mRNA_H-elongata_contig7761.15443.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig7761.15443.1
Unique NamemRNA_H-elongata_contig7761.15443.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig7761.15443.1 vs. uniprot
Match: A0A6H5KS37_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KS37_9PHAE)

HSP 1 Score: 496 bits (1277), Expect = 1.950e-169
Identity = 254/348 (72.99%), Postives = 293/348 (84.20%), Query Frame = 1
Query:   43 LGETFSLLSRSTQQPWERWKARHGGVFAQEEANRKEQAVAKATGVRPEYKLTFWGCMVAGAVSRSVAQTALHPANVVKTLLQAKGSVRAILPLTWTTLARGAGAQFLLSLPNGALHFAVLENTKARMVDIFPVRSASFLLDFASSSTATALCSVMSTPQMLLTNRIMAGVYPNLLSGVRSVIKEEGIRGFYVGWWPGLVQKVPSYGLTWVLFQQVKDLHYKMSKRLPTNSENFWLGSAAAAGSVTIMIPMDTVKTRLVTQST-SPQAYTGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYFVYEFIKKNMAEVPEGT-PRAPGEDVPVRVKH-VDKLDSITD 1077
            LG   +    ST++P  RWKARHG +FA E  NRK QA A+A G+RP+YKLTFWGCMVAGA       T+LHPANV+KTLLQ KGS RAILPLTWTTL+RGAGAQFLLSLPNGALHFAVLENTK+RM ++FP++SASFLLDFAS S ATALCSVMSTPQM+LTNRIMAGVYPNL +GVRS+I+E+G  GFY GWWPGLVQK+PSYGLTWVLFQQVKDLHY+M+KRLP+N+ENFWLG  AAAGSVTIMIPMDTVKTRLVTQS+ S   Y+GI NCF+RMLREEGL SFYNSL+PRLVSVVPMIGVQY VYEF+K+ MAEVPE   P    ++V  R    V++L+++T+
Sbjct:  118 LGGLLASWGESTKEPIARWKARHGSLFAHENVNRKAQAAARAAGMRPDYKLTFWGCMVAGA-------TSLHPANVIKTLLQTKGSFRAILPLTWTTLSRGAGAQFLLSLPNGALHFAVLENTKSRMAEMFPLKSASFLLDFASCSVATALCSVMSTPQMVLTNRIMAGVYPNLWTGVRSIIQEKGALGFYAGWWPGLVQKIPSYGLTWVLFQQVKDLHYRMAKRLPSNAENFWLGCIAAAGSVTIMIPMDTVKTRLVTQSSASTVMYSGIFNCFTRMLREEGLTSFYNSLSPRLVSVVPMIGVQYLVYEFMKRLMAEVPEAAAPMPKKKNVLSRTTVLVEELETVTE 458          
BLAST of mRNA_H-elongata_contig7761.15443.1 vs. uniprot
Match: A0A835ZCC4_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC4_9STRA)

HSP 1 Score: 358 bits (919), Expect = 4.320e-116
Identity = 189/309 (61.17%), Postives = 223/309 (72.17%), Query Frame = 1
Query:  109 HGG-VFAQEEANRKEQAVAKATGVRPEYKLTFWGCMVAGAVSRSVAQTALHPANVVKTLLQAKGSVRAILPLTWTTLARGAGAQFLLSLPNGALHFAVLENTKARMVDIFPVRSASFLLDFASSSTATALCS--VMSTPQMLLTNRIMAGVYPNLLSGVRSVIKEEGIRGFYVGWWPGLVQKVPSYGLTWVLFQQVKDLHYKMSKRLPTNSENFWLGSAAAAGSVTIMIPMDTVKTRLVTQST-SPQAYTGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYFVYEFIKKNMAE--VPEGTPRA 1017
            HG  +FA+ EAN      A+ TG RP YKLTFWGCMVAGA+SRSVAQ ALHP NV+KTLLQ KGS  A+LPLT   L RGAGAQFLLS+P GA H+AVLE TK  M D+FP                       V+STP M+LT+RIMAG YPNLLSG+ S+ KE G+RGFY GW PGLVQK+PSYGLTWV FQQ KDLH++  K  P++ ENFWLG+ AAAGSVT+MIPMDTVKTRLVTQ+  S + Y GI++CF  + R EG+G+FYNSLTPRL SVVPMIG+QY +   + + MAE  + EG  RA
Sbjct:   72 HGSELFAEREANELAIEKARLTGTRPAYKLTFWGCMVAGALSRSVAQVALHPFNVLKTLLQTKGSFAAVLPLTVADLTRGAGAQFLLSVPTGAFHYAVLEATKHAMTDVFPAXXXXXXXXXXXXXXXXXXXXXXVLSTPTMVLTSRIMAGSYPNLLSGIGSICKESGLRGFYAGWLPGLVQKIPSYGLTWVFFQQAKDLHFRFFKHEPSDGENFWLGAIAAAGSVTVMIPMDTVKTRLVTQTAGSARHYRGIIDCFRTIARTEGVGAFYNSLTPRLASVVPMIGIQYGILCLLTRKMAEGSIGEGARRA 380          
BLAST of mRNA_H-elongata_contig7761.15443.1 vs. uniprot
Match: W7THW6_9STRA (S-adenosylmethionine mitochondrial carrier protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THW6_9STRA)

HSP 1 Score: 319 bits (818), Expect = 3.080e-99
