prot_H-elongata_contig77433.15421.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig77433.15421.1
Unique Name	prot_H-elongata_contig77433.15421.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	92

Homology

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BLAST of mRNA_H-elongata_contig77433.15421.1 vs. uniprot
Match: D7FN57_ECTSI (Glutamate--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN57_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 1.750e-31
Identity = 59/65 (90.77%), Postives = 62/65 (95.38%), Query Frame = 0

Query:    1 QVVTRFPPEPSGYLHIGHVKACLLNQYYAQVYGGKLIVRFDDTNPSKEKEEYADSIVKDLRTLGV 65
            QVVTRFPPEPSGYLHIGHVKACLLNQYYAQ YGGK+IVRFDDTNPSKEKEEYA SIV+DL TLG+
Sbjct:  347 QVVTRFPPEPSGYLHIGHVKACLLNQYYAQHYGGKMIVRFDDTNPSKEKEEYAASIVQDLATLGI 411

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BLAST of mRNA_H-elongata_contig77433.15421.1 vs. uniprot
Match: A0A7R9ZTU8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7R9ZTU8_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.040e-30
Identity = 53/74 (71.62%), Postives = 63/74 (85.14%), Query Frame = 0

Query:    1 QVVTRFPPEPSGYLHIGHVKACLLNQYYAQVYGGKLIVRFDDTNPSKEKEEYADSIVKDLRTLGVSFAIAAQSS 74
            QVVTRFPPEPSGYLH+GH KACLLN YYA+ Y G+LI+RFDDTNPSKEKEEY +SI++DL TLGV  ++   +S
Sbjct:   37 QVVTRFPPEPSGYLHVGHAKACLLNDYYARRYKGRLIIRFDDTNPSKEKEEYQESILQDLTTLGVKGSVLTYTS 110

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BLAST of mRNA_H-elongata_contig77433.15421.1 vs. uniprot
Match: A0A7S4AI61_9STRA (Glutamate--tRNA ligase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AI61_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.360e-29
Identity = 57/82 (69.51%), Postives = 67/82 (81.71%), Query Frame = 0

Query:    1 QVVTRFPPEPSGYLHIGHVKACLLNQYYAQVYGGKLIVRFDDTNPSKEKEEYADSIVKDLRTLGVSFAIAAQSSPVSLSILK 82
            QVVTRFPPEPSGYLH+GH KACLLN YYA+ Y G++IVRFDDTNPSKEKEEY  SIV+DL+TLGV+  +   +S   L+I K
Sbjct:  370 QVVTRFPPEPSGYLHVGHAKACLLNDYYARRYKGRMIVRFDDTNPSKEKEEYQQSIVEDLKTLGVNNDVLTYTSDYILAIQK 451

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BLAST of mRNA_H-elongata_contig77433.15421.1 vs. uniprot
Match: A0A1E7EUW5_9STRA (Glutamate--tRNA ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUW5_9STRA)

HSP 1 Score: 117 bits (293), Expect = 7.200e-29
Identity = 56/90 (62.22%), Postives = 67/90 (74.44%), Query Frame = 0

Query:    1 QVVTRFPPEPSGYLHIGHVKACLLNQYYAQVYGGKLIVRFDDTNPSKEKEEYADSIVKDLRTLGVSFAIAAQSSPVSLSILKAVHDLFSN 90
            QVVTRFPPEPSGYLH+GH KACLLN YYA+ Y G+LI+RFDDTNPSKEKEEY  SI++DL TLGV   +   +S    +I K    + +N
Sbjct:   11 QVVTRFPPEPSGYLHVGHAKACLLNDYYAKRYQGRLIIRFDDTNPSKEKEEYQQSILEDLATLGVKGDVLTYTSDYITAIQKYALQMIAN 100

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BLAST of mRNA_H-elongata_contig77433.15421.1 vs. uniprot
Match: A0A7S2GKB1_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2GKB1_9DINO)

HSP 1 Score: 108 bits (270), Expect = 1.180e-28
Identity = 49/65 (75.38%), Postives = 58/65 (89.23%), Query Frame = 0

Query:    1 QVVTRFPPEPSGYLHIGHVKACLLNQYYAQVYGGKLIVRFDDTNPSKEKEEYADSIVKDLRTLGV 65
            +VVTRFPPEPSGYLHIGH KA LLN  YAQ+YGGK+++RFDDTNPSKEK EY +SIV+DL+ LG+
Sbjct:    1 KVVTRFPPEPSGYLHIGHAKAALLNYTYAQLYGGKMLLRFDDTNPSKEKMEYQESIVEDLKLLGI 65

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BLAST of mRNA_H-elongata_contig77433.15421.1 vs. uniprot
Match: A0A7S4E5R1_9STRA (Glutamate--tRNA ligase (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5R1_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.190e-28
Identity = 56/79 (70.89%), Postives = 65/79 (82.28%), Query Frame = 0

Query:    1 QVVTRFPPEPSGYLHIGHVKACLLNQYYAQVYGGKLIVRFDDTNPSKEKEEYADSIVKDLRTLGVSFAIAAQSSPVSLS 79
            +VVTRFPPEPSGYLHIGH KA LLN YYA+ YGG+L+VRFDDTNPSKEK EYAD+I+KDL+TLGV      +   V+LS
Sbjct:  315 EVVTRFPPEPSGYLHIGHAKAVLLNDYYARRYGGRLLVRFDDTNPSKEKGEYADNILKDLKTLGVDVEADKKDGYVTLS 393

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BLAST of mRNA_H-elongata_contig77433.15421.1 vs. uniprot
Match: A0A7R9ZU84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7R9ZU84_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.500e-28
Identity = 53/74 (71.62%), Postives = 63/74 (85.14%), Query Frame = 0

Query:    1 QVVTRFPPEPSGYLHIGHVKACLLNQYYAQVYGGKLIVRFDDTNPSKEKEEYADSIVKDLRTLGVSFAIAAQSS 74
            QVVTRFPPEPSGYLH+GH KACLLN YYA+ Y G+LI+RFDDTNPSKEKEEY +SI++DL TLGV  ++   +S
Sbjct:  379 QVVTRFPPEPSGYLHVGHAKACLLNDYYARRYKGRLIIRFDDTNPSKEKEEYQESILQDLTTLGVKGSVLTYTS 452

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BLAST of mRNA_H-elongata_contig77433.15421.1 vs. uniprot
Match: A0A1E5R2K5_9ASCO (Glutamate--tRNA ligase n=1 Tax=Hanseniaspora osmophila TaxID=56408 RepID=A0A1E5R2K5_9ASCO)

HSP 1 Score: 115 bits (289), Expect = 4.010e-28
Identity = 54/74 (72.97%), Postives = 61/74 (82.43%), Query Frame = 0

Query:    1 QVVTRFPPEPSGYLHIGHVKACLLNQYYAQVYGGKLIVRFDDTNPSKEKEEYADSIVKDLRTLGVSFAIAAQSS 74
            QVVTRFPPEPSGYLHIGH KA LLNQY+AQ + GKLI+RFDDTNPSKEKEEY DSI++DL  LG+   +   SS
Sbjct:  209 QVVTRFPPEPSGYLHIGHAKAALLNQYFAQEFDGKLIIRFDDTNPSKEKEEYQDSIIEDLELLGIKGDVLTYSS 282

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BLAST of mRNA_H-elongata_contig77433.15421.1 vs. uniprot
Match: A0A448ZPH2_9STRA (Glutamate--tRNA ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZPH2_9STRA)

HSP 1 Score: 115 bits (287), Expect = 7.730e-28
Identity = 53/74 (71.62%), Postives = 62/74 (83.78%), Query Frame = 0

Query:    1 QVVTRFPPEPSGYLHIGHVKACLLNQYYAQVYGGKLIVRFDDTNPSKEKEEYADSIVKDLRTLGVSFAIAAQSS 74
            +VVTRFPPEPSGYLH+GH KACLLN YYA+ Y G++IVRFDDTNPSKEKEEY  SIV+DL+TLGV   +   +S
Sbjct:  376 RVVTRFPPEPSGYLHVGHAKACLLNDYYARRYKGRMIVRFDDTNPSKEKEEYQQSIVEDLKTLGVKNDVLTYTS 449

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BLAST of mRNA_H-elongata_contig77433.15421.1 vs. uniprot
Match: A0A433D6U5_9FUNG (tRNA synthetases class I, catalytic domain-containing protein (Fragment) n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433D6U5_9FUNG)

HSP 1 Score: 111 bits (278), Expect = 1.470e-27
Identity = 51/74 (68.92%), Postives = 60/74 (81.08%), Query Frame = 0

Query:    1 QVVTRFPPEPSGYLHIGHVKACLLNQYYAQVYGGKLIVRFDDTNPSKEKEEYADSIVKDLRTLGVSFAIAAQSS 74
            +VVTRFPPEPSGYLHIGH KA LLNQY+AQ YGGK+I+RFDDTNPSKEK E+ +SI +DL  +GV   I   +S
Sbjct:  216 EVVTRFPPEPSGYLHIGHAKAALLNQYFAQTYGGKMIIRFDDTNPSKEKTEFEESIKEDLALIGVESRIVTHTS 289

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig77433.15421.1 vs. uniprot

BLAST of mRNA_H-elongata_contig77433.15421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FN57_ECTSI	1.750e-31	90.77	Glutamate--tRNA ligase n=2 Tax=Ectocarpus TaxID=28...	[more]
A0A7R9ZTU8_9STRA	1.040e-30	71.62	Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit...	[more]
A0A7S4AI61_9STRA	1.360e-29	69.51	Glutamate--tRNA ligase n=1 Tax=Pseudo-nitzschia au...	[more]
A0A1E7EUW5_9STRA	7.200e-29	62.22	Glutamate--tRNA ligase n=1 Tax=Fragilariopsis cyli...	[more]
A0A7S2GKB1_9DINO	1.180e-28	75.38	Hypothetical protein (Fragment) n=1 Tax=Alexandriu...	[more]
A0A7S4E5R1_9STRA	1.190e-28	70.89	Glutamate--tRNA ligase (Fragment) n=2 Tax=Pelagomo...	[more]
A0A7R9ZU84_9STRA	1.500e-28	71.62	Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit...	[more]
A0A1E5R2K5_9ASCO	4.010e-28	72.97	Glutamate--tRNA ligase n=1 Tax=Hanseniaspora osmop...	[more]
A0A448ZPH2_9STRA	7.730e-28	71.62	Glutamate--tRNA ligase n=1 Tax=Pseudo-nitzschia mu...	[more]
A0A433D6U5_9FUNG	1.470e-27	68.92	tRNA synthetases class I, catalytic domain-contain...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000924	Glutamyl/glutaminyl-tRNA synthetase	PRINTS	PR00987	TRNASYNTHGLU	coord: 34..47 score: 48.21 coord: 5..17 score: 66.54 coord: 19..30 score: 33.33
IPR020058	Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain	PFAM	PF00749	tRNA-synt_1c	coord: 1..73 e-value: 3.7E-29 score: 101.6
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 1..90 e-value: 5.0E-31 score: 109.8
None	No IPR available	PANTHER	PTHR43097:SF5	GLUTAMATE--TRNA LIGASE, CYTOPLASMIC	coord: 1..72
None	No IPR available	PANTHER	PTHR43097	GLUTAMINE-TRNA LIGASE	coord: 1..72
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 1..68
IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site	PROSITE	PS00178	AA_TRNA_LIGASE_I	coord: 8..19

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig77433	contig	H-elongata_contig77433:130..405 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig77433.15421.1	mRNA_H-elongata_contig77433.15421.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig77433 130..405 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig77433.15421.1 ID=prot_H-elongata_contig77433.15421.1|Name=mRNA_H-elongata_contig77433.15421.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp
QVVTRFPPEPSGYLHIGHVKACLLNQYYAQVYGGKLIVRFDDTNPSKEKE
EYADSIVKDLRTLGVSFAIAAQSSPVSLSILKAVHDLFSNR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000924	Glu/Gln-tRNA-synth
IPR020058	Glu/Gln-tRNA-synth_Ib_cat-dom
IPR014729	Rossmann-like_a/b/a_fold
IPR001412	aa-tRNA-synth_I_CS