mRNA_H-elongata_contig77202.15394.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig77202.15394.1 vs. uniprot
Match: D8LQH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH8_ECTSI) HSP 1 Score: 192 bits (487), Expect = 2.490e-54 Identity = 93/112 (83.04%), Postives = 102/112 (91.07%), Query Frame = 1
Query: 4 RPALHSLWARMLLELRSLAVDFRPELRNCALNTLFSAAIRNGSRLSEEEWKQFMLEVTFPLMGQVLESTNSASRGANTAVAPELKKGVRMMMHHTRDTDQKQWNETRVLAMQ 339
RP+L SLW ML +LRSL+VDFRPELRNCA+NTLFSAA+ NG LSE +WKQF+ EVTFPL+ QVLESTNSASRGANTAVAPELKKGVRM+MHHTRDTDQKQWNETRVLAMQ
Sbjct: 1384 RPSLRSLWPTMLFQLRSLSVDFRPELRNCAVNTLFSAAVGNGDGLSESDWKQFLQEVTFPLIEQVLESTNSASRGANTAVAPELKKGVRMLMHHTRDTDQKQWNETRVLAMQ 1495
BLAST of mRNA_H-elongata_contig77202.15394.1 vs. uniprot
Match: A0A6H5KPX0_9PHAE (Mon2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX0_9PHAE) HSP 1 Score: 190 bits (482), Expect = 1.160e-53 Identity = 92/112 (82.14%), Postives = 101/112 (90.18%), Query Frame = 1
Query: 4 RPALHSLWARMLLELRSLAVDFRPELRNCALNTLFSAAIRNGSRLSEEEWKQFMLEVTFPLMGQVLESTNSASRGANTAVAPELKKGVRMMMHHTRDTDQKQWNETRVLAMQ 339
RP+L SLW ML +LRSL+VDFRPELRNCA+NTLFSAA+ NG LSE +WKQF+ EVTFPL+ QVLESTNSASRGANTAVAPELKKGVRM+MHHTRDTDQKQWNETRVL MQ
Sbjct: 457 RPSLRSLWPTMLFQLRSLSVDFRPELRNCAVNTLFSAAVGNGDGLSESDWKQFLQEVTFPLIEQVLESTNSASRGANTAVAPELKKGVRMLMHHTRDTDQKQWNETRVLMMQ 568
BLAST of mRNA_H-elongata_contig77202.15394.1 vs. uniprot
Match: A0A835YQS4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS4_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.520e-36 Identity = 68/106 (64.15%), Postives = 87/106 (82.08%), Query Frame = 1
Query: 22 LWARMLLELRSLAVDFRPELRNCALNTLFSAAIRNGSRLSEEEWKQFMLEVTFPLMGQVLESTNSASRGANTAVAPELKKGVRMMMHHTRDTDQKQWNETRVLAMQ 339
+W+ ML EL LA D RPE+RNCA+NTLFSA I NGS S+++W+Q++LEVTFPL+G+VL T +AS +T VAPEL+KGVR +MHH+RDTD+KQW+ET VLAMQ
Sbjct: 1169 MWSAMLTELSHLAKDQRPEVRNCAINTLFSALIGNGSTFSDQQWQQYLLEVTFPLLGEVLCCTRAASH--DTGVAPELRKGVRAVMHHSRDTDRKQWSETSVLAMQ 1272
BLAST of mRNA_H-elongata_contig77202.15394.1 vs. uniprot
Match: L8H3Z7_ACACA (Protein MON2 homolog n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H3Z7_ACACA) HSP 1 Score: 96.7 bits (239), Expect = 6.670e-21 Identity = 51/120 (42.50%), Postives = 73/120 (60.83%), Query Frame = 1
Query: 1 DRPALHSLWARMLLELRSLAVDFRPELRNCALNTLFSAAIRNGSRLSEEEWKQFMLEVTFPLMGQVLESTNSASRGA-NTAVAPELKKGVRMMMHHTRDTDQKQWNETRVLAMQ--VQVL 351
D + LW EL+ L VD R E+RNCA+ TLF +GS L + W + ++ FPLM ++ + SA + +T + E K V MM+HHTR+T++KQWNET+VLA+Q VQV+
Sbjct: 1091 DSTTSNKLWLSTYHELKQLCVDARTEVRNCAIQTLFKTLSTHGSLLEHDIWPSVIAQILFPLMNEIRNLSASAGKNRIDTELGKEGGKSVIMMVHHTRNTEEKQWNETQVLALQGIVQVM 1210
BLAST of mRNA_H-elongata_contig77202.15394.1 vs. uniprot
Match: A0A4V1SL55_9BACT (Mon2_C domain-containing protein (Fragment) n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4V1SL55_9BACT) HSP 1 Score: 92.4 bits (228), Expect = 1.650e-19 Identity = 47/109 (43.12%), Postives = 68/109 (62.39%), Query Frame = 1
Query: 10 ALHSLWARMLLELRSLAVDFRPELRNCALNTLFSAAIRNGSRLSEEEWKQFMLEVTFPLMGQVLESTNSASRGANTAVAPELKKGVRMMMHHTRDTDQKQWNETRVLAM 336
A HSL M L L++D RPE+R+CA++TLFSA N +++S W + + PL + + A + AVAPELK+G++M +HH+RDT KQW+ETRVL +
Sbjct: 156 AAHSLIEVMFRRLYQLSLDSRPEIRHCAVSTLFSALAGNAAQMSGPLWSRCFDAIVAPLFAKCAARSQLALKINEQAVAPELKRGMKMAVHHSRDTAAKQWSETRVLIL 264
BLAST of mRNA_H-elongata_contig77202.15394.1 vs. uniprot
Match: A0A163MP22_ABSGL (Uncharacterized protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A163MP22_ABSGL) HSP 1 Score: 84.3 bits (207), Expect = 1.390e-16 Identity = 41/111 (36.94%), Postives = 67/111 (60.36%), Query Frame = 1
Query: 13 LHSLWARMLLELRSLAVDFRPELRNCALNTLFSAAIRNGSRLSEEEWKQFMLEVTFPLMGQVLESTNSASRGANTAVAPEL---KKGVRMMMHHTRDTDQKQWNETRVLAM 336
L++LW +LL+L + VD RPE+RN A+ TLF + NG+ L W+ + +V FPL+ + ++ +A+ A +P ++ M+HH+RDT KQW+ET+VL +
Sbjct: 1074 LNTLWMLLLLQLSKVCVDARPEVRNGAIQTLFRTIMMNGNVLGSNLWQACIWQVLFPLLDAIKAASKAAAATGEAASSPSSGNEREASGFMLHHSRDTADKQWDETKVLVL 1184
BLAST of mRNA_H-elongata_contig77202.15394.1 vs. uniprot
Match: A0A2V3J1Q5_9FLOR (Protein MON2-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Q5_9FLOR) HSP 1 Score: 83.2 bits (204), Expect = 3.510e-16 Identity = 40/105 (38.10%), Postives = 65/105 (61.90%), Query Frame = 1
Query: 22 LWARMLLELRSLAVDFRPELRNCALNTLFSAAIRNGSRLSEEEWKQFMLEVTFPLMGQVLESTNSASRGANTAVAPELKKGVRMMMHHTRDTDQKQWNETRVLAM 336
LW +L L+ +++D RPE+RN A+ TL A + SRLS W + + + PL+ +V++ N + G + + V++++HH+RDT +KQWNETRVLA+
Sbjct: 921 LWVSLLQVLKEVSMDDRPEVRNSAVKTLTGALSAHSSRLSAIAWNRCVAKALLPLLEEVMQGGNG-NPGEEAPTLSKSRSDVQLLLHHSRDTPRKQWNETRVLAL 1024
BLAST of mRNA_H-elongata_contig77202.15394.1 vs. uniprot
Match: R7QQH4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQH4_CHOCR) HSP 1 Score: 83.2 bits (204), Expect = 3.520e-16 Identity = 38/105 (36.19%), Postives = 63/105 (60.00%), Query Frame = 1
Query: 22 LWARMLLELRSLAVDFRPELRNCALNTLFSAAIRNGSRLSEEEWKQFMLEVTFPLMGQVLESTNSASRGANTAVAPELKKGVRMMMHHTRDTDQKQWNETRVLAM 336
LW ++ L+ ++ D RPE+RNCA+ TL + +G +LS WK + PL+ +V+ S+ + + + V++++HH+RDT +KQWNETRVLA+
Sbjct: 984 LWIQLFETLKGISTDDRPEIRNCAVKTLTGSLSTHGLQLSAMAWKGCVAHALLPLLEEVMRGRAHTSQSDEISSLGKSRGDVQLLLHHSRDTPRKQWNETRVLAL 1088
BLAST of mRNA_H-elongata_contig77202.15394.1 vs. uniprot
Match: A0A7S4Q613_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q613_9DINO) HSP 1 Score: 80.5 bits (197), Expect = 3.690e-16 Identity = 36/109 (33.03%), Postives = 68/109 (62.39%), Query Frame = 1
Query: 13 LHSLWARMLLELRSLAVDFRPELRNCALNTLFSAAIRNGSRLSEEEWKQFMLEVTFPLMGQVLESTNSASRGANTAVAPELKKGVRMMMHHTRDTDQKQWNETRVLAMQ 339
+ LW ++ + LR+LAVD RPE+RNCA+ +L SA + +G ++ +++ + ++ ++ ++ E+ A G V E + +++HH+RDT +KQW+ET VL ++
Sbjct: 77 VEELWVQIFMHLRALAVDARPEVRNCAVKSLTSALLSHGRKVGTACYRRCLQDILIEVLAEIQEAAQRARNGEGPGV--ERTRSESLIVHHSRDTPEKQWDETMVLGVE 183
BLAST of mRNA_H-elongata_contig77202.15394.1 vs. uniprot
Match: A0A2P6V8U0_9CHLO (Protein MON2 homolog n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V8U0_9CHLO) HSP 1 Score: 81.6 bits (200), Expect = 1.220e-15 Identity = 39/103 (37.86%), Postives = 65/103 (63.11%), Query Frame = 1
Query: 34 MLLELRSLAVDFRPELRNCALNTLFSAAIRNGSRLSEEEWKQFMLEVTFPLM--GQVLESTNSASRGANTAVAPELKKGVRMMMHHTRDTDQKQWNETRVLAM 336
+ L L++++ D RPE+RN + TLF+ + G RLS W+Q + E+ FPL+ ++ +T S + + K VRMM+HH+R+++QKQW+ET V+A+
Sbjct: 995 IFLALQAVSQDARPEIRNSGVRTLFAVVVNQGPRLSRALWEQCLWEMLFPLLRHAYLMSATASRDEAESMLLGQSRGKEVRMMVHHSRNSEQKQWDETVVIAL 1097 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77202.15394.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig77202.15394.1 >prot_H-elongata_contig77202.15394.1 ID=prot_H-elongata_contig77202.15394.1|Name=mRNA_H-elongata_contig77202.15394.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=118bp DRPALHSLWARMLLELRSLAVDFRPELRNCALNTLFSAAIRNGSRLSEEEback to top mRNA from alignment at H-elongata_contig77202:742..1817- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig77202.15394.1 ID=mRNA_H-elongata_contig77202.15394.1|Name=mRNA_H-elongata_contig77202.15394.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1076bp|location=Sequence derived from alignment at H-elongata_contig77202:742..1817- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig77202:742..1817- >mRNA_H-elongata_contig77202.15394.1 ID=mRNA_H-elongata_contig77202.15394.1|Name=mRNA_H-elongata_contig77202.15394.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=708bp|location=Sequence derived from alignment at H-elongata_contig77202:742..1817- (Himanthalia elongata Himel1 dioecious)back to top |