Identity = 166/277 (59.93%), Postives = 208/277 (75.09%), Query Frame = 1
Query:  193 LTFWGCMVAGAVSRSVAQTALHPANVVKTLLQAKGSVRAILPLTWTTLARGAGAQFLLSLPNGALHFAVLENTKARMVDIFPVRSASFLLDFASSSTATALCSVMSTPQMLLTNRIMAGVYPNLLSGVRSVIKEEGIRGFYVGWWPGLVQKVPSYGLTWVLFQQVKDLHYKMSKRLPTNSENFWLGSAAAAGSVTIMIPMDTVKTRLVTQSTSPQA---YTGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYFVYEFIKKNMAEVPEGTPR 1014
            LTFWG M+AGAVSRS AQTA+HPANVVKTLLQ KG+   +  L    L RGAGAQF LSLP+GAL FAVLE TK+ +   FPV  A    DF SS+ +T +CSV+STPQM+LT+RIMAG YPNL+ GVR+V+K +G++G Y GW+  L QK+PSYGLTWV FQQ+K    +      TN ENF +G+ AAA +V +MIP+DTVKTR+VTQ+ +P A   Y G+ +CFSR+L+EEGL +FY  L PRLVSVVPMIG+Q+ VYEF+K+ +A +PE  PR
Sbjct:  220 LTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGAGE-LANLNVQILTRGAGAQFALSLPHGALAFAVLEATKSTLSSWFPVNFAGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPEKGPR 495          
BLAST of mRNA_H-elongata_contig7761.15443.1 vs. uniprot
Match: D7FP70_ECTSI (Mitochondrial energy transfer protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP70_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 4.980e-94
Identity = 156/264 (59.09%), Postives = 195/264 (73.86%), Query Frame = 1
Query:  211 MVAGAVSRSVAQTALHPANVVKTLLQAKGSVRAILPLTWTTLARGAGAQFLLSLPNGALHFAVLENTKARMVDIFPVR---SASFLLDFASSSTATALCSVMSTPQMLLTNRIMAGVYPNLLSGVRSVIKEEGIRGFYVGWWPGLVQKVPSYGLTWVLFQQVKDLHYKMSKRLPTNSENFWLGSAAAAGSVTIMIPMDTVKTRLVTQSTSPQA--YTGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYFVYEFIKKNM 987
            M AGAVSRS+AQT + PANVVKTLLQ +G+   +  L++  L RGAGAQF++SLP+GA ++A LE        IFP      A  +LDF SSS AT +CSV+STPQM+LT+RIMAG+YPNL SGVR + + +G+ GFYVGW   + QK+PSYGLTWV FQQ K LH K + R PTN+ENF LG+AAA  +V IMIPMDTVKTRLVTQ+       Y G+L   +R++REEGLG  Y SLTPRLVSVVPMIG+Q+ +YEF++K +
Sbjct:    1 MFAGAVSRSIAQTCMQPANVVKTLLQGRGTASQLSNLSFKLLTRGAGAQFVMSLPHGAFNYATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMVLTDRIMAGIYPNLASGVREITRTQGLPGFYVGWSANVAQKIPSYGLTWVFFQQFKRLHRKATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQAGVVPYKGVLQTLTRIVREEGLGPIYRSLTPRLVSVVPMIGIQFGIYEFVRKEL 264          
BLAST of mRNA_H-elongata_contig7761.15443.1 vs. uniprot
Match: A0A835Z5P9_9STRA (Mitochondrial energy transfer protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P9_9STRA)

HSP 1 Score: 289 bits (740), Expect = 7.450e-91
Identity = 146/267 (54.68%), Postives = 195/267 (73.03%), Query Frame = 1
Query:  211 MVAGAVSRSVAQTALHPANVVKTLLQAKGSVRAILPLTWTTLARGAGAQFLLSLPNGALHFAVLENTKARMVDIFPVRSASF-LLDFASSSTATALCSVMSTPQMLLTNRIMAGVYPNLLSGVRSVIKEEGIRGFYVGWWPGLVQKVPSYGLTWVLFQQVKDLHYKMSKRLPTNSENFWLGSAAAAGSVTIMIPMDTVKTRLVTQSTSPQA--YTGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYFVYEFIKKNMAEVPE 1002
            M AGA+SR++AQTA+ PANVVKTLLQ + +   +  L++  L RGAGAQFLLSLP+GA +FA LE  K       P   A   +LDF SS+ AT +CS++STPQM++T+RIMA +YPNL S VR++ + EG++GFY GW P L QK+PSYGLTWV FQQ K  H ++ +R PTN ENF LG+AAA  +V I+IP+DT KTR+VTQ  +P    YTG++ C  R++REEG+G+ Y +L PRL SVVPMIG+Q+ VYE++K+ + +  E
Sbjct:    1 MFAGALSRAIAQTAMQPANVVKTLLQGRSTSGQLKHLSFKLLTRGAGAQFLLSLPHGAFNFATLEAVKEYTSSFLPAAGAMGPVLDFFSSTVATTICSIISTPQMVITDRIMADIYPNLASAVRTISQTEGLKGFYAGWGPNLAQKIPSYGLTWVFFQQFKLAHQRVVRREPTNGENFALGAAAAGATVCILIPLDTAKTRIVTQVATPGLVPYTGVVECIQRVIREEGIGTLYKALGPRLASVVPMIGIQFGVYEYLKRELLKFNE 267          
BLAST of mRNA_H-elongata_contig7761.15443.1 vs. uniprot
Match: A0A6H5JLA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA3_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 1.270e-90
Identity = 157/270 (58.15%), Postives = 198/270 (73.33%), Query Frame = 1
Query:  193 LTFWGCMVAGAVSRSVAQTALHPANVVKTLLQAKGSVRAILPLTWTTLARGAGAQFLLSLPNGALHFAVLENTKARMVDIFPVR---SASFLLDFASSSTATALCSVMSTPQMLLTNRIMAGVYPNLLSGVRSVIKEEGIRGFYVGWWPGLVQKVPSYGLTWVLFQQVKDLHYKMSKRLPTNSENFWLGSAAAAGSVTIMIPMDTVKTRLVTQSTSPQA--YTGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYFVYEFIKKNM 987
            LTF   M AGA+SRS+AQT + PANVVKTLLQ +G+   +  L++  L RGAGAQF++S+P+GA ++A LE        IFP      A  +LDF SSS AT +CSV+STPQM+LT+RIMAG+YPNL SGVR + + +G+ GFYVGW   + QK+PSYGLTWV FQQ K LH K + R PTN+ENF LG+AAA  +V IMIPMDTVKTRLVTQ+       Y G+L   +R++REEGLG  Y SLTPRLVSVVPMIG+Q+ +YEF++K +
Sbjct:  356 LTFTEAMFAGAISRSIAQTCMQPANVVKTLLQGRGTASQLSNLSFKLLTRGAGAQFVMSVPHGAFNYATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMVLTDRIMAGIYPNLASGVREITRTQGLPGFYVGWSANVAQKIPSYGLTWVFFQQFKRLHRKATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTAQAGVVPYKGVLQTLTRIVREEGLGPIYRSLTPRLVSVVPMIGIQFGIYEFVRKEI 625          
BLAST of mRNA_H-elongata_contig7761.15443.1 vs. uniprot
Match: A0A0G4H4F1_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H4F1_VITBC)

HSP 1 Score: 291 bits (746), Expect = 6.760e-90
Identity = 148/277 (53.43%), Postives = 206/277 (74.37%), Query Frame = 1
Query:  190 KLTFWGCMVAGAVSRSVAQTALHPANVVKTLLQAKGSVRAI-----LPLTWTTLARGAGAQFLLSLPNGALHFAVLENTKARMVDIFPVRSASFLLDFASSSTATALCSVMSTPQMLLTNRIMAGVYPNLLSGVRSVIKEEGIRGFYVGWWPGLVQKVPSYGLTWVLFQQVKDLHYKMSKRLPTNSENFWLGSAAAAGSVTIMIPMDTVKTRLVTQST--SPQAYTGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYFVYEFIKKNMAEVP 999
            KLTFWG M+AGA+SRSVAQTA+HP   VKTLLQ + + +        P  W    RGAGAQFL+SLP+GA++FAVL   K +M  + P++ A F+ DF S ++AT LCSV+STPQM+L +RI+ G+YPNL+SG+  +++ EG+RG Y GW+PG++QK+PSY LTWV +QQ+++LH  +  R P+++ENF +G+ AA   V IMIP+DTVKTRLVTQ+T  + Q Y GI++CF R+++EEG+G  Y +L  RL+SVVPMIG+Q+ VYE++K  +   P
Sbjct:  113 KLTFWGNMLAGALSRSVAQTAVHPLIGVKTLLQGRNTWQGWGYFLGHPGIWW---RGAGAQFLISLPHGAMNFAVLGFMKHQMTRLMPIKQAGFVFDFCSQASATFLCSVISTPQMVLVDRIVTGIYPNLVSGLSKLLRTEGVRGLYTGWFPGMIQKIPSYSLTWVAYQQLRNLHSVIFPRDPSDAENFLIGATAAGIVVAIMIPVDTVKTRLVTQATLGAVQPYKGIIDCFLRVIKEEGVGRLYRALPMRLMSVVPMIGIQFGVYEYVKSRLLSDP 386          
BLAST of mRNA_H-elongata_contig7761.15443.1 vs. uniprot
Match: A0A4D9D1K6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1K6_9STRA)

HSP 1 Score: 287 bits (734), Expect = 7.420e-90
Identity = 149/257 (57.98%), Postives = 189/257 (73.54%), Query Frame = 1
Query:  253 LHPANVVKTLLQAKGSVRAILPLTWTTLARGAGAQFLLSLPNGALHFAVLENTKARMVDIFPVRSASFLLDFASSSTATALCSVMSTPQMLLTNRIMAGVYPNLLSGVRSVIKEEGIRGFYVGWWPGLVQKVPSYGLTWVLFQQVKDLHYKMSKRLPTNSENFWLGSAAAAGSVTIMIPMDTVKTRLVTQSTSPQA---YTGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYFVYEFIKKNMAEVPEGTPR 1014
            +HPANVVKTLLQ KG+   +  L    L RGAGAQF LSLP+GAL FAVLE TK+ +   FPV  A    DF SS+ +T +CSV+STPQM+LT+RIMAG YPNL  GVR+V+K +G++G Y GW+  L QK+PSYGLTWV FQQ+K    +      TN ENF +G+ AAA +V +MIP+DTVKTR+VTQ+ +P A   Y G+ +CFSR+L+EEGL +FY  L PRLVSVVPMIG+Q+ VYEF+K+ +A +PE  PR
Sbjct:    1 MHPANVVKTLLQTKGAGE-LANLNVQILTRGAGAQFALSLPHGALAFAVLEATKSTLSSWFPVNFAGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLAHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPEKGPR 256          
BLAST of mRNA_H-elongata_contig7761.15443.1 vs. uniprot
Match: A0A7S2PBP1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PBP1_9STRA)

HSP 1 Score: 276 bits (707), Expect = 3.020e-84
Identity = 151/290 (52.07%), Postives = 198/290 (68.28%), Query Frame = 1
Query:  175 VRPEYKLTFWGCMVAGAVSRSVAQTALHPANVVKTLLQAKGS--------VRAILPLTWTTLAR---------GAGAQFLLSLPNGALHFAVLENTKARMVDIFPVRSASFLLDFASSSTATALCSVMSTPQMLLTNRIMAGVYPNLLSGVRSVIKEEGIRGFYVGWWPGLVQKVPSYGLTWVLFQQVKDLHYKMSKRLPTNSENFWLGSAAAAGSVTIMIPMDTVKTRLVTQSTSPQA--YTGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYFVYEFIKKNM 987
            +R    L FW  MV GAVSRS+AQT +HPAN +KT+LQ++GS        V     LT+T LAR         GAGAQF++S+P+GA++FAVLE  + +M  IF   +  F LDF SS  AT  CSV+STPQM++T+ IMAG YPNL + V  + K++G+ GFY GW+PGLV K+PSYGLTWV FQQ+K +  ++ KR P + EN  +G  A+A +V IMIP+DT+KTRLVTQ   P    Y GI +   R+ +EEG G+FY  L PRLVSVVPMIG+Q+ +YE++KK M
Sbjct:   92 IRTTRPLLFWENMVCGAVSRSMAQTIMHPANTMKTILQSRGSQSQASLFGVAEGEALTFTKLARLRNLKVLTRGAGAQFIMSVPHGAVNFAVLEYVRKQMGRIFQNSNMGFGLDFLSSCVATFCCSVVSTPQMMITDNIMAGTYPNLSAAVTGLAKDKGVMGFYTGWFPGLVGKIPSYGLTWVFFQQLKRMQLQIMKREPFDIENSIMGCMASATTVCIMIPVDTIKTRLVTQLNYPDMIPYNGIFDAAVRITKEEGFGAFYRGLAPRLVSVVPMIGIQFGLYEYMKKVM 381          
BLAST of mRNA_H-elongata_contig7761.15443.1 vs. uniprot
Match: B8BRG0_THAPS (Mitochondrial energy transfer protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRG0_THAPS)

HSP 1 Score: 271 bits (692), Expect = 5.690e-84
Identity = 141/267 (52.81%), Postives = 189/267 (70.79%), Query Frame = 1
Query:  199 FWGCMVAGAVSRSVAQTALHPANVVKTLLQAKGSVRAILPLTWTTLARGAGAQFLLSLPNGALHFAVLENTKARMVDIFPV-RSASFL-------LDFASSSTATALCSVMSTPQMLLTNRIMAGVYPNLLSGVRSVIKEEGIRGFYVGWWPGLVQKVPSYGLTWVLFQQVKDLHYKMSKRLPTNSENFWLGSAAAAGSVTIMIPMDTVKTRLVTQSTSPQ--AYTGILNCFSRMLREEGLGSFYNSLTPRLVSVVPMIGVQYFVYE 969
            FW  M+ GA+SRS AQT +HPAN +KT+LQ+  SV    PL+   L RGAGAQ +LS+P+GA++FAVLE  + +M ++    R A  +       +DF SS+ +T  CSV+STPQM++ + IMAG YPNL++    ++K+ G+ GFY GWWPG+  K+PSYGLTW LF+Q+K +  +M KR   + EN  +G  A+A +V IMIPMDTVKTRLVTQ   P   AY GI +CF R+L+EEG+G+FY  LTPRL+SVVPMIG+Q+ VYE
Sbjct:    1 FWEAMICGAISRSAAQTIMHPANTMKTILQSSRSVPGKTPLS--NLTRGAGAQLILSIPHGAVNFAVLEFVRRQMNNVVSQSRYADAINRNFGPGMDFLSSALSTICCSVVSTPQMMICDNIMAGTYPNLVAATNGLMKDRGVAGFYTGWWPGIAGKIPSYGLTWTLFEQIKRVRTRMFKRPAKDIENSIMGCIASATTVCIMIPMDTVKTRLVTQMNYPDLVAYKGINDCFRRVLQEEGIGAFYRGLTPRLLSVVPMIGIQFGVYE 265          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7761.15443.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KS37_9PHAE1.950e-16972.99Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZCC4_9STRA4.320e-11661.17Mitochondrial carrier domain-containing protein n=... [more]
W7THW6_9STRA3.080e-9959.93S-adenosylmethionine mitochondrial carrier protein... [more]
D7FP70_ECTSI4.980e-9459.09Mitochondrial energy transfer protein n=1 Tax=Ecto... [more]
A0A835Z5P9_9STRA7.450e-9154.68Mitochondrial energy transfer protein n=1 Tax=Trib... [more]
A0A6H5JLA3_9PHAE1.270e-9058.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4H4F1_VITBC6.760e-9053.43Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A4D9D1K6_9STRA7.420e-9057.98Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2PBP1_9STRA3.020e-8452.07Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B8BRG0_THAPS5.690e-8452.81Mitochondrial energy transfer protein (Fragment) n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7761contigH-elongata_contig7761:32..4569 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score527.7
Seed ortholog evalue4.2e-147
Seed eggNOG ortholog2880.D8LBD1
KEGG koko:K14684
KEGG TC2.A.29.23
EggNOG free text desc.S-adenosyl-L-methionine transmembrane transport
EggNOG OGsKOG0768@1,KOG0768@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPutative mitochondrial carrier protein PET8
Ec32 orthologEc-27_004380.1
Exons6
Model size1606
Cds size1083
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931182.3539705-CDS-H-elongata_contig7761:31..2671622931182.3539705-CDS-H-elongata_contig7761:31..267Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7761 32..267 +
1691679731.774507-CDS-H-elongata_contig7761:31..2671691679731.774507-CDS-H-elongata_contig7761:31..267Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7761 32..267 +
1622931182.372449-CDS-H-elongata_contig7761:1193..13621622931182.372449-CDS-H-elongata_contig7761:1193..1362Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7761 1194..1362 +
1691679731.7920144-CDS-H-elongata_contig7761:1193..13621691679731.7920144-CDS-H-elongata_contig7761:1193..1362Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7761 1194..1362 +
1622931182.3872828-CDS-H-elongata_contig7761:2391..25051622931182.3872828-CDS-H-elongata_contig7761:2391..2505Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7761 2392..2505 +
1691679731.804348-CDS-H-elongata_contig7761:2391..25051691679731.804348-CDS-H-elongata_contig7761:2391..2505Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7761 2392..2505 +
1622931182.3985064-CDS-H-elongata_contig7761:2949..31791622931182.3985064-CDS-H-elongata_contig7761:2949..3179Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7761 2950..3179 +
1691679731.8130007-CDS-H-elongata_contig7761:2949..31791691679731.8130007-CDS-H-elongata_contig7761:2949..3179Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7761 2950..3179 +
1622931182.4095354-CDS-H-elongata_contig7761:3348..35681622931182.4095354-CDS-H-elongata_contig7761:3348..3568Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7761 3349..3568 +
1691679731.8215833-CDS-H-elongata_contig7761:3348..35681691679731.8215833-CDS-H-elongata_contig7761:3348..3568Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7761 3349..3568 +
1622931182.4267764-CDS-H-elongata_contig7761:3932..40461622931182.4267764-CDS-H-elongata_contig7761:3932..4046Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7761 3933..4046 +
1691679731.8300838-CDS-H-elongata_contig7761:3932..40461691679731.8300838-CDS-H-elongata_contig7761:3932..4046Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7761 3933..4046 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931182.4457035-UTR-H-elongata_contig7761:4046..45691622931182.4457035-UTR-H-elongata_contig7761:4046..4569Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7761 4047..4569 +
1691679731.8392823-UTR-H-elongata_contig7761:4046..45691691679731.8392823-UTR-H-elongata_contig7761:4046..4569Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig7761 4047..4569 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7761.15443.1prot_H-elongata_contig7761.15443.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig7761 32..4046 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig7761.15443.1

>prot_H-elongata_contig7761.15443.1 ID=prot_H-elongata_contig7761.15443.1|Name=mRNA_H-elongata_contig7761.15443.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=361bp
GVKGRGGGGGGGAVLGETFSLLSRSTQQPWERWKARHGGVFAQEEANRKE
QAVAKATGVRPEYKLTFWGCMVAGAVSRSVAQTALHPANVVKTLLQAKGS
VRAILPLTWTTLARGAGAQFLLSLPNGALHFAVLENTKARMVDIFPVRSA
SFLLDFASSSTATALCSVMSTPQMLLTNRIMAGVYPNLLSGVRSVIKEEG
IRGFYVGWWPGLVQKVPSYGLTWVLFQQVKDLHYKMSKRLPTNSENFWLG
SAAAAGSVTIMIPMDTVKTRLVTQSTSPQAYTGILNCFSRMLREEGLGSF
YNSLTPRLVSVVPMIGVQYFVYEFIKKNMAEVPEGTPRAPGEDVPVRVKH
VDKLDSITDA*
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mRNA from alignment at H-elongata_contig7761:32..4569+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig7761.15443.1 ID=mRNA_H-elongata_contig7761.15443.1|Name=mRNA_H-elongata_contig7761.15443.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4538bp|location=Sequence derived from alignment at H-elongata_contig7761:32..4569+ (Himanthalia elongata Himel1 dioecious)
GGGGTCAAGGGGAGGGGGGGGGGGGGGGGGGGGGGGGCCGTTCTGGGAGA AACCTTCTCTTTGCTGAGTCGATCGACACAACAGCCGTGGGAGAGATGGA AGGCGAGACACGGGGGGGTATTTGCTCAAGAGGAAGCCAACCGCAAGGAG CAGGCCGTAGCGAAAGCTACTGGGGTGCGTCCAGAGTACAAGTTAACGTT CTGGGGATGCATGGTGGCGGGGGCCGTCAGCAGGAGGTGAGGGGAGGAGA TTGCTTTCGTGATATTGATGGCGTGATACTGATTGCCACAAACACACTAA AAGTCAATAATACGAGTAGTAATGTTCGCAAATGCTACGATTAGTATAGT TATGCCGAGTAAACGTTTTACGATTATTATACTGATGGGCTTCTTGTACT TTTTTACCTGTGTACTTGTACCTATATCGTGCTGTTGAAGCGACACTATT AAGCTGTCCAACATGAGAGAGAAAGGGCACGTGCTTTCCCTTTAAAGGGT GACACCTATGATAGATGCATGAAGCATCCATTCTGCTTTCCCTTTCGACG ACACGATACGAAACGGCATCACACCTTGGCTAACGCTTGTCCAATTTTCG GGGGCGCGTCTCGAGAGGAACGCTTATGCTAATCCTACTGCTGTTGTATG TTGTTGAGAGTTTTGTGAAACCTCCGCCGGCCCGATTGGTGTGGGATGTC AAGAGTAAGTGGAAGTTTAAAGCAGTTACGTCAAGTGATTGCTGTAGTGC TTACTTGCTGTAATACTCTCAATAGCGGCAGCTCGATGACGGCGATTTCG GATACTCCTCTCTTTCGGAACTAAACAATAACCCGACAGTAACCCGACAT TCTCCGTTGTGGCCGTGTCGTTCCCTATCGAGATTGAGTTTGGTTCAAAG TCGATGTAATTTCTCGCGAACTTGTTAAGGGGCAAATATCGCGACACAGA AGATAGCGTGATAGCGATAGTTTATCGTGGATGCTTTGTCTTCCCTCGGA TGATGCTGCCTTTACATGAACTAGTTCACGGCTTTTGGATGACTAATCAA CCAACCGGTAGAGCTGTCTTTTCTACCGACCCTTTGCCTATCGTGGTGGG TCGGGTCGGGTCGTGGTTTGTCATGCCATTGTTGTGGTTTCCTCTTGATG CATCACCTACAGCGTGGCCCAAACTGCGCTCCATCCGGCGAACGTTGTCA AGACTCTGCTGCAGGCAAAGGGGTCTGTGAGAGCGATACTCCCGCTAACG TGGACTACTCTTGCCAGGGGGGCCGGAGCACAGTTTTTGCTGTCGCTACC AAACGGTGCTTTACATTTCGCCGTGTTGGAGGTGACTGACTGAGTGACTG GAGTAGATAGACTGGAGAAGTTCCTGAGGCTAGGGGGATGCGAGCTACGT ATTTCATAACGAACAAGCATAAATATTGCTATTCATATTGTCCCTGCTCA TTCCTGCTTTCTGATAGTTGGTTCCCTGGATTGCACCTATTGTGCATGAA GGTGTGGATGTTCGGAGAGTGAGAATGAGCCTAAAGTCTTTTAAATAAAA ATAATATTGCCCCTGGGAAGGATTTAAAGTACGATAATTATTAAATTAGT GGCTTGAAAGAGTCCTTCTTCTTGCTTAGGCCGCTTTATCTGACCTAGGT TCGGTGGAATAGCTGACTGACTCTCGCCGTTCACGTTTACTATACTATAT TATATTATACTATATTATATTATATTTTGCTATGCTACACAGCTAACTCG TGTTTTGTTTATCTAGGCTACGCCACGGCTAGGTCATGGCGTTACAGTAA CAGTACATTTCGCTCTATGTATTTATTGTACTTATTGCATGTATTGTATT TATTGTATTTATTGCATGTATTGTATTTATTGTACTTATTGCATGTGTTG TATTTATTGCATGTATTGTATTTATTGCATGTATTGTATTTATTGCATGT ATTGTATTTATTGCATGTATTGTATGTATTGTATTTATTGTACTTATTGC ATGTATTTATTGAATTGAATGTATTGTATTTATTGTACTTATTGCATGTA TTGTATTTATTGTACTTATTGCATGTATTTATTTAATTGAATGTATTGTA TTTATTGTACTTATTGCATGTATTGTATTTATTGTACTTATTGCATGTAT TGTATGTATTGTATTTATTGCATGTATTGAATTGAATTGAATGTAATGTA TTTATTGTACTTATTGCATGTATTGTATTTATTGTACTTATTGCATGTAT TGTATTTATTGTACTTATTGCATGTATTGTATTTATTGTACTTATTGCAT GTATTGTATGTATTGTATTTATTGTATTTATTGCATGTATTGTATTTATT GTACTGTCAGAACACGAAGGCAAGAATGGTGGATATTTTTCCGGTGCGGT CGGCATCGTTTCTTCTGGACTTCGCTTCCTCTTCCACCGCGACGGCGCTA TGCTCCGTCATGAGCACACCGCAGGTCGGAAGAAGGCGTTGGACGCTTGA CAGTCAGTGTACGGCGTAGGCGCTTTAAGGATATTATGTATATAGTATAT AGTATACGTCCCGGTGTATATACTGTATTGTGTACTGGTATATCATTTTT TTCTAAATTGATTGATCGCGTCGCATTGCCGAGAGGGTGGATGTTGTTGG CACTCGCGTTTATTAATCGAGAGTCTTGAGCAGAAGCGCACCCCTTTAAT GCGTTAACGCCCTTCGTGTAATATAGTAATAGTAGTACCAATTAATTATT AAATGCGGTTGTTTATATTTATCAGTACGCTTCGGCTGCCTTTGCCACCG TCGAGCTCGACCCTGCAAAAGGGGCTATAGTGTCAAAACCCTTCAAAACC AAACTAAAGCCAGGATGATCCGGGAATCTTCGCCTGCCTGGGTCAATTCG GAACGCTTGGTGCCGCAGATGCTGCTGACCAACCGAATCATGGCCGGAGT ATACCCCAACCTCCTGAGTGGAGTCCGGAGCGTGATCAAGGAAGAGGGTA TACGAGGATTCTACGTGGGGTGGTGGCCGGGGCTGGTTCAGAAGGTCCCC TCGTACGGGTTGACGTGGGTGTTGTTTCAGCAGGTGAAGGATCTCCACTA CAAGATGTCGAAGCGCCTCCCAACAAATTCGGAAAACTTCTGGCTCGGGT GAGACTTGTATTTTACAGCAATCATCCCCATCCCCTATCCCTATCAGACG TTGCATGATTGGTTCGACGACGACGACACGCCGATTCTATGGCTAGAGTC CCTTATGATGCTCTTTATACTGCATCCTTAACACGGGGTGCGCGCGTCTC GCTTGGTCGACCCAAAGGTCCGCCGCGGCGGCAGGATCAGTCACGATCAT GATCCCAATGGACACCGTCAAGACGAGGCTCGTGACCCAGTCGACTTCGC CGCAGGCGTACACGGGAATTTTGAACTGCTTTTCGAGGATGCTACGGGAA GAAGGCCTAGGCAGTTTCTACAACTCCCTCACGCCGAGGCTTGTGTCCGT CGTGCCCATGATTGGCGTGCAGTACTTCGTGTACGAGGTGAGTTTCCAAA ACGTCGACAGCCGGAGCGCCGTATGGCGTAAGAGCAGAGAAGAGAAGCGT AGTGCAGCACTATGTTAATAATGCTATTACTATTATAACCATTTACCGTA GCGCGTTCTCGTTCTCGTGGTTGGGAAGAGAATGAAAATATTCTTTACCG CAGCTCAGCTCTTCACCCGTCTTCTCAAACGCGATACGGCATCCGCCTTC ACCTCTACGTCAGGCCTCTCTTTTAGCAACGTTTCATTACTGTCACGCTC GAGACTTTCTTACGGAGCATGACACTAAGCGCGCCGCTTTGCCTCGACCG CTGTCTCCGCCACCGATTACCCTCCACACACACCCCTCTCTCCCCTTGCA GTTTATCAAGAAGAATATGGCTGAGGTGCCGGAAGGCACGCCGCGCGCCC CGGGGGAAGATGTGCCTGTTCGAGTAAAACACGTGGACAAGCTGGATTCG ATCACGGATGCTTAAAAGAAATGCGAAATTCTTGGCTTTCGTTTCGTTCC TCGTGTTTTGGGATGGCCGTTCCCGTCTCGAGAGCTCTCATCGCGATTGG CAAGCGCGGCATCGCACGAAGCCTTATCCTTGTTGATTGGGATGTGTCGA GACAAGAACGACTCGACTCCACCCGACTCGAGGGAGCGTGTGCGGCGTGC AATTTTGGGGAGTCACAGAGAAAAAAACTGTGACAGTCAATTTAAACTAG CAAGCTTCTTTTTCATGCCTTATTTGTAAGATACACACCTTGAAAGGGTT TTTTTAATAGAATGCCGTGTAGTTTTTAGTAGAGTAACGTGAAATGTAAT GCCCGACTCCGTAACACCGCGCTCCGGTGATTCGGCGGTAAACACCAACA GTAACTTTTAATATCCTTTTTTGTACCTGTACTAGTCAAGGATAGTCGCA AAGTTCTGCCAGTAACAGGTTGGCGATATTGGCGATATTTAAGAAGTGCT GGACTTTGCATTTTGACGCAAAGTAAATAAATATATCA
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Coding sequence (CDS) from alignment at H-elongata_contig7761:32..4569+

>mRNA_H-elongata_contig7761.15443.1 ID=mRNA_H-elongata_contig7761.15443.1|Name=mRNA_H-elongata_contig7761.15443.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2166bp|location=Sequence derived from alignment at H-elongata_contig7761:32..4569+ (Himanthalia elongata Himel1 dioecious)
GGGGTCAAGGGGAGGGGGGGGGGGGGGGGGGGGGGGGCCGTTCTGGGAGA
AACCTTCTCTTTGCTGAGTCGATCGACACAACAGCCGTGGGAGAGATGGA
AGGCGAGACACGGGGGGGTATTTGCTCAAGAGGAAGCCAACCGCAAGGAG
CAGGCCGTAGCGAAAGCTACTGGGGTGCGTCCAGAGTACAAGTTAACGTT
CTGGGGATGCATGGTGGCGGGGGCCGTCAGCAGGAGGGGGTCAAGGGGAG
GGGGGGGGGGGGGGGGGGGGGGGCCGTTCTGGGAGAAACCTTCTCTTTGC
TGAGTCGATCGACACAACAGCCGTGGGAGAGATGGAAGGCGAGACACGGG
GGGGTATTTGCTCAAGAGGAAGCCAACCGCAAGGAGCAGGCCGTAGCGAA
AGCTACTGGGGTGCGTCCAGAGTACAAGTTAACGTTCTGGGGATGCATGG
TGGCGGGGGCCGTCAGCAGGAGCGTGGCCCAAACTGCGCTCCATCCGGCG
AACGTTGTCAAGACTCTGCTGCAGGCAAAGGGGTCTGTGAGAGCGATACT
CCCGCTAACGTGGACTACTCTTGCCAGGGGGGCCGGAGCACAGTTTTTGC
TGTCGCTACCAAACGGTGCTTTACATTTCGCCGTGTTGGAGCGTGGCCCA
AACTGCGCTCCATCCGGCGAACGTTGTCAAGACTCTGCTGCAGGCAAAGG
GGTCTGTGAGAGCGATACTCCCGCTAACGTGGACTACTCTTGCCAGGGGG
GCCGGAGCACAGTTTTTGCTGTCGCTACCAAACGGTGCTTTACATTTCGC
CGTGTTGGAGAACACGAAGGCAAGAATGGTGGATATTTTTCCGGTGCGGT
CGGCATCGTTTCTTCTGGACTTCGCTTCCTCTTCCACCGCGACGGCGCTA
TGCTCCGTCATGAGCACACCGCAGAACACGAAGGCAAGAATGGTGGATAT
TTTTCCGGTGCGGTCGGCATCGTTTCTTCTGGACTTCGCTTCCTCTTCCA
CCGCGACGGCGCTATGCTCCGTCATGAGCACACCGCAGATGCTGCTGACC
AACCGAATCATGGCCGGAGTATACCCCAACCTCCTGAGTGGAGTCCGGAG
CGTGATCAAGGAAGAGGGTATACGAGGATTCTACGTGGGGTGGTGGCCGG
GGCTGGTTCAGAAGGTCCCCTCGTACGGGTTGACGTGGGTGTTGTTTCAG
CAGGTGAAGGATCTCCACTACAAGATGTCGAAGCGCCTCCCAACAAATTC
GGAAAACTTCTGGCTCGGATGCTGCTGACCAACCGAATCATGGCCGGAGT
ATACCCCAACCTCCTGAGTGGAGTCCGGAGCGTGATCAAGGAAGAGGGTA
TACGAGGATTCTACGTGGGGTGGTGGCCGGGGCTGGTTCAGAAGGTCCCC
TCGTACGGGTTGACGTGGGTGTTGTTTCAGCAGGTGAAGGATCTCCACTA
CAAGATGTCGAAGCGCCTCCCAACAAATTCGGAAAACTTCTGGCTCGGGT
CCGCCGCGGCGGCAGGATCAGTCACGATCATGATCCCAATGGACACCGTC
AAGACGAGGCTCGTGACCCAGTCGACTTCGCCGCAGGCGTACACGGGAAT
TTTGAACTGCTTTTCGAGGATGCTACGGGAAGAAGGCCTAGGCAGTTTCT
ACAACTCCCTCACGCCGAGGCTTGTGTCCGTCGTGCCCATGATTGGCGTG
CAGTACTTCGTGTACGAGGTCCGCCGCGGCGGCAGGATCAGTCACGATCA
TGATCCCAATGGACACCGTCAAGACGAGGCTCGTGACCCAGTCGACTTCG
CCGCAGGCGTACACGGGAATTTTGAACTGCTTTTCGAGGATGCTACGGGA
AGAAGGCCTAGGCAGTTTCTACAACTCCCTCACGCCGAGGCTTGTGTCCG
TCGTGCCCATGATTGGCGTGCAGTACTTCGTGTACGAGTTTATCAAGAAG
AATATGGCTGAGGTGCCGGAAGGCACGCCGCGCGCCCCGGGGGAAGATGT
GCCTGTTCGAGTAAAACACGTGGACAAGCTGGATTCGATCACGGATGCTT
AATTTATCAAGAAGAATATGGCTGAGGTGCCGGAAGGCACGCCGCGCGCC
CCGGGGGAAGATGTGCCTGTTCGAGTAAAACACGTGGACAAGCTGGATTC
GATCACGGATGCTTAA
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