prot_H-elongata_contig120002.1544.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig120002.1544.1
Unique Nameprot_H-elongata_contig120002.1544.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length62
Homology
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BLAST of mRNA_H-elongata_contig120002.1544.1 vs. uniprot
Match: D7FLU8_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLU8_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 3.010e-10
Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 0 
Query:    1 ILYGRDRKEWLEQSAEAKGRYAFLARTNASLIFEAIMAMNRGENLAFVGGIGSVKMNVRTAC 62
            +++ R+R EWL+Q  E+KGR+A++ARTNA L+ EA+ A+ RG+  AF+ G       V+  C
Sbjct:  418 VVFERERHEWLQQDCESKGRFAYIARTNAGLMTEAVAAIGRGDRAAFMDGRAPNLQEVKDLC 479
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig120002.1544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLU8_ECTSI3.010e-1043.55DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig120002contigH-elongata_contig120002:766..1310 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig120002.1544.1mRNA_H-elongata_contig120002.1544.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig120002 766..1310 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig120002.1544.1 ID=prot_H-elongata_contig120002.1544.1|Name=mRNA_H-elongata_contig120002.1544.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=62bp
ILYGRDRKEWLEQSAEAKGRYAFLARTNASLIFEAIMAMNRGENLAFVGG
IGSVKMNVRTAC
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