mRNA_H-elongata_contig77483.15429.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig77483.15429.1 vs. uniprot
Match: D7FJK6_ECTSI (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJK6_ECTSI) HSP 1 Score: 284 bits (727), Expect = 3.360e-89 Identity = 134/181 (74.03%), Postives = 150/181 (82.87%), Query Frame = 1
Query: 1 ICERIRENGEPGFAWLENMRTFGRMADPKNTRDVKAMGGNPCLEQTLESFEMCCLVETFPDKHESLEDFLETLRFAFMYAKTVTLGGTQWEQTNEILFRNRRIGCSMSGLAEFVTSRGLGTLHQWCEEGYRAISTIDQEISGEAKDWKIFSGAESPPPPSFQRRHIKPSGTVSLLAGATPG 543
+CERI++NGEPGFAWLENMRT+GRM D KN RD KAMGGNPCLEQTLESFEMCCLVETFPDKHESLEDFL TLRFA +YAKTVTLGGT W++TNEILFRNRRIGCSMSGLA+FV +RGLGTL +WCEEGY A+S ID+++S + P S + IKPSGTVSLLAGATPG
Sbjct: 361 VCERIQQNGEPGFAWLENMRTYGRMGDEKNDRDSKAMGGNPCLEQTLESFEMCCLVETFPDKHESLEDFLTTLRFAMLYAKTVTLGGTHWDKTNEILFRNRRIGCSMSGLAQFVAARGLGTLQEWCEEGYEAVSRIDEDLS-----------TQFGIPTSIKTTSIKPSGTVSLLAGATPG 530
BLAST of mRNA_H-elongata_contig77483.15429.1 vs. uniprot
Match: W7T512_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T512_9STRA) HSP 1 Score: 261 bits (667), Expect = 3.710e-79 Identity = 120/181 (66.30%), Postives = 141/181 (77.90%), Query Frame = 1
Query: 1 ICERIRENGEPGFAWLENMRTFGRMADPKNTRDVKAMGGNPCLEQTLESFEMCCLVETFPDKHESLEDFLETLRFAFMYAKTVTLGGTQWEQTNEILFRNRRIGCSMSGLAEFVTSRGLGTLHQWCEEGYRAISTIDQEISGEAKDWKIFSGAESPPPPSFQRRHIKPSGTVSLLAGATPG 543
+CER++ NGEPGFAWLENMR +GRM P + RD +AMGGNPCLEQTLESFE+CCLVETFPDKH+SLEDFL TL+FAF+YAKTVTLG T W +TN ++ RNRRIGCSMSGLA+FVT +G+G LH+WCEEGY+ + DQ S +W P S + IKPSGTVSLLAGATPG
Sbjct: 524 VCERVQRNGEPGFAWLENMRAYGRMGSPPDWRDARAMGGNPCLEQTLESFELCCLVETFPDKHDSLEDFLATLQFAFLYAKTVTLGPTHWAKTNAVMLRNRRIGCSMSGLAQFVTRKGMGELHRWCEEGYQTLQEADQRYS----EWLSI-------PRSVKTTSIKPSGTVSLLAGATPG 693
BLAST of mRNA_H-elongata_contig77483.15429.1 vs. uniprot
Match: A0A5A8DI17_CAFRO (Ribonucleoside-triphosphate reductase (thioredoxin) n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DI17_CAFRO) HSP 1 Score: 249 bits (635), Expect = 4.250e-75 Identity = 114/181 (62.98%), Postives = 136/181 (75.14%), Query Frame = 1
Query: 1 ICERIRENGEPGFAWLENMRTFGRMADPKNTRDVKAMGGNPCLEQTLESFEMCCLVETFPDKHESLEDFLETLRFAFMYAKTVTLGGTQWEQTNEILFRNRRIGCSMSGLAEFVTSRGLGTLHQWCEEGYRAISTIDQEISGEAKDWKIFSGAESPPPPSFQRRHIKPSGTVSLLAGATPG 543
+C+R+ NGEPGFAWL+NM+ +GRM DP N +D +AMGGNPCLEQTLES+E+CCLVETFPD HESLEDF TL+FA++YAKTVTLG T W TN +L RNRRIGCSMSG+A+FV RGL L QWC+ GY+AI D++ S DW P S + +KPSGTVSLLAGATPG
Sbjct: 397 VCDRVVRNGEPGFAWLDNMQQYGRMGDPANNKDSRAMGGNPCLEQTLESYELCCLVETFPDNHESLEDFKRTLKFAYLYAKTVTLGRTHWPLTNRVLLRNRRIGCSMSGIAQFVAKRGLEELRQWCDHGYQAIQDYDRKYS----DWLAI-------PRSIKTTSVKPSGTVSLLAGATPG 566
BLAST of mRNA_H-elongata_contig77483.15429.1 vs. uniprot
Match: A0A661VGD2_9CHLR (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A661VGD2_9CHLR) HSP 1 Score: 243 bits (621), Expect = 8.900e-74 Identity = 111/180 (61.67%), Postives = 138/180 (76.67%), Query Frame = 1
Query: 4 CERIRENGEPGFAWLENMRTFGRMADPKNTRDVKAMGGNPCLEQTLESFEMCCLVETFPDKHESLEDFLETLRFAFMYAKTVTLGGTQWEQTNEILFRNRRIGCSMSGLAEFVTSRGLGTLHQWCEEGYRAISTIDQEISGEAKDWKIFSGAESPPPPSFQRRHIKPSGTVSLLAGATPG 543
ER+R NGEPG+AWLENMR +GRMAD N +D +AMGGNPCLEQTLES+E+CCLVETFP+ H+SL+D+L TL++A++YAKTVTLG T W +TN ++ RNRRIGCSMSG+A+F+ +RG+G L QW +EGY I +D+E S DW P S + IKPSGTVSLLAGATPG
Sbjct: 327 AERVRYNGEPGYAWLENMREYGRMADAPNFKDHRAMGGNPCLEQTLESYELCCLVETFPNNHDSLDDYLTTLKYAYLYAKTVTLGKTHWPETNRVMLRNRRIGCSMSGIAQFIANRGIGKLRQWMDEGYEHIQDLDKEYS----DWMAI-------PRSIKTTSIKPSGTVSLLAGATPG 495
BLAST of mRNA_H-elongata_contig77483.15429.1 vs. uniprot
Match: A0A0G4J8Q7_PLABS (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J8Q7_PLABS) HSP 1 Score: 243 bits (621), Expect = 9.060e-74 Identity = 110/181 (60.77%), Postives = 135/181 (74.59%), Query Frame = 1
Query: 1 ICERIRENGEPGFAWLENMRTFGRMADPKNTRDVKAMGGNPCLEQTLESFEMCCLVETFPDKHESLEDFLETLRFAFMYAKTVTLGGTQWEQTNEILFRNRRIGCSMSGLAEFVTSRGLGTLHQWCEEGYRAISTIDQEISGEAKDWKIFSGAESPPPPSFQRRHIKPSGTVSLLAGATPG 543
+C R+ NGEPGFAWL+NMR +GRM+DP N RD +A GGNPCLEQTLESFE+CCLVETFP +H SL+DFL TL+ A +YAKTVTLG T+W ++N ++ RNRRIGCSMSG+A+F+T RGL LH WC+ GY A+ D+ +S +W P S + IKPSGTVSLLAGATPG
Sbjct: 348 VCSRVARNGEPGFAWLDNMRAYGRMSDPANDRDRRAEGGNPCLEQTLESFELCCLVETFPARHASLDDFLRTLKAALLYAKTVTLGATRWPESNRVMLRNRRIGCSMSGIAQFITQRGLHALHDWCQAGYAAVQLCDERVS----EWLAV-------PRSIKSTCIKPSGTVSLLAGATPG 517
BLAST of mRNA_H-elongata_contig77483.15429.1 vs. uniprot
Match: W2PW41_PHYPN (Ribonucleoside-triphosphate reductase (thioredoxin) n=10 Tax=Phytophthora TaxID=4783 RepID=W2PW41_PHYPN) HSP 1 Score: 241 bits (616), Expect = 9.700e-74 Identity = 116/181 (64.09%), Postives = 135/181 (74.59%), Query Frame = 1
Query: 1 ICERIRENGEPGFAWLENMRTFGRMADPKNTRDVKAMGGNPCLEQTLESFEMCCLVETFPDKHESLEDFLETLRFAFMYAKTVTLGGTQWEQTNEILFRNRRIGCSMSGLAEFVTSRGLGTLHQWCEEGYRAISTIDQEISGEAKDWKIFSGAESPPPPSFQRRHIKPSGTVSLLAGATPG 543
I ERI NGEPGFAWLENMR FGRM K+ RD A GGNPCLEQTLES+EMCCLVETFP H+SLEDFLETL++A+MYAKTVTLG TQW +TNE++ RNRRIGCSMSG+A+F+++RGL +WCE GY I +D++IS P S + IKPSGTVSLLAGATPG
Sbjct: 366 IAERIVRNGEPGFAWLENMRNFGRMNGIKDDRDCNACGGNPCLEQTLESYEMCCLVETFPYNHDSLEDFLETLKYAYMYAKTVTLGQTQWPRTNEVMKRNRRIGCSMSGIAQFISNRGLNEFQRWCEAGYDRIQEVDKQIS-----------TRFAIPRSIKTTSIKPSGTVSLLAGATPG 535
BLAST of mRNA_H-elongata_contig77483.15429.1 vs. uniprot
Match: A0A0A0UXJ8_9VIRU (Ribonucleotide reductase (Fragment) n=1 Tax=uncultured virus TaxID=340016 RepID=A0A0A0UXJ8_9VIRU) HSP 1 Score: 231 bits (588), Expect = 1.780e-73 Identity = 106/174 (60.92%), Postives = 130/174 (74.71%), Query Frame = 1
Query: 22 NGEPGFAWLENMRTFGRMADPKNTRDVKAMGGNPCLEQTLESFEMCCLVETFPDKHESLEDFLETLRFAFMYAKTVTLGGTQWEQTNEILFRNRRIGCSMSGLAEFVTSRGLGTLHQWCEEGYRAISTIDQEISGEAKDWKIFSGAESPPPPSFQRRHIKPSGTVSLLAGATPG 543
NGEPGFAWL NM+ +GRM D N +D +A GGNPCLEQTLES+E+CCLVETFP+ HES+ED+LETL++A++YAKTVTLG T W +TN ++ RNRRIGCSMSG+A+FV +GLG L W ++GY I T+D+ S DW P S + IKPSGTVSLLAGATPG
Sbjct: 2 NGEPGFAWLHNMKAYGRMVDAPNWKDRRASGGNPCLEQTLESYELCCLVETFPNNHESVEDYLETLKYAYLYAKTVTLGQTHWAETNRVMLRNRRIGCSMSGIAQFVADKGLGQLQAWMDKGYAHIQTLDENYS----DWMAI-------PRSIKTTSIKPSGTVSLLAGATPG 164
BLAST of mRNA_H-elongata_contig77483.15429.1 vs. uniprot
Match: A0A1Y1XU27_9FUNG (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XU27_9FUNG) HSP 1 Score: 241 bits (615), Expect = 1.680e-72 Identity = 107/181 (59.12%), Postives = 137/181 (75.69%), Query Frame = 1
Query: 1 ICERIRENGEPGFAWLENMRTFGRMADPKNTRDVKAMGGNPCLEQTLESFEMCCLVETFPDKHESLEDFLETLRFAFMYAKTVTLGGTQWEQTNEILFRNRRIGCSMSGLAEFVTSRGLGTLHQWCEEGYRAISTIDQEISGEAKDWKIFSGAESPPPPSFQRRHIKPSGTVSLLAGATPG 543
+C R+ +NGEPGFAWLEN R++GRM++P N +D +AMGGNPCLEQTLESFE+CCLVE FP H SLEDFLETL AF+YAKTVTLG T W+++N+++ RNRRIG +SG+A+F++ RGL WCEEGY+A+ ID+++S +W P S + +KPSGTVSLLAGATPG
Sbjct: 362 VCSRVIKNGEPGFAWLENARSYGRMSEPMNMKDARAMGGNPCLEQTLESFELCCLVEVFPSNHNSLEDFLETLESAFLYAKTVTLGNTHWKESNQVMLRNRRIGTGLSGIAQFISKRGLHEFKNWCEEGYKAVQQIDKQVS----EWFCI-------PRSIKTTTVKPSGTVSLLAGATPG 531
BLAST of mRNA_H-elongata_contig77483.15429.1 vs. uniprot
Match: H3GD43_PHYRM (Ribonucleoside-triphosphate reductase (thioredoxin) n=4 Tax=Phytophthora TaxID=4783 RepID=H3GD43_PHYRM) HSP 1 Score: 237 bits (604), Expect = 8.540e-72 Identity = 116/181 (64.09%), Postives = 134/181 (74.03%), Query Frame = 1
Query: 1 ICERIRENGEPGFAWLENMRTFGRMADPKNTRDVKAMGGNPCLEQTLESFEMCCLVETFPDKHESLEDFLETLRFAFMYAKTVTLGGTQWEQTNEILFRNRRIGCSMSGLAEFVTSRGLGTLHQWCEEGYRAISTIDQEISGEAKDWKIFSGAESPPPPSFQRRHIKPSGTVSLLAGATPG 543
