prot_H-elongata_contig77485.15430.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig77485.15430.1
Unique Nameprot_H-elongata_contig77485.15430.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length96
Homology
BLAST of mRNA_H-elongata_contig77485.15430.1 vs. uniprot
Match: D7FMA2_ECTSI (Ribonucleoside-diphosphate reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMA2_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 3.110e-22
Identity = 48/57 (84.21%), Postives = 51/57 (89.47%), Query Frame = 0
Query:   40 VFPAKDGE-GETPSMHVVKRDGRREPVMFDKITARIRRLCWGLDERYIDPVLIAQKV 95
             F  ++GE G  PSMHVVKRDGRREPVMFDKITARIRRLCWGLDERYIDPVL+AQKV
Sbjct:  159 AFLLEEGERGGAPSMHVVKRDGRREPVMFDKITARIRRLCWGLDERYIDPVLVAQKV 215          
BLAST of mRNA_H-elongata_contig77485.15430.1 vs. uniprot
Match: R1BN65_EMIHU (ATP-cone domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BN65_EMIHU)

HSP 1 Score: 79.7 bits (195), Expect = 3.910e-16
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0
Query:   46 GEGETPSMHVVKRDGRREPVMFDKITARIRRLCWGLDERYIDPVLIAQKVR 96
            G+  T SMHV+KRDGRREPVMFDKITARI++LC+G D +YIDP +I  K R
Sbjct:   98 GKSHTTSMHVIKRDGRREPVMFDKITARIKKLCYGFDPKYIDPTVITIKAR 148          
BLAST of mRNA_H-elongata_contig77485.15430.1 vs. uniprot
Match: R1BTQ7_EMIHU (ATP-cone domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BTQ7_EMIHU)

HSP 1 Score: 74.7 bits (182), Expect = 1.800e-15
Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 0
Query:   53 MHVVKRDGRREPVMFDKITARIRRLCWGLDERYIDPVLIAQKVR 96
            MHV+KRDGRREPVMFDKITARI++LC+G D +YIDP +I  K R
Sbjct:    1 MHVIKRDGRREPVMFDKITARIKKLCYGFDPKYIDPTVITIKAR 44          
BLAST of mRNA_H-elongata_contig77485.15430.1 vs. uniprot
Match: A0A6U8K7B8_EMIHU (Ribonucleoside-diphosphate reductase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6U8K7B8_EMIHU)

HSP 1 Score: 77.4 bits (189), Expect = 1.570e-14
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 0
Query:   50 TPSMHVVKRDGRREPVMFDKITARIRRLCWGLDERYIDPVLIAQKV 95
            T SMHV+KRDGRREPVMFDKITARI++LC+G D +YIDP +I  KV
Sbjct:   11 TTSMHVIKRDGRREPVMFDKITARIKKLCYGFDPKYIDPTVITIKV 56          
BLAST of mRNA_H-elongata_contig77485.15430.1 vs. uniprot
Match: A0A835YSZ4_9STRA (Ribonucleoside-diphosphate reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSZ4_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.390e-13
Identity = 34/43 (79.07%), Postives = 37/43 (86.05%), Query Frame = 0
Query:   53 MHVVKRDGRREPVMFDKITARIRRLCWGLDERYIDPVLIAQKV 95
            MHVVKRDGR EP  FDKI  R+RRLC GLDER+IDPVL+AQKV
Sbjct:    1 MHVVKRDGRTEPASFDKIVTRVRRLCNGLDERHIDPVLVAQKV 43          
BLAST of mRNA_H-elongata_contig77485.15430.1 vs. uniprot
Match: A0A448YKA0_BRENA (Ribonucleoside-diphosphate reductase n=1 Tax=Brettanomyces naardenensis TaxID=13370 RepID=A0A448YKA0_BRENA)

HSP 1 Score: 73.6 bits (179), Expect = 3.560e-13
Identity = 32/43 (74.42%), Postives = 39/43 (90.70%), Query Frame = 0
Query:   53 MHVVKRDGRREPVMFDKITARIRRLCWGLDERYIDPVLIAQKV 95
            M+V KRDGRREPV FDKITARI RLC+GLDE++IDP+ +AQ+V
Sbjct:    1 MYVFKRDGRREPVRFDKITARISRLCYGLDEKHIDPIAVAQRV 43          
BLAST of mRNA_H-elongata_contig77485.15430.1 vs. uniprot
Match: K8Z7A2_NANGC (Ribonucleoside-diphosphate reductase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z7A2_NANGC)

HSP 1 Score: 73.2 bits (178), Expect = 4.880e-13
Identity = 34/48 (70.83%), Postives = 38/48 (79.17%), Query Frame = 0
Query:   48 GETPSMHVVKRDGRREPVMFDKITARIRRLCWGLDERYIDPVLIAQKV 95
            GE P MHVVKRDGRREPV FDKIT R+R LC GL+  Y+DP  +AQKV
Sbjct:  125 GEAPYMHVVKRDGRREPVAFDKITKRLRSLCKGLNTDYVDPGRVAQKV 172          
BLAST of mRNA_H-elongata_contig77485.15430.1 vs. uniprot
Match: A0A6H5KL69_9PHAE (ATP-cone domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL69_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.550e-12
Identity = 30/43 (69.77%), Postives = 35/43 (81.40%), Query Frame = 0
Query:   53 MHVVKRDGRREPVMFDKITARIRRLCWGLDERYIDPVLIAQKV 95
            M V+KRDGR+E V FDKITARI  LC+GLD  Y++P LIAQKV
Sbjct:    1 MFVIKRDGRKETVSFDKITARISHLCYGLDPTYVEPTLIAQKV 43          
BLAST of mRNA_H-elongata_contig77485.15430.1 vs. uniprot
Match: A0A1M3CVX6_9CHLA (Ribonucleoside-diphosphate reductase n=1 Tax=Chlamydiales bacterium 38-26 TaxID=1895743 RepID=A0A1M3CVX6_9CHLA)

HSP 1 Score: 71.6 bits (174), Expect = 1.680e-12
Identity = 31/43 (72.09%), Postives = 40/43 (93.02%), Query Frame = 0
Query:   53 MHVVKRDGRREPVMFDKITARIRRLCWGLDERYIDPVLIAQKV 95
            M+VVKRDGR+EPV FDKITARI++LC+GLD +++DPVL+A KV
Sbjct:    1 MYVVKRDGRKEPVQFDKITARIQKLCYGLDLKHVDPVLVALKV 43          
BLAST of mRNA_H-elongata_contig77485.15430.1 vs. uniprot
Match: A0A875S038_EENNA (Ribonucleoside-diphosphate reductase n=1 Tax=Eeniella nana TaxID=13502 RepID=A0A875S038_EENNA)

HSP 1 Score: 71.6 bits (174), Expect = 1.690e-12
Identity = 30/43 (69.77%), Postives = 39/43 (90.70%), Query Frame = 0
Query:   53 MHVVKRDGRREPVMFDKITARIRRLCWGLDERYIDPVLIAQKV 95
            M+V KRDGRREPV FDKITARI RLC+GLD++++DP+ +AQ+V
Sbjct:    1 MYVFKRDGRREPVRFDKITARISRLCYGLDDKHVDPISVAQRV 43          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77485.15430.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMA2_ECTSI3.110e-2284.21Ribonucleoside-diphosphate reductase n=2 Tax=Ectoc... [more]
R1BN65_EMIHU3.910e-1668.63ATP-cone domain-containing protein n=1 Tax=Emilian... [more]
R1BTQ7_EMIHU1.800e-1572.73ATP-cone domain-containing protein n=1 Tax=Emilian... [more]
A0A6U8K7B8_EMIHU1.570e-1473.91Ribonucleoside-diphosphate reductase n=1 Tax=Emili... [more]
A0A835YSZ4_9STRA1.390e-1379.07Ribonucleoside-diphosphate reductase n=1 Tax=Tribo... [more]
A0A448YKA0_BRENA3.560e-1374.42Ribonucleoside-diphosphate reductase n=1 Tax=Brett... [more]
K8Z7A2_NANGC4.880e-1370.83Ribonucleoside-diphosphate reductase n=3 Tax=Monod... [more]
A0A6H5KL69_9PHAE1.550e-1269.77ATP-cone domain-containing protein n=1 Tax=Ectocar... [more]
A0A1M3CVX6_9CHLA1.680e-1272.09Ribonucleoside-diphosphate reductase n=1 Tax=Chlam... [more]
A0A875S038_EENNA1.690e-1269.77Ribonucleoside-diphosphate reductase n=1 Tax=Eenie... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005144ATP-cone domainPFAMPF03477ATP-conecoord: 53..92
e-value: 4.1E-8
score: 33.7
IPR005144ATP-cone domainPROSITEPS51161ATP_CONEcoord: 53..96
score: 12.38
IPR039718Ribonucleoside-diphosphate reductase large subunitPANTHERPTHR11573RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAINcoord: 53..95
NoneNo IPR availablePANTHERPTHR11573:SF24coord: 53..95
IPR008926Ribonucleotide reductase R1 subunit, N-terminalSUPERFAMILY48168R1 subunit of ribonucleotide reductase, N-terminal domaincoord: 58..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77485contigH-elongata_contig77485:2043..2818 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77485.15430.1mRNA_H-elongata_contig77485.15430.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig77485 2032..2818 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig77485.15430.1 ID=prot_H-elongata_contig77485.15430.1|Name=mRNA_H-elongata_contig77485.15430.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp
MVTGRPASTDERREGARARTLEGLEDVNSSQSSSEEDAFVFPAKDGEGET
PSMHVVKRDGRREPVMFDKITARIRRLCWGLDERYIDPVLIAQKVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005144ATP-cone_dom
IPR039718Rrm1
IPR008926RNR_R1-su_N