 221 bits (562), Expect = 3.500e-62 Identity = 120/275 (43.64%), Postives = 167/275 (60.73%), Query Frame = 1
Query: 34 DAYVAWHRRQGLAPSLNELMNLPSTNERWARDGKNGVLPGAPKVTVILNLFKREVLTEQLDSLFSQTTASHISEVWVCVFSAPAQDYALRVVKDSKYKNVRLVVSDYNFKFYGRFQMALTAPTDFVWLVDDDMIPGNKYLAQLMHAAGTELLGSSLLGSIGRVLPRPGRDMSLVSYRKWGS-HGGMYMPDYYWD--QHHAVPVDYLCSQWFLRPEWLQFMWSERPMTFETGEDFHISHTMRKYANIGTYVMPYDPNDNETKGSKYRGLSFISAAT 849
D +A+ +L ELM + S +W+ G P PK+TVILN FKR+ L QLDSL +QT H VWV F +P++ R+V+ + + S Y+FK+YGRFQMAL DFV+++DDDMIPG K L L H AGT+ +S+LGSIGR+LP +D + SYRK+ S G+Y+PD +D V VD+L S WFL + ++ ++ E P+TF TGED H+S+ ++KY N G+YV+P DPND ET G L+++S T
Sbjct: 136 DEVLAFQEESSGTETLAELMRMES---KWSPRG-----PSIPKITVILNHFKRKTLCAQLDSLLNQTLPFH--HVWVLSFGSPSELSLRRIVEGYNNSRISFISSSYDFKYYGRFQMALQTEADFVYILDDDMIPGKKMLEILSHVAGTDKYRNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSADLVKTLFVETPVTFMTGEDLHLSYQLQKYRNAGSYVLPVDPNDKETWGDSEHRLAYVSETT 400 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77629.15446.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig77629.15446.1 >prot_H-elongata_contig77629.15446.1 ID=prot_H-elongata_contig77629.15446.1|Name=mRNA_H-elongata_contig77629.15446.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=286bp QEGLLRQKNQLDAYVAWHRRQGLAPSLNELMNLPSTNERWARDGKNGVLPback to top mRNA from alignment at H-elongata_contig77629:38..2812+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig77629.15446.1 ID=mRNA_H-elongata_contig77629.15446.1|Name=mRNA_H-elongata_contig77629.15446.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2775bp|location=Sequence derived from alignment at H-elongata_contig77629:38..2812+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig77629:38..2812+ >mRNA_H-elongata_contig77629.15446.1 ID=mRNA_H-elongata_contig77629.15446.1|Name=mRNA_H-elongata_contig77629.15446.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1716bp|location=Sequence derived from alignment at H-elongata_contig77629:38..2812+ (Himanthalia elongata Himel1 dioecious)back to top |