mRNA_H-elongata_contig77142.15388.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig77142.15388.1 vs. uniprot
Match: D8LJA4_ECTSI (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJA4_ECTSI) HSP 1 Score: 429 bits (1103), Expect = 1.160e-145 Identity = 230/378 (60.85%), Postives = 267/378 (70.63%), Query Frame = 1
Query: 1 VERQPTARPPALHPYTPQLRILSWNVNGIRAQVAKKKGRKALQQLVEKEQPHVLGLQEIRIKAVATDTTQDGRVRASTD----TYFVEVVQSLLPDYDTFWLSSFPPARIGYSGTALFIRRRGDCDIGCPRLLRVRGGMGNSITTDGDLEGRVTTVEYDVMFVVNVYTPNSGAELKRLSFRTCKWDQVFAAYVRGLEKVKPVVVIGDMNVAHEDKDLYNPKEKRMRQAAGTTPEERISFAEKLLGRDPPPSCRIMTEADSSEQRRGMD---------------------GHKRGPALVDTFRERYPDVHGVFSYWSTRARNRPMNRGMRLDYCLASRSLVDGPHGFLHDAFVLDAETVDVSDHCPVGVVLRLGDHFVE 1059
VERQ T RP LHPYTPQLR+LSWNVNGIRAQ+ K++GRKALQ ++ +E+PHVLGLQEIR A T +T G+ R + F ++V+++LPDYDT WLSS PPAR GY+GTALF+R++ DIGCP+LL VRGG+G+ +GDLEGRVTT E DV FVVNVYTPN+GA LKRL FRT WDQ FAAYVR LEK+KPVVV+GDMNVAHED D YNP++KR R+AAGTTPEER SFA LLG P G +LVDTFRE++P V GVFSYWS RARNRP+NRGMRLDYCLASR LV G +HDAFVLD +TV VSDHCPVGVVLRLGDH+ E
Sbjct: 109 VERQTTTRPRPLHPYTPQLRVLSWNVNGIRAQMDKEEGRKALQGIIAQERPHVLGLQEIRTSA--TTSTPPGKTRRKKTPPQTSNFADIVKTILPDYDTIWLSSVPPARQGYAGTALFVRKKRSWDIGCPKLLGVRGGIGHP---EGDLEGRVTTAELDVAFVVNVYTPNAGAGLKRLDFRTKDWDQAFAAYVRDLEKIKPVVVVGDMNVAHEDVDFYNPEQKRTRKAAGTTPEERSSFAVNLLGCHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKAEGSGCSLVDTFREKHPKVTGVFSYWSVRARNRPVNRGMRLDYCLASRGLVGGDG--VHDAFVLDRDTVGVSDHCPVGVVLRLGDHYPE 479
BLAST of mRNA_H-elongata_contig77142.15388.1 vs. uniprot
Match: UPI001FB0E5BA (DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0E5BA) HSP 1 Score: 192 bits (487), Expect = 4.650e-53 Identity = 131/343 (38.19%), Postives = 187/343 (54.52%), Query Frame = 1
Query: 16 TARPPALHPYTPQLRILSWNVNGIRAQVAKKKGRKALQQLVEKEQPHVLGLQEIRIKAVATDTTQDGRVRASTDTYFVEVVQSLLPDYD-TFWLSSFPPARIGYSGTALFIRRRGDCDIGCPRLLRVRGGMGNSITTDGDLEGRVTTVEYDVMFVVNVYTPNSGAELKRLSFRTCKWDQVFAAYVRGLEKVKPVVVIGDMNVAHEDKDLYNPKEKRMRQAAGTTPEERISFAEKLLGRDPPPSCRIMTEADSSEQRRGMDGHKRGPALVDTFRERYPDVHGVFSYWSTRARNRPMNRGMRLDYCLASRSLVDGPHGFLHDAFVLDAETVDVSDHCPVGVVLRL 1041
T RP L T ++++SWNVNG+RA + K K A Q+L ++E VL LQE +++ ++ + +SLL Y+ +FW S +++GYSGTA+ R + L R G+G TTD D EGR+ TVE++ +++N Y PNSG LKRLS+RT +WD + Y++ LEK KPVV+ GD+N AHE+ D+YNP + ++AG T EER SF L + VDTFR+++P V G +SYW R R NRG RLDY L S+S+ D +HD+++L V SDHCP+G+VL+L
Sbjct: 235 TMRPLPLRTDTKSIKLMSWNVNGLRA-LLKLKSFSA-QELAKREDIDVLCLQETKLQEKDVES----------------IKESLLEGYENSFWTCSV--SKLGYSGTAIISRLK---------PLSTRYGLG---TTDHDSEGRLVTVEFETFYLLNAYVPNSGDGLKRLSYRTTQWDLSLSNYMKELEKSKPVVLTGDLNCAHEEIDIYNPDGNK--KSAGFTDEERQSFQLNFLSK----------------------------GFVDTFRKQHPGVVG-YSYWGYRHGGRKTNRGWRLDYFLVSKSIADQ----VHDSYILP--DVTGSDHCPIGLVLKL 508
BLAST of mRNA_H-elongata_contig77142.15388.1 vs. uniprot
Match: A0A6J1DIY8_MOMCH (DNA-(apurinic or apyrimidinic site) endonuclease n=8 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1DIY8_MOMCH) HSP 1 Score: 192 bits (488), Expect = 4.820e-53 Identity = 134/350 (38.29%), Postives = 192/350 (54.86%), Query Frame = 1
Query: 16 TARPPALHPYTPQLRILSWNVNGIRAQVAKKKGRKALQQLVEKEQPHVLGLQEIRIKAVATDTTQDGRVRAS-------TDTYFVEVVQSLLPDYD-TFWLSSFPPARIGYSGTALFIRRRGDCDIGCPRLLRVRGGMGNSITTDGDLEGRVTTVEYDVMFVVNVYTPNSGAELKRLSFRTCKWDQVFAAYVRGLEKVKPVVVIGDMNVAHEDKDLYNPKEKRMRQAAGