mRNA_H-elongata_contig7751.15433.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig7751.15433.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 495 bits (1275), Expect = 6.570e-167 Identity = 249/410 (60.73%), Postives = 300/410 (73.17%), Query Frame = 3
Query: 6 EDGGCATITDLYESCVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDYNEVRGHGGSLYFEDTLVTSWDTPNKAPQDVYEDGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADESNPEVFDTTNVYGDITNSNIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLT------------IANNDVXXXXXXXXXXXXXXXXXXXXXXXXXNGGADAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHGNTFTNVKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTP-DASADGRPSDNSFYDNTISNTETGAKITEADDTAITGKI 1196
E GC TITDLY +ESDG + KGPI+ LDD+ + + +P ++ KWLLT++L + G++FYCRG+SIGGDCDELRIQSTG TD++EVR HGGS+YFE T+VTSWDTPNK PQ Y GRSF+NCVSE + E C GQ +N+ GECRMDII+SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++ S+IHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT I NN+V +GG AAGIFLHRSSD V+DNVV+DMQDAGMA++ES +ADI+ N F++VK+GIR+SLG N V++N+F++ S GLYTYQGSD P D +DGRPSDN F +N I N G KI E DDT IT +
Sbjct: 83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVY------------------------DGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNV 467
BLAST of mRNA_H-elongata_contig7751.15433.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 499 bits (1286), Expect = 1.040e-163 Identity = 242/391 (61.89%), Postives = 291/391 (74.42%), Query Frame = 3
Query: 6 EDGGCATITDLYE-SCVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDYNEVRGHGGSLYFEDTLVTSWDTPNKAPQDVYEDGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADESNPEVFDTTNVYGDITNSNIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNDVXXXXXXXXXXXXXXXXXXXXXXXXXNGGADAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHGNTFTNVKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTPDASADGRPSDNSFYDNTISNTETGAKITEADD 1175
E GC T+TDLY E+DG + KGP+Y+LDD+ + P+ +T WLL ++L++ G +FYC+GTS GGDC++LRIQSTGS D++EVRGHGGSLYFEDT+VTSWDTPNK PQ+ YE+GRSF+NCVSE + + CEG KN+ GECRMDII+SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+T S+IHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA N+V +GGA AAGIFLHRSSD V+DN + +MQDAG+A++ESFDA I+GN KYGIR+SLG GNN VY N F + S+YGLYTY+GSD PD S DGRPS N N + + G KI E DD
Sbjct: 445 EGEGCFTMTDLYNFRGTENDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDD 833
BLAST of mRNA_H-elongata_contig7751.15433.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 466 bits (1198), Expect = 3.840e-156 Identity = 233/404 (57.67%), Postives = 286/404 (70.79%), Query Frame = 3
Query: 6 EDGGCATITDLYE-SCVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDYNEVRGHGGSLYFEDTLVTSWDTPNKAPQDVYEDGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVR---------GFCADESNPEVFDTTNVYGDITNSNIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNDVXXXXXXXXXXXXXXXXXXXXXXXXXNGGADAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHGNTFTNVKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTPDASADGRPSDNSFYDNTISNTETGAKITEADDTAIT 1187
E GC T+TDLY E+DG + KGP+Y+LD + + +PTSVT KWLL ++L+V G+IFYC G+ GGDCDELRIQSTG D+ EVRGHGGS+YF T+VTSWDTPNK PQ+ YE GRSF+NCVSE + ETC+G KND GECRMDII+SEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+TTNVYGDI NS+IHHMYYG YSYGHQGGVWTNN+MHDNHQY +ANN V +GG DA GIFLHRSSD+ EVY N +++M DAG+A++ESF+ADIH N V++GIR+SLG G N VYDN F++CS +GLYTY GSD PD S +GRP+ N+F +N ++N+ G K +D+ +T
Sbjct: 18 ESEGCFTLTDLYNFRGTENDG-SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVS-NGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVT 407
BLAST of mRNA_H-elongata_contig7751.15433.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 454 bits (1169), Expect = 4.940e-152 Identity = 224/393 (57.00%), Postives = 274/393 (69.72%), Query Frame = 3
Query: 12 GGCATITDLYESCVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDYNEVRGHGGSLYFEDTLVTSWDTPNKAPQDVYEDGRSFINCVSEY-ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADESNPEVFDTTNVYGDITNSNIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNDVXXXXXXXXXXXXXXXXXXXXXXXXXNGGADAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHGNTFTNVKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTPDASADGRPSDNSFYDNTISNTETGAKITEADDTAIT 1187
GGC T++DLY + KGP+++LD ND + + T+ TGKWLLT+DLFV G+ YCRG +GG+C ELRI+ST +D+ E+RGHGG+LYFEDT+VTSWD + PQ+ Y+DGRSFI CVSE ++TC N+ GECRMDIIDSEMGYLG+ SE+YG+TWKVRGFC+D SNP+VFD NVYGD+ S+IHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA N V +GGADAAGIFLHRS D EVY N + +M DAG+A++E+ DIH N ++GIR+ LG NN V+DNVF G++TY GSD P GRP DN FY+NTI TETG KI E+D+ +IT
Sbjct: 9 GGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISIT 397
BLAST of mRNA_H-elongata_contig7751.15433.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 430 bits (1105), Expect = 9.650e-144 Identity = 210/350 (60.00%), Postives = 255/350 (72.86%), Query Frame = 3
Query: 27 ITDLYE-SCVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDYNEVRGHGGSLYFEDTLVTSWDTPNKAPQDVYEDGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWK--------VRGFCADESNPEVFDTTNVYGDITNSNIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLT--IANNDVXXXXXXXXXXXXXXXXXXXXXXXXXNGGADAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHGNTFTNVKYGIRISLGGGNNMVYDNVFDECSK 1043
+TDLY E DG + KGP+Y+LDD+ + P+ +T WLL ++L++ G +FYC+GTS GGDC++LRIQSTGS D++EVRGHGGSLYFEDT+VTSWDTPNK PQ+ YE GRSF+NCVSE + + CEG KN+ GECRMDII+SE+ YLG+FDSESYG+TWK VRGFC D SNPEVFD TNVYGD+ S+IHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT IA+ +GGA A GIFLHRSSD V+DN + +MQDAG+A++E+FDA I+GNT KYGIR+SLG GNN+VY N F + S+
Sbjct: 1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASK--------------RCNNVKIFENEVRDGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335
BLAST of mRNA_H-elongata_contig7751.15433.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 409 bits (1052), Expect = 2.440e-129 Identity = 215/399 (53.88%), Postives = 263/399 (65.91%), Query Frame = 3
Query: 3 LEDGGCATITDLYESCVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDYNEVRGHGGSLYFEDTLVTSWDTPNKAPQDVYEDGRSFINCVSEYESD--ETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADESNPEVFDTTNVYGDITNSNIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNDVXXXXXXXXXXXXXXXXXXXXXXXXXNGGADAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHGNTFTNVKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTPDASAD--GRPSDNSFYDNTISNTETGAKITEADDTAIT 1187
+ GGCAT+TD+Y + G GP+++LD ND+++ S TG WLL D+ V GS+ G GGD LRIQSTGS DY E+RGHGGSL F DT VTSWDT K Y+ RSFI CVSE +D +TC+G N GECRMDII SEMG +G+ +ESYG++WKVRG+C+++ NPEVF+ T V GDI +S+I+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA N V +GG A GIFLHRSSD CEV+ N VYDM+DAGMAIMES A IH NTFTNVKYGIR+S+G N+V +N F EC +YG+YTYQG+D P+AS D G DN+F+ NT+ E G KI +A+ T
Sbjct: 402 IRGGGCATLTDIYTA---QGGHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFT 792
BLAST of mRNA_H-elongata_contig7751.15433.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 395 bits (1015), Expect = 2.340e-126 Identity = 207/386 (53.63%), Postives = 263/386 (68.13%), Query Frame = 3
Query: 3 LEDGGCATITDLYESCVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDYNEVRGHGGSLYFEDTLVTSWDTPNKAPQDVYEDGRSFINCVSEYESDET--CEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADES------NPEVFDTTNVYGDITNSNIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNDVXXXXXXXXXXXXXXXXXXXXXXXXXNGGADAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHGNTFTNVKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTPDA-SADGRPSDNSFYDNTI 1133
E GGC T+T +YE+ E DG P+Y+LD+N+D++ + TG WLL +L V+ GS GT+ GD D LR+ ST S D+ EVRG+GG+L+F+ T VTSWDT N ++ DGRSFINCV++++ C+G+ ++GECRMDII S MG +GWFD+ESYGLTWKVRG C + N E+F+ NVYGDI NS I+ MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTI+NN V +GG DA GIFLHRSSD EV+DNVVY+MQDAGMA+MES+DA+I+ N+FTN +YGIR+SLG G N++ +N+F ++YGLYTY GSD PD +++GRPSDN F NTI
Sbjct: 193 FEGGGCGTLTQMYEA-QEGDG-----PLYVLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTI 569
BLAST of mRNA_H-elongata_contig7751.15433.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 380 bits (976), Expect = 3.930e-124 Identity = 203/318 (63.84%), Postives = 233/318 (73.27%), Query Frame = 3
Query: 90 ILDDNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDYNEVRGHGGSLYFEDTLVTSWDTPNKAPQDVYEDGRSFINCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADESNPEVFDTTNVYGDITNSNIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNDVXXXXXXXXXXXXXXXXXXXXXXXXXNGGADAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDA-DI-----HGNTFTNVKYGIRISLGGGNNMVYDNV 1025
+LDD+ + + SPTSVT KWLL S+L+V G+IFYC G+ GGDCDELRIQSTG D+ EVRGHGGS+YF T+VTSWDTPNK PQ+ YE GRSF+NCVSE + ETC+G+ KND GECRMDII+SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDI NSNIHHMYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIA XXXXXXXXX +GG +A GIFLHRSSD+ EVY G DA D+ +GNTF N K I + GG DN+
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVY---------GGXXXXXXXDAPDVSNGRPNGNTFNNNK--ITNTAGGVKIKNSDNI 307
BLAST of mRNA_H-elongata_contig7751.15433.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 363 bits (933), Expect = 1.150e-115 Identity = 196/392 (50.00%), Postives = 246/392 (62.76%), Query Frame = 3
Query: 12 GGCATITDLYESCVESDGWTPKGPIYILD-DNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDYNEVRGHGGSLYFEDTLVTSWDTPNKAPQDVYEDGRSFINCVSEY--ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADESNPEVFDTTNVYGDITNSNIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNDVXXXXXXXXXXXXXXXXXXXXXXXXXNGGADAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHGNTFTNVKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTPDASADGRPSDNSFYDNTISNTETGAKITEADDT 1178
GGCAT+ ++ES K P+Y +D D+ D+ + T G WLLT +L+V G GT GGD DELR+ ST T Y +R HGGSL F T V SWDT +P + DGRS+I+ VSE + DETCEG KN GE RMDI +SE+GYLG+ DSESYGLTWKVRGFC D+SNPE+FD NVYG++ +S+IHH+ +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI +N+V G +AGIFLHRSSD V N V+D DAG+A++ESF+AD+ NTF N KYG+R+S+G +N+ +N+ SKY YTY GSD PD + GR +N F N+ S E KI EAD T
Sbjct: 71 GGCATLGQIWESRAG------KAPLYAVDPDSGDVSETET---GTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGT 452
BLAST of mRNA_H-elongata_contig7751.15433.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 361 bits (927), Expect = 7.990e-115 Identity = 193/392 (49.23%), Postives = 245/392 (62.50%), Query Frame = 3
Query: 12 GGCATITDLYESCVESDGWTPKGPIYILD-DNDDIMYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDYNEVRGHGGSLYFEDTLVTSWDTPNKAPQDVYEDGRSFINCVSEY--ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADESNPEVFDTTNVYGDITNSNIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNDVXXXXXXXXXXXXXXXXXXXXXXXXXNGGADAAGIFLHRSSDSCEVYDNVVYDMQDAGMAIMESFDADIHGNTFTNVKYGIRISLGGGNNMVYDNVFDECSKYGLYTYQGSDTPDASADGRPSDNSFYDNTISNTETGAKITEADDT 1178
GGC T+ ++ES KGP+Y +D D+ ++ TS TG WLLT +L+V G G+ GGD DELR+ ST T N +R HGGSL F T V SWDT +P + DGRS+I+ +SE + DETCEG KN GE RMDI SE+GYLG++DSESYGLTWKVRGFC D+SNPEVFD NVYG++ +S+IHHM +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI +N+V G +AGIFLHRSSD V N V+D DAG+A++ESF+AD+ NTF N KYG+R S+G +N+ +N ++Y Y+Y G+D PD + GR +N F N+ S E KI EAD T
Sbjct: 67 GGCVTLGQIWESRAG------KGPLYAVDPDSGNVS---TSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFIN-LRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGT 448 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7751.15433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig7751.15433.1 >prot_H-elongata_contig7751.15433.1 ID=prot_H-elongata_contig7751.15433.1|Name=mRNA_H-elongata_contig7751.15433.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=416bp MYSPTSVTGKWLLTSDLFVLRGSIFYCRGTSIGGDCDELRIQSTGSTDYNback to top mRNA from alignment at H-elongata_contig7751:208..3024+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig7751.15433.1 ID=mRNA_H-elongata_contig7751.15433.1|Name=mRNA_H-elongata_contig7751.15433.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2817bp|location=Sequence derived from alignment at H-elongata_contig7751:208..3024+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig7751:208..3024+ >mRNA_H-elongata_contig7751.15433.1 ID=mRNA_H-elongata_contig7751.15433.1|Name=mRNA_H-elongata_contig7751.15433.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2496bp|location=Sequence derived from alignment at H-elongata_contig7751:208..3024+ (Himanthalia elongata Himel1 dioecious)back to top |