prot_H-elongata_contig77250.15400.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig77250.15400.1
Unique Nameprot_H-elongata_contig77250.15400.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length72
Homology
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BLAST of mRNA_H-elongata_contig77250.15400.1 vs. uniprot
Match: D8LT96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT96_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 2.330e-25
Identity = 51/62 (82.26%), Postives = 57/62 (91.94%), Query Frame = 0 
Query:   10 QGWLELNPSNMAAVFCANGKARTSVLLACFLRFEGEESSALEAYRRVCAKRDPTQEPEQASL 71
            +GWL+L+P NMAAVFCANGKARTSVLLAC+LRFEGEES+ALEAYRRV AKRDP Q+PEQ  L
Sbjct:  147 KGWLDLDPENMAAVFCANGKARTSVLLACYLRFEGEESTALEAYRRVWAKRDPEQKPEQVIL 208
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BLAST of mRNA_H-elongata_contig77250.15400.1 vs. uniprot
Match: A0A6H5JR06_9PHAE (FMN protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR06_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 3.220e-25
Identity = 51/62 (82.26%), Postives = 57/62 (91.94%), Query Frame = 0 
Query:   10 QGWLELNPSNMAAVFCANGKARTSVLLACFLRFEGEESSALEAYRRVCAKRDPTQEPEQASL 71
            +GWL+L+P NMAAVFCANGKARTSVLLAC+LRFEGEES+ALEAYRRV AKRDP Q+PEQ  L
Sbjct:  147 KGWLDLDPENMAAVFCANGKARTSVLLACYLRFEGEESTALEAYRRVWAKRDPEQKPEQVIL 208
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BLAST of mRNA_H-elongata_contig77250.15400.1 vs. uniprot
Match: A0A7R9U6K4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6K4_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 5.430e-6
Identity = 24/53 (45.28%), Postives = 34/53 (64.15%), Query Frame = 0 
Query:    8 AKQGWLELNPSNMAAVFCANGKARTSVLLACFLRFEGEESSALEAYRRVCAKR 60
            A + W +L   ++A V C NGK RTS+LLAC+LR+ GE+SS  E +     +R
Sbjct:   27 AIKAWCDLGMDHLAIVCCENGKTRTSLLLACYLRYCGEKSSVAEGFNAFYMRR 79
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77250.15400.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LT96_ECTSI2.330e-2582.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JR06_9PHAE3.220e-2582.26FMN protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7R9U6K4_9STRA5.430e-645.28Hypothetical protein (Fragment) n=2 Tax=Pinguiococ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029021Protein-tyrosine phosphatase-likeGENE3D3.90.190.10coord: 2..70
e-value: 2.3E-11
score: 45.8
IPR029021Protein-tyrosine phosphatase-likeSUPERFAMILY52799(Phosphotyrosine protein) phosphatases IIcoord: 10..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77250contigH-elongata_contig77250:2061..2276 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77250.15400.1mRNA_H-elongata_contig77250.15400.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig77250 2061..2276 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig77250.15400.1 ID=prot_H-elongata_contig77250.15400.1|Name=mRNA_H-elongata_contig77250.15400.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
MRHFTYTAKQGWLELNPSNMAAVFCANGKARTSVLLACFLRFEGEESSAL
EAYRRVCAKRDPTQEPEQASL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029021Prot-tyrosine_phosphatase-like