I ERI NGEPGFAWLENMR +GRM K+ RD A GGNPCLEQTLES+EMCCLVETFP H+SLEDFLETL+FA+MYAKTVTLG TQW +TN ++ RNRRIGCSMSG+A+F+++RGL +WCE GY I +D+ IS A P S + IKPSGTVSLLAGATPG
Sbjct: 288 IAERIVLNGEPGFAWLENMRNYGRMNGIKDGRDRNASGGNPCLEQTLESYEMCCLVETFPFNHDSLEDFLETLKFAYMYAKTVTLGQTQWPRTNNVMQRNRRIGCSMSGIAQFISNRGLNEFQRWCEAGYDRIQQVDKLIS-----------ARFAIPRSIKTTSIKPSGTVSLLAGATPG 457
BLAST of mRNA_H-elongata_contig77483.15429.1 vs. uniprot
Match: D0MVF9_PHYIT (Ribonucleoside-triphosphate reductase (thioredoxin) n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MVF9_PHYIT) HSP 1 Score: 238 bits (606), Expect = 8.580e-72 Identity = 115/181 (63.54%), Postives = 134/181 (74.03%), Query Frame = 1
Query: 1 ICERIRENGEPGFAWLENMRTFGRMADPKNTRDVKAMGGNPCLEQTLESFEMCCLVETFPDKHESLEDFLETLRFAFMYAKTVTLGGTQWEQTNEILFRNRRIGCSMSGLAEFVTSRGLGTLHQWCEEGYRAISTIDQEISGEAKDWKIFSGAESPPPPSFQRRHIKPSGTVSLLAGATPG 543
I E+I NGEPGFAWL+NMR FGRM K+ RD A GGNPCLEQTLES+EMCCLVETFP HE+LEDFLETL+ A+MYAKTVTLG TQW +TNE++ RNRRIGCSMSG+A+F++SRGL +WCE GY I +D++IS P S + IKPSGTVSLLAGATPG
Sbjct: 350 IAEQIVRNGEPGFAWLDNMRNFGRMNGIKDDRDRNASGGNPCLEQTLESYEMCCLVETFPYNHENLEDFLETLKHAYMYAKTVTLGQTQWPRTNEVMKRNRRIGCSMSGIAQFISSRGLNEFQRWCEAGYDRIQEVDKQIS-----------TRFAIPRSIKTTSIKPSGTVSLLAGATPG 519 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77483.15429.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig77483.15429.1 >prot_H-elongata_contig77483.15429.1 ID=prot_H-elongata_contig77483.15429.1|Name=mRNA_H-elongata_contig77483.15429.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=181bp ICERIRENGEPGFAWLENMRTFGRMADPKNTRDVKAMGGNPCLEQTLESFback to top mRNA from alignment at H-elongata_contig77483:620..2292+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig77483.15429.1 ID=mRNA_H-elongata_contig77483.15429.1|Name=mRNA_H-elongata_contig77483.15429.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1673bp|location=Sequence derived from alignment at H-elongata_contig77483:620..2292+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig77483:620..2292+ >mRNA_H-elongata_contig77483.15429.1 ID=mRNA_H-elongata_contig77483.15429.1|Name=mRNA_H-elongata_contig77483.15429.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1086bp|location=Sequence derived from alignment at H-elongata_contig77483:620..2292+ (Himanthalia elongata Himel1 dioecious)back to top |