prot_H-elongata_contig77256.15401.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig77256.15401.1
Unique Nameprot_H-elongata_contig77256.15401.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length195
Homology
BLAST of mRNA_H-elongata_contig77256.15401.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 194 bits (494), Expect = 5.910e-54
Identity = 100/189 (52.91%), Postives = 126/189 (66.67%), Query Frame = 0
Query:    6 IRKVNPQIAPGLSGLRHCHLQNVRDDDLEVDIARLPRTIFKSKTLPPLFWALHTGANLSALGAKARPVACGDVFRRIIGATFCSDYSKQLAGHFEPKGQHSVACPGGVDIIARAVSLDFAEGCTILSFDGKNAFNSIYRHAFLPALATVVPVASGYATNLYARDPPKLLFAMDNGTTAVIDSARGVQQG 194
            IR+ NPQ +PG SGLR   LQ+    +L   IA+L   IF    LP  FW LHT ANLSA+G K RP+A GD+FRRI+G   C  Y   LA HFEP+GQ+ VA PGG +++A    L   +G  +L++D +NAFNS+ R A LPALA ++P    YATN+YAR+PPKLL+  D+G  AVI SA GVQQG
Sbjct: 1167 IRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSGM-AVIPSATGVQQG 1354          
BLAST of mRNA_H-elongata_contig77256.15401.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 1.810e-47
Identity = 92/195 (47.18%), Postives = 114/195 (58.46%), Query Frame = 0
Query:    2 IGDAIRKVNPQIAPGLSGLRHCHLQ--NVRDDDLEVDIARLPRTIFKSKTLPPLFWALHTGANLSALGAKARPVACGDVFRRIIGATFCSDYSKQLAGHFEPKGQHSVACPGGVDIIARAVSLDFAEGCTILSFDGKNAFNSIYRHAFLPALATVVPVASGYATNLYARDPPKLLFAMDNGTTAVIDSARGVQQG 194
            I   ++K NPQ APG  GLR  +LQ   + D   E       +  +    LP  FW LHT ANLSALG K RP+A G V RRII  +FC  Y   +A  FE   Q     PGGV+I+A   +L   +G TILSFDGKNA+NS+ R + LPA+AT  P    Y  N+YAR   KLLF M++G+  V+ S RGVQQG
Sbjct:  125 IKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQG 319          
BLAST of mRNA_H-elongata_contig77256.15401.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 8.210e-46
Identity = 92/195 (47.18%), Postives = 114/195 (58.46%), Query Frame = 0
Query:    2 IGDAIRKVNPQIAPGLSGLRHCHLQ--NVRDDDLEVDIARLPRTIFKSKTLPPLFWALHTGANLSALGAKARPVACGDVFRRIIGATFCSDYSKQLAGHFEPKGQHSVACPGGVDIIARAVSLDFAEGCTILSFDGKNAFNSIYRHAFLPALATVVPVASGYATNLYARDPPKLLFAMDNGTTAVIDSARGVQQG 194
            I   ++K NPQ APG  GLR  +LQ   + D   E       +  +    LP  FW LHT ANLSALG K RP+A G V RRII  +FC  Y   +A  FE   Q     PGGV+I+A   +L   +G TILSFDGKNA+NS+ R + LPA+AT  P    Y  N+YAR   KLLF M++G+  V+ S RGVQQG
Sbjct:  125 IKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQG 319          
BLAST of mRNA_H-elongata_contig77256.15401.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 2.200e-45
Identity = 92/195 (47.18%), Postives = 114/195 (58.46%), Query Frame = 0
Query:    2 IGDAIRKVNPQIAPGLSGLRHCHLQ--NVRDDDLEVDIARLPRTIFKSKTLPPLFWALHTGANLSALGAKARPVACGDVFRRIIGATFCSDYSKQLAGHFEPKGQHSVACPGGVDIIARAVSLDFAEGCTILSFDGKNAFNSIYRHAFLPALATVVPVASGYATNLYARDPPKLLFAMDNGTTAVIDSARGVQQG 194
            I   ++K NPQ APG  GLR  +LQ   + D   E       +  +    LP  FW LHT ANLSALG K RP+A G V RRII  +FC  Y   +A  FE   Q     PGGV+I+A   +L   +G TILSFDGKNA+NS+ R + LPA+AT  P    Y  N+YAR   KLLF M++G+  V+ S RGVQQG
Sbjct:  125 IKQTVKKANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQG 319          
BLAST of mRNA_H-elongata_contig77256.15401.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 4.140e-45
Identity = 92/195 (47.18%), Postives = 114/195 (58.46%), Query Frame = 0
Query:    2 IGDAIRKVNPQIAPGLSGLRHCHLQ--NVRDDDLEVDIARLPRTIFKSKTLPPLFWALHTGANLSALGAKARPVACGDVFRRIIGATFCSDYSKQLAGHFEPKGQHSVACPGGVDIIARAVSLDFAEGCTILSFDGKNAFNSIYRHAFLPALATVVPVASGYATNLYARDPPKLLFAMDNGTTAVIDSARGVQQG 194
            I   ++K NPQ APG  GLR  +LQ   + D   E       +  +    LP  FW LHT ANLSALG K RP+A G V RRII  +FC  Y   +A  FE   Q     PGGV+I+A   +L   +G TILSFDGKNA+NS+ R + LPA+AT  P    Y  N+YAR   KLLF M++G+  V+ S RGVQQG
Sbjct:  125 IKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQG 319          
BLAST of mRNA_H-elongata_contig77256.15401.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 4.720e-41
Identity = 77/153 (50.33%), Postives = 96/153 (62.75%), Query Frame = 0
Query:   42 RTIFKSKTLPPLFWALHTGANLSALGAKARPVACGDVFRRIIGATFCSDYSKQLAGHFEPKGQHSVACPGGVDIIARAVSLDFAEGCTILSFDGKNAFNSIYRHAFLPALATVVPVASGYATNLYARDPPKLLFAMDNGTTAVIDSARGVQQG 194
            +  +    LP  FW LHT ANLSALG K RP+A G V RRII  +FC  Y   +A  FE   Q     PGGV+I+A   +L   +G TILSFDGKNA+NS+ R + LPA+AT  P  + Y  N+YAR   KLLF M++G+  V+ S RGVQQG
Sbjct:   15 KVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQG 167          
BLAST of mRNA_H-elongata_contig77256.15401.1 vs. uniprot
Match: A0A6H5L3H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H3_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 1.730e-39
Identity = 76/164 (46.34%), Postives = 96/164 (58.54%), Query Frame = 0
Query:   31 DDLEVDIARLPRTIFK-SKTLPPLFWALHTGANLSALGAKARPVACGDVFRRIIGATFCSDYSKQLAGHFEPKGQHSVACPGGVDIIARAVSLDFAEGCTILSFDGKNAFNSIYRHAFLPALATVVPVASGYATNLYARDPPKLLFAMDNGTTAVIDSARGVQQ 193
            DD    +A     +F     LP LFW   T A+LSALG K RP+A G V RRII  +FC  Y + +A  FE   Q     PGGV+I+A   +L   +G TILSFDG+NA+NSI R + L A+AT  P    Y  NLYAR   KLLF M++G+  ++ S R VQQ
Sbjct:    3 DDFSETLADFSYKVFYYGDELPDLFWGFQTSASLSALGEKKRPIAVGGVLRRIISGSFCRQYKQGIADIFEASNQFGGGVPGGVEIVASTAALSHQQGSTILSFDGRNAYNSILRSSILTAVATHTPHLVKYFGNLYARIKAKLLFKMEDGSIEMVRSQREVQQ 166          
BLAST of mRNA_H-elongata_contig77256.15401.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 1.010e-37
Identity = 75/153 (49.02%), Postives = 94/153 (61.44%), Query Frame = 0
Query:   42 RTIFKSKTLPPLFWALHTGANLSALGAKARPVACGDVFRRIIGATFCSDYSKQLAGHFEPKGQHSVACPGGVDIIARAVSLDFAEGCTILSFDGKNAFNSIYRHAFLPALATVVPVASGYATNLYARDPPKLLFAMDNGTTAVIDSARGVQQG 194
            +  +    LP   W LHT ANLSALG K RP+A G V RRII  +F   Y   +A  FE   Q     PGGV+I+A   +L   +G TILSFDGKNA+NS+ R + LPA+AT+ P    Y  N+YAR   KLLF M++G+  V+ S RGVQQG
Sbjct:   15 KVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQG 167          
BLAST of mRNA_H-elongata_contig77256.15401.1 vs. uniprot
Match: A0A6H5KQE6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE6_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 5.470e-26
Identity = 59/135 (43.70%), Postives = 73/135 (54.07%), Query Frame = 0
Query:   31 DDLEVDIARLPRTIFK-SKTLPPLFWALHTGANLSALGAKARPVACGDVFRRII------------GATFCSDYSKQLAGHFEPKGQHSVACPGGVDIIARAVSLDFAEGCTILSFDGKNAFNSIYRHAFLPALA 152
            DD    +A     +F     LP LFW LHT A+LSALG K RP+A G V RRII              +FC  Y + +A  FE   Q     PGGV+I+A   +    +G TILSFDGKNA+NSI R + L A+A
Sbjct:    3 DDFSATLADFSHKVFYYGDELPDLFWGLHTSASLSALGEKKRPIAVGGVLRRIIXIXXXXXXXXXISGSFCRQYKQGIADIFEASNQFGGGVPGGVEIVASTAAPSHQQGSTILSFDGKNAYNSILRSSILTAVA 137          
BLAST of mRNA_H-elongata_contig77256.15401.1 vs. uniprot
Match: A0A812UIA4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UIA4_9DINO)

HSP 1 Score: 74.3 bits (181), Expect = 4.340e-12
Identity = 57/198 (28.79%), Postives = 93/198 (46.97%), Query Frame = 0
Query:    2 IGDAIRKVNPQIAPGLSGLRHCHLQNVRDDDLEVDIARLPRTIFKSKTLPPLFWALHTGANLSALGAK---ARPVACGDVFRRIIGATFCSDYSKQLAGHFEPKGQHSVACPGGVDIIARAV--SLDFAEGCTILSFDGKNAFNSIYRHAFLPALATVVPVASGYATNLYARDPPKLLFAMDNGTTAVIDSARGVQQG 194
            + DA+R      A GLSG      + + DD+  ++       +      PP+       + L+AL       R +A GDVFRR++       Y+ +L     P  Q ++    G D +A  +  +++F    T++S DG++A+++I R A L  L+ VVP    +A  +YAR     L+  D GT   I  A G++QG
Sbjct:  259 VADALRTSKRGSAAGLSGATVEFYKLLLDDEGALEAFTFVVNVAARAQAPPVALDALALSRLTALRKPQGGVRGIATGDVFRRLVSRALARAYAGELDEATRPF-QFALRTRAGTDSLAAMLRSAVEFDPRATVVSLDGRSAYDTISRAAILSKLSEVVPALLPFARAIYARTST-FLWWDDEGTLHEISQAEGIEQG 454          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77256.15401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN5.910e-5452.91Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5KQ62_9PHAE1.810e-4747.18Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KGJ4_9PHAE8.210e-4647.18Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LN63_9PHAE2.200e-4547.18Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCM0_9PHAE4.140e-4547.18Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KSY9_9PHAE4.720e-4150.33Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L3H3_9PHAE1.730e-3946.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1H0_9PHAE1.010e-3749.02Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQE6_9PHAE5.470e-2643.70Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A812UIA4_9DINO4.340e-1228.79Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77256contigH-elongata_contig77256:1352..1936 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77256.15401.1mRNA_H-elongata_contig77256.15401.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig77256 1352..1936 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig77256.15401.1 ID=prot_H-elongata_contig77256.15401.1|Name=mRNA_H-elongata_contig77256.15401.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=195bp
AIGDAIRKVNPQIAPGLSGLRHCHLQNVRDDDLEVDIARLPRTIFKSKTL
PPLFWALHTGANLSALGAKARPVACGDVFRRIIGATFCSDYSKQLAGHFE
PKGQHSVACPGGVDIIARAVSLDFAEGCTILSFDGKNAFNSIYRHAFLPA
LATVVPVASGYATNLYARDPPKLLFAMDNGTTAVIDSARGVQQG*
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