prot_H-elongata_contig7724.15396.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7724.15396.1
Unique Nameprot_H-elongata_contig7724.15396.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length436
Homology
BLAST of mRNA_H-elongata_contig7724.15396.1 vs. uniprot
Match: A0A6H5L8H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H6_9PHAE)

HSP 1 Score: 592 bits (1526), Expect = 9.680e-195
Identity = 288/451 (63.86%), Postives = 336/451 (74.50%), Query Frame = 0
Query:    2 GYLSISELQAYELSFLPLSKAMRSSPMPPREEWDPIHAEQSLTAAFAGTAVRGQWTLRLRDTTTEGAKNGIGRAATSHAHGDGGFAGWELVLTDFFGNVLRFTADSFITVETLPKYGKLVA-ASSRTEAVAAVAAT--------------EPSSTGVVIATAAGFERHLGLCRTMGSVDSGDPSQRCPSVFGVGPRLSTRVLGAVPVRNQVEIVPGGGAKLWYLPEEGYLGPDDFSFSVTVESVKSTEAWVVGMHTRRCRLFEKGEAHSLCACSSPMVEVKASQQALCYAAVEDVCESMLTGLGGNKTDANTRLNSRIKIRMCKACGVTFERQVTGIPSAFAEYTSECLAEVAKVSDWLVVEGYCEETYAIPLCDNEAFDPIGTPIEGPDLGVARPITLASLGSRQTDQTDFRR-----TVTSARGYTECLCTQAPEACACRDNVWASRHR 432
            GYLSISELQAYELSFLP SK+ RS+P+P REEWDPIHAE+SLTAAF GT V GQWTLRLRDTT      GIGRAA  HAHGDGG AGWELV+TDFFGNV RFT DS +TVETLPKYG+L A AS+  EA+ A + T              + +ST   I  A GF+RHLG C  +G  D GD S+ CP +FG GP LSTR LGAV  RN+V+  PGGGAK WYLPEEGYLGPDDF FSVTV  VKS +AWVVG+HTRRCRLFE+G+AH LC C SP+++V   QQALCY+AVE VC S L+GLGGNKTD+NTRLN++IK+RMCKAC +T+  QVT  P  F+EYTSECLAE+ K+ DWLV EGYC++TY  P+CDNEAFDP+G PIEGP LG AR + L  LG++QTD+TD RR     +        +C CTQAPE C CRD  WA+R +
Sbjct: 1160 GYLSISELQAYELSFLPFSKSTRSNPVPVREEWDPIHAEESLTAAFMGTTVSGQWTLRLRDTTAMEVGTGIGRAANRHAHGDGGVAGWELVVTDFFGNVFRFTTDSVVTVETLPKYGRLFAGASNAAEALTAASTTTXXVTINXXXXXNYQETSTAYQITAADGFDRHLGTCHAVGGGDRGDRSRNCPDMFGSGPSLSTRSLGAVAARNRVQAAPGGGAKFWYLPEEGYLGPDDFGFSVTVAGVKSEDAWVVGVHTRRCRLFEEGDAHDLCLCKSPVIQVDQDQQALCYSAVESVCASELSGLGGNKTDSNTRLNTKIKVRMCKACDITYRGQVTSTPETFSEYTSECLAEIGKIGDWLVTEGYCQDTYTFPVCDNEAFDPVGNPIEGPSLGAARSLRLEGLGTKQTDRTDIRRRSGSGSADDGEDSRKCRCTQAPEGCPCRDQAWATRDQ 1610          
BLAST of mRNA_H-elongata_contig7724.15396.1 vs. uniprot
Match: D7G8I0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8I0_ECTSI)

HSP 1 Score: 598 bits (1541), Expect = 2.040e-192
Identity = 294/451 (65.19%), Postives = 338/451 (74.94%), Query Frame = 0
Query:    2 GYLSISELQAYELSFLPLSKAMRSSPMPPREEWDPIHAEQSLTAAFAGTAVRGQWTLRLRDTTTEGAKNGIGRAATSHAHGDGGFAGWELVLTDFFGNVLRFTADSFITVETLPKYGKLVA-ASSRTEAVAAVAAT--------------EPSSTGVVIATAAGFERHLGLCRTMGSVDSGDPSQRCPSVFGVGPRLSTRVLGAVPVRNQVEIVPGGGAKLWYLPEEGYLGPDDFSFSVTVESVKSTEAWVVGMHTRRCRLFEKGEAHSLCACSSPMVEVKASQQALCYAAVEDVCESMLTGLGGNKTDANTRLNSRIKIRMCKACGVTFERQVTGIPSAFAEYTSECLAEVAKVSDWLVVEGYCEETYAIPLCDNEAFDPIGTPIEGPDLGVARPITLASLGSRQTDQTDFRR-----TVTSARGYTECLCTQAPEACACRDNVWASRHR 432
            GYLSISELQAYELSFLPLSK  RS+P+P REEWDPIHAE+SLTAAF GT V GQWTLRLRDTT      GIGRAA  HAHGDGG AGWELV+TDFFGNV RFT DS +TVETLPKYG+L A AS+  EA+ A + T              + +ST   I  A GF+RHLG C  +G  D GD S+ CP +FG GP LSTR LGAV  RN+V+  PGGGAKLWYLPEEGYLGPDDF FSVTV  VKS +AWVVG+HTRRCRLFE+G+AH LC C SP+++V   QQALCY+AVE VC S L+GLGGNKTD+NTRLN++IK+RMCKAC VT+  QVT  P  F+EYTSECLAE+ KV DWLV EGYC++TY  P+CDNEAFDP+G PIEGP LGVAR + L  LG++QTD+TD RR     +        EC CTQAPE C CRD  WA+R +
Sbjct: 1853 GYLSISELQAYELSFLPLSKPTRSNPVPVREEWDPIHAEESLTAAFMGTTVSGQWTLRLRDTTAMAVGTGIGRAANRHAHGDGGVAGWELVVTDFFGNVFRFTTDSVVTVETLPKYGRLFAGASNAAEALTAASTTTXXXXXXXXXXTNYQETSTAYHITAADGFDRHLGACHAVGGGDRGDRSRNCPDMFGSGPSLSTRSLGAVAARNRVQAAPGGGAKLWYLPEEGYLGPDDFGFSVTVAGVKSEDAWVVGVHTRRCRLFEEGDAHDLCLCESPVIQVDQDQQALCYSAVESVCASELSGLGGNKTDSNTRLNTKIKVRMCKACDVTYRGQVTSTPETFSEYTSECLAEIGKVGDWLVAEGYCQDTYTFPVCDNEAFDPVGNPIEGPSLGVARSLRLEGLGTKQTDRTDIRRRSGSGSADGGEDGGECRCTQAPEGCPCRDQAWATRDQ 2303          
BLAST of mRNA_H-elongata_contig7724.15396.1 vs. uniprot
Match: A0A836C7I5_9STRA (TFIID_20kDa domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7I5_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 5.720e-10
Identity = 54/196 (27.55%), Postives = 84/196 (42.86%), Query Frame = 0
Query:  224 SVTVESVKSTEAWVVGMHTRRCRLFEKGEAHSLCACSSPMVEVKASQQALCYAAVEDVCESMLTGLGGNKTDANTRLNS-RIKIRMCKACGVTFERQVTGIPSAFAEYTSECLAEVAKVSDWLVVEGYCEETYAIPLCDNEAFDPIGTPIEGPDLGVARPITLASLGSRQTDQTDFRRTVTSARGYTECLCTQAPE 418
            S TV+  KS  A  V +  R+CRL E G+   LCAC++P                                DA + L   ++  R C++C        T  P+++ ++ +ECL E+AKV+ ++  +GYC +TY +PLC  EA D +     G +  +A    ++      T  T      TS  G  E +   A E
Sbjct: 3882 SSTVDGKKSPAAAPVNVKVRQCRLHETGQRQPLCACTAP-------------------------------ADAQSMLECFQVSARACQSCSSPL---ATFSPASYRDFNAECLLELAKVTAYMRQQGYCADTYELPLCRGEAADKLVGASIGLEPAIASVHFVSHCCCSHTRSTHRTAPPTSQTGVQELMLEVADE 4043          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7724.15396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L8H6_9PHAE9.680e-19563.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8I0_ECTSI2.040e-19265.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C7I5_9STRA5.720e-1027.55TFIID_20kDa domain-containing protein n=1 Tax=Trib... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7724contigH-elongata_contig7724:312..2996 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7724.15396.1mRNA_H-elongata_contig7724.15396.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7724 2..3159 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7724.15396.1 ID=prot_H-elongata_contig7724.15396.1|Name=mRNA_H-elongata_contig7724.15396.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=436bp
MGYLSISELQAYELSFLPLSKAMRSSPMPPREEWDPIHAEQSLTAAFAGT
AVRGQWTLRLRDTTTEGAKNGIGRAATSHAHGDGGFAGWELVLTDFFGNV
LRFTADSFITVETLPKYGKLVAASSRTEAVAAVAATEPSSTGVVIATAAG
FERHLGLCRTMGSVDSGDPSQRCPSVFGVGPRLSTRVLGAVPVRNQVEIV
PGGGAKLWYLPEEGYLGPDDFSFSVTVESVKSTEAWVVGMHTRRCRLFEK
GEAHSLCACSSPMVEVKASQQALCYAAVEDVCESMLTGLGGNKTDANTRL
NSRIKIRMCKACGVTFERQVTGIPSAFAEYTSECLAEVAKVSDWLVVEGY
CEETYAIPLCDNEAFDPIGTPIEGPDLGVARPITLASLGSRQTDQTDFRR
TVTSARGYTECLCTQAPEACACRDNVWASRHRPGV*
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