prot_H-elongata_contig77427.15420.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig77427.15420.1 vs. uniprot
Match: UPI0006D93A63 (uncharacterized protein LOC106704261 n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0006D93A63) HSP 1 Score: 60.8 bits (146), Expect = 3.950e-9 Identity = 31/69 (44.93%), Postives = 47/69 (68.12%), Query Frame = 0
Query: 3 RWVRFFRSLLNAKSDMLDPDIPKRLPQHPVACALGIEPTEEDIATAMKAIKNAQAVGPDGLPAEVLKLG 71
RW + ++ LLN +S + D I + +PQ+PV AL PT E++ A++ +KN +A GPDG+PAEV K+G
Sbjct: 200 RWKKHYQKLLNLESTVTDDTI-ESIPQYPVREALASPPTFEEVCQAIRQMKNNKAPGPDGIPAEVFKVG 267
BLAST of mRNA_H-elongata_contig77427.15420.1 vs. uniprot
Match: UPI0006D922B9 (RNA-directed DNA polymerase from mobile element jockey-like n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0006D922B9) HSP 1 Score: 60.1 bits (144), Expect = 4.540e-9 Identity = 31/69 (44.93%), Postives = 46/69 (66.67%), Query Frame = 0
Query: 3 RWVRFFRSLLNAKSDMLDPDIPKRLPQHPVACALGIEPTEEDIATAMKAIKNAQAVGPDGLPAEVLKLG 71
RW ++ LLN +S + D I + +PQ+PV AL PT E++ A++ +KN +A GPDG+PAEV K+G
Sbjct: 40 RWKEHYQKLLNLESTVTDDTI-ESIPQYPVREALASPPTFEEVCEAIRQMKNNKAPGPDGIPAEVFKVG 107
BLAST of mRNA_H-elongata_contig77427.15420.1 vs. uniprot
Match: A0A6H5JRE2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE2_9PHAE) HSP 1 Score: 54.3 bits (129), Expect = 7.360e-8 Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0
Query: 1 RERWVRFFRSLLNAKSDMLDPDIPKRLPQHPVACALGIEPTEEDIATAMKAIKNAQAVGPDGLPAEVLKL 70
R+RW R+F LLN +S +D R+ Q P L P+ ++ A++ + N +AVGPD LPAE++KL
Sbjct: 30 RQRWARWFHKLLNTRSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKL 99
BLAST of mRNA_H-elongata_contig77427.15420.1 vs. uniprot
Match: A0A6H5KE31_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE31_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 3.060e-7 Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
Query: 1 RERWVRFFRSLLNAKSDMLDPDIPKRLPQHPVACALGIEPTEEDIATAMKAIKNAQAVGPDGLPAEVLKL 70
R+RW R+F LLN KS +D R+ Q P L P+ ++ A++ + N +AVGPD LPAE++KL
Sbjct: 30 RQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKL 99
BLAST of mRNA_H-elongata_contig77427.15420.1 vs. uniprot
Match: A0A6H5JY74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY74_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 3.060e-7 Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
Query: 1 RERWVRFFRSLLNAKSDMLDPDIPKRLPQHPVACALGIEPTEEDIATAMKAIKNAQAVGPDGLPAEVLKL 70
R+RW R+F LLN KS +D R+ Q P L P+ ++ A++ + N +AVGPD LPAE++KL
Sbjct: 328 RQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKL 397
BLAST of mRNA_H-elongata_contig77427.15420.1 vs. uniprot
Match: A0A6H5K3M1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3M1_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 3.100e-7 Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
Query: 1 RERWVRFFRSLLNAKSDMLDPDIPKRLPQHPVACALGIEPTEEDIATAMKAIKNAQAVGPDGLPAEVLKL 70
R+RW R+F LLN KS +D R+ Q P L P+ ++ A++ + N +AVGPD LPAE++KL
Sbjct: 436 RQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKL 505
BLAST of mRNA_H-elongata_contig77427.15420.1 vs. uniprot
Match: A0A6H5KKB2_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKB2_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 3.100e-7 Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
Query: 1 RERWVRFFRSLLNAKSDMLDPDIPKRLPQHPVACALGIEPTEEDIATAMKAIKNAQAVGPDGLPAEVLKL 70
R+RW R+F LLN KS +D R+ Q P L P+ ++ A++ + N +AVGPD LPAE++KL
Sbjct: 30 RQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKL 99
BLAST of mRNA_H-elongata_contig77427.15420.1 vs. uniprot
Match: A0A6H5K8Z5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z5_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 3.130e-7 Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
Query: 1 RERWVRFFRSLLNAKSDMLDPDIPKRLPQHPVACALGIEPTEEDIATAMKAIKNAQAVGPDGLPAEVLKL 70
R+RW R+F LLN KS +D R+ Q P L P+ ++ A++ + N +AVGPD LPAE++KL
Sbjct: 308 RQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKL 377
BLAST of mRNA_H-elongata_contig77427.15420.1 vs. uniprot
Match: A0A6H5JUB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUB0_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 3.140e-7 Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
Query: 1 RERWVRFFRSLLNAKSDMLDPDIPKRLPQHPVACALGIEPTEEDIATAMKAIKNAQAVGPDGLPAEVLKL 70
R+RW R+F LLN KS +D R+ Q P L P+ ++ A++ + N +AVGPD LPAE++KL
Sbjct: 93 RQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKL 162
BLAST of mRNA_H-elongata_contig77427.15420.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 3.140e-7 Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
Query: 1 RERWVRFFRSLLNAKSDMLDPDIPKRLPQHPVACALGIEPTEEDIATAMKAIKNAQAVGPDGLPAEVLKL 70
R+RW R+F LLN KS +D R+ Q P L P+ ++ A++ + N +AVGPD LPAE++KL
Sbjct: 446 RQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKL 515 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77427.15420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig77427.15420.1 ID=prot_H-elongata_contig77427.15420.1|Name=mRNA_H-elongata_contig77427.15420.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bpback to top |