prot_H-elongata_contig77595.15441.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig77595.15441.1
Unique Nameprot_H-elongata_contig77595.15441.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length84
Homology
BLAST of mRNA_H-elongata_contig77595.15441.1 vs. uniprot
Match: D7G0C8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0C8_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 6.360e-24
Identity = 55/83 (66.27%), Postives = 63/83 (75.90%), Query Frame = 0
Query:    1 MYQAMFQEFSELYHRQEIVGALLTHAGAGSVAETDSALVVLSALAVSSSDARGGLRPFAAFIRGLLDYTNGFTHNQVRRFPRL 83
            MY+ +F  FSE YHRQE+VGAL+TH GAGS  ETDSAL  LSALA S SD   GLRPFAAFIR L+DY  G+TH QVR+  R+
Sbjct:  377 MYREIFSGFSEAYHRQEVVGALITHCGAGSELETDSALSALSALA-SPSDGGSGLRPFAAFIRALMDYMQGYTHYQVRKVFRI 458          
BLAST of mRNA_H-elongata_contig77595.15441.1 vs. uniprot
Match: A0A7M7MYJ9_STRPU (Uncharacterized protein n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7MYJ9_STRPU)

HSP 1 Score: 68.9 bits (167), Expect = 9.530e-12
Identity = 39/79 (49.37%), Postives = 54/79 (68.35%), Query Frame = 0
Query:    1 MYQAMFQEFSELYHRQEIVGALLTHAGAGSVAETDSALVVLSALAVSSSDARGGLRPFAAFIRGLLDYTNGFTHNQVRR 79
            +YQ  F  F ++Y +QE+VGAL+TH G+G  AE DSAL +LS+LA S +     L PFA FI+G+LDY +  T  QV++
Sbjct:  460 VYQTAFAAF-DVYSKQEVVGALVTHIGSGLSAEMDSALDILSSLASSHTK---DLAPFAVFIKGVLDYLDNLTMTQVKK 534          
BLAST of mRNA_H-elongata_contig77595.15441.1 vs. uniprot
Match: A0A4V1J5W5_9FUNG (Fanconi anaemia protein FANCD2 (Fragment) n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4V1J5W5_9FUNG)

HSP 1 Score: 68.2 bits (165), Expect = 1.410e-11
Identity = 38/78 (48.72%), Postives = 51/78 (65.38%), Query Frame = 0
Query:    1 MYQAMFQEFSELYHRQEIVGALLTHAGAGSVAETDSALVVLSALAVSSSDARGGLRPFAAFIRGLLDYTNGFTHNQVR 78
            MYQA F  F + Y RQE+VGAL+TH G+G   E D++L  L A+ + S  A   +RP+A FIRG+LDY +    +QVR
Sbjct:  266 MYQACFTIF-DAYFRQEVVGALVTHIGSGDSCEIDTSLAALQAITLRSPAA---MRPYAIFIRGILDYIDNLNFDQVR 339          
BLAST of mRNA_H-elongata_contig77595.15441.1 vs. uniprot
Match: A0A833QU46_9POAL (Fanconi anemia group D2 protein n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QU46_9POAL)

HSP 1 Score: 64.3 bits (155), Expect = 4.030e-10
Identity = 34/84 (40.48%), Postives = 52/84 (61.90%), Query Frame = 0
Query:    1 MYQAMFQEFSELYHRQEIVGALLTHAGAGSVAETDSALVVLSALAVSSSDARGGLRPFAAFIRGLLDYTNGFTHNQVRRFPRLF 84
            ++ A+F+EF ++Y RQEI+G L+TH G+G   E  SAL VL  L  + SD    L P ++ I G++DY  GF  + +R+   +F
Sbjct:  430 LFMALFEEFCDIYSRQEILGILVTHIGSGVSHEVSSALDVLVLLTSNHSDE---LIPLSSHINGIMDYLEGFNEDNLRKVYEIF 510          
BLAST of mRNA_H-elongata_contig77595.15441.1 vs. uniprot
Match: A0A2K2DS13_BRADI (Uncharacterized protein n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A2K2DS13_BRADI)

HSP 1 Score: 63.9 bits (154), Expect = 5.510e-10
Identity = 33/84 (39.29%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    1 MYQAMFQEFSELYHRQEIVGALLTHAGAGSVAETDSALVVLSALAVSSSDARGGLRPFAAFIRGLLDYTNGFTHNQVRRFPRLF 84
            ++ A+F+EFS+ + RQE+VG+L+TH G+G   E  SAL ++ +L  ++SD    L P A+ I G+LDY   F  + +R+   +F
Sbjct:  405 LFTALFEEFSDTFSRQELVGSLITHIGSGVSYEVSSALDIMISLTTNNSDE---LIPVASHITGILDYLESFHEDNLRKVYEIF 485          
BLAST of mRNA_H-elongata_contig77595.15441.1 vs. uniprot
Match: A0A835UL84_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835UL84_VANPL)

HSP 1 Score: 63.5 bits (153), Expect = 7.380e-10
Identity = 32/84 (38.10%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    1 MYQAMFQEFSELYHRQEIVGALLTHAGAGSVAETDSALVVLSALAVSSSDARGGLRPFAAFIRGLLDYTNGFTHNQVRRFPRLF 84
            +Y+++F+E  ++Y RQE++GALLTH G+G   E +SAL  L+ LAV  S+    L PFA+++ G++D+   F    + +   +F
Sbjct:  459 LYKSLFEELKDIYSRQEVLGALLTHIGSGHDQEVNSALETLNLLAVRLSE---DLIPFASYLTGVMDHMENFDDANLHKIYEVF 539          
BLAST of mRNA_H-elongata_contig77595.15441.1 vs. uniprot
Match: A0A6P8ICE2_ACTTE (Fanconi anemia group D2 protein-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8ICE2_ACTTE)

HSP 1 Score: 62.4 bits (150), Expect = 1.920e-9
Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    1 MYQAMFQEFSELYHRQEIVGALLTHAGAGSVAETDSALVVLSALAVSSSDARGGLRPFAAFIRGLLDYTNGFTHNQVRR 79
            +Y+  F  F +LY +QEIVGAL+TH G+G   E DS+L VLS L  +       + PFA FI+G+LDY +  T +Q+R+
Sbjct:  442 IYRLAFASF-DLYCKQEIVGALVTHIGSGFATEADSSLDVLSDLVETHPKI---MAPFAVFIKGILDYLDNLTLSQIRK 516          
BLAST of mRNA_H-elongata_contig77595.15441.1 vs. uniprot
Match: A0A446KZ22_TRITD (Uncharacterized protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446KZ22_TRITD)

HSP 1 Score: 62.0 bits (149), Expect = 2.550e-9
Identity = 32/84 (38.10%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    1 MYQAMFQEFSELYHRQEIVGALLTHAGAGSVAETDSALVVLSALAVSSSDARGGLRPFAAFIRGLLDYTNGFTHNQVRRFPRLF 84
            ++ A+F+EFS+ + RQE+VG+L+TH G+G   E  SAL ++ +L  ++S+    L P A+ I G+LDY   F  + +R+   +F
Sbjct:  438 LFTALFEEFSDTFSRQELVGSLITHIGSGISYEVSSALDIMISLTSNNSEE---LIPIASHITGILDYLESFHEDNLRKVYEIF 518          
BLAST of mRNA_H-elongata_contig77595.15441.1 vs. uniprot
Match: A0A453BMG4_AEGTS (Uncharacterized protein n=3 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453BMG4_AEGTS)

HSP 1 Score: 62.0 bits (149), Expect = 2.550e-9
Identity = 32/84 (38.10%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    1 MYQAMFQEFSELYHRQEIVGALLTHAGAGSVAETDSALVVLSALAVSSSDARGGLRPFAAFIRGLLDYTNGFTHNQVRRFPRLF 84
            ++ A+F+EFS+ + RQE+VG+L+TH G+G   E  SAL ++ +L  ++S+    L P A+ I G+LDY   F  + +R+   +F
Sbjct:  367 LFTALFEEFSDTFSRQELVGSLITHIGSGVSYEVSSALDIMISLTSNNSEE---LIPIASHITGILDYLESFHEDNLRKVYEIF 447          
BLAST of mRNA_H-elongata_contig77595.15441.1 vs. uniprot
Match: A0A446M8C0_TRITD (Uncharacterized protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446M8C0_TRITD)

HSP 1 Score: 62.0 bits (149), Expect = 2.580e-9
Identity = 32/84 (38.10%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    1 MYQAMFQEFSELYHRQEIVGALLTHAGAGSVAETDSALVVLSALAVSSSDARGGLRPFAAFIRGLLDYTNGFTHNQVRRFPRLF 84
            ++ A+F+EFS+ + RQE+VG+L+TH G+G   E  SAL ++ +L  ++S+    L P A+ I G+LDY   F  + +R+   +F
Sbjct:  168 LFTALFEEFSDTFSRQELVGSLITHIGSGVSYEVSSALDIMISLTSNNSEE---LIPIASHITGILDYLESFHEDNLRKVYEIF 248          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77595.15441.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0C8_ECTSI6.360e-2466.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7M7MYJ9_STRPU9.530e-1249.37Uncharacterized protein n=2 Tax=Echinacea TaxID=76... [more]
A0A4V1J5W5_9FUNG1.410e-1148.72Fanconi anaemia protein FANCD2 (Fragment) n=1 Tax=... [more]
A0A833QU46_9POAL4.030e-1040.48Fanconi anemia group D2 protein n=1 Tax=Carex litt... [more]
A0A2K2DS13_BRADI5.510e-1039.29Uncharacterized protein n=2 Tax=Brachypodium dista... [more]
A0A835UL84_VANPL7.380e-1038.10Uncharacterized protein n=1 Tax=Vanilla planifolia... [more]
A0A6P8ICE2_ACTTE1.920e-945.57Fanconi anemia group D2 protein-like n=1 Tax=Actin... [more]
A0A446KZ22_TRITD2.550e-938.10Uncharacterized protein n=2 Tax=Triticum turgidum ... [more]
A0A453BMG4_AEGTS2.550e-938.10Uncharacterized protein n=3 Tax=Aegilops tauschii ... [more]
A0A446M8C0_TRITD2.580e-938.10Uncharacterized protein n=2 Tax=Triticum turgidum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029448Fanconi anaemia protein FANCD2PFAMPF14631FancD2coord: 1..80
e-value: 4.1E-15
score: 54.4
IPR029448Fanconi anaemia protein FANCD2PANTHERPTHR32086FAMILY NOT NAMEDcoord: 1..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77595contigH-elongata_contig77595:168..1076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77595.15441.1mRNA_H-elongata_contig77595.15441.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig77595 150..1076 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig77595.15441.1 ID=prot_H-elongata_contig77595.15441.1|Name=mRNA_H-elongata_contig77595.15441.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp
MYQAMFQEFSELYHRQEIVGALLTHAGAGSVAETDSALVVLSALAVSSSD
ARGGLRPFAAFIRGLLDYTNGFTHNQVRRFPRLF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029448FANCD2