prot_H-elongata_contig7761.15444.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7761.15444.1
Unique Nameprot_H-elongata_contig7761.15444.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length687
Homology
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BLAST of mRNA_H-elongata_contig7761.15444.1 vs. uniprot
Match: D8LBD0_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBD0_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.040e-8
Identity = 28/32 (87.50%), Postives = 28/32 (87.50%), Query Frame = 0 
Query:  655 PTGWQAVKDKSSGDTYYWNKVTGVTTWDFPTK 686
            P GWQAV DKSSGDTYYWNK TG TTWDFPTK
Sbjct:  276 PPGWQAVPDKSSGDTYYWNKATGQTTWDFPTK 307
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BLAST of mRNA_H-elongata_contig7761.15444.1 vs. uniprot
Match: A0A6H5KKE1_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKE1_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 4.310e-8
Identity = 28/32 (87.50%), Postives = 28/32 (87.50%), Query Frame = 0 
Query:  655 PTGWQAVKDKSSGDTYYWNKVTGVTTWDFPTK 686
            P GWQAV DKSSGDTYYWNK TG TTWDFPTK
Sbjct:  860 PPGWQAVPDKSSGDTYYWNKATGQTTWDFPTK 891
[Close]
BLAST of mRNA_H-elongata_contig7761.15444.1 vs. uniprot
Match: A0A7S3ZAP2_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZAP2_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 7.500e-5
Identity = 22/33 (66.67%), Postives = 25/33 (75.76%), Query Frame = 0 
Query:  654 LPTGWQAVKDKSSGDTYYWNKVTGVTTWDFPTK 686
            LP GWQAV+D SSG+ YYW   TGVT WD+P K
Sbjct:   98 LPDGWQAVRDPSSGEVYYWEVKTGVTQWDYPEK 130
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7761.15444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LBD0_ECTSI1.040e-887.50WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KKE1_9PHAE4.310e-887.50WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A7S3ZAP2_9EUKA7.500e-566.67Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 653..686
e-value: 3.3E-9
score: 46.6
IPR001202WW domainPFAMPF00397WWcoord: 654..684
e-value: 5.8E-11
score: 42.3
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 658..684
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 652..686
score: 13.122
NoneNo IPR availableGENE3D2.20.70.10coord: 650..686
e-value: 3.5E-10
score: 41.5
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 647..685

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7761contigH-elongata_contig7761:5347..8944 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7761.15444.1mRNA_H-elongata_contig7761.15444.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7761 4565..9609 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7761.15444.1 ID=prot_H-elongata_contig7761.15444.1|Name=mRNA_H-elongata_contig7761.15444.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=687bp
MRGVDDRGGGMADDGKPPSGGRGRGMVLPAWMTSQQHTPQIGGPPPAGAP
VAQSTTQAPSSSLPNNPAAPAPGQTRGGMVLPVWMTSQQHTPQVGGPPPA
GAPVAQPSTQAPSSSLPRNSGAQAPGQTRGPASPPVHQSRFGPPPALPQF
PPRQAPPQAPSQGQAQDGRVNQQVVTGQQSLPASFAPPSAPTPAQPVFAT
APAPAHQRGPPAFLAPPPILPPQVSAGRPPQSNPFPPQQTQGFPPQQQPH
GQVNQQAQHIYARTQIPALGGSTALPQFQSQQQHEQNQHEQHQQSPPQQP
QHQPPPQQQPQHQPPPQQPQHQPPPQQPQHQPPPQQPQHQPPPQQQQTQQ
TLVRPQVGQQLMAAPGPFVPPFSPPAMAATPASVEKFAAPGGVVQMNTAT
LGMRVDAFGRLIPAPQPPRLQLPQPPQQQPQPNQQQQQPQQQPQQHQQQQ
HQQQQHQQQQQQPSQQQGQQQVQQQQPPPALSFPPHNGFSQQQQFTPQKP
PQLDIYGRPIPQAQQPQPQQQPPQPQPQQQQPPQSQPQPQQPQSQPQQQQ
QTQPPQQLDPYIRPIISMPQPAPVTQQQQPQAAVAYANFVPPVHTQTSTP
ASSPTPASVSAPASAPTPAAAPTPAAAPTPAAAPTPAASPTPAPAQAPPA
TPALPTGWQAVKDKSSGDTYYWNKVTGVTTWDFPTK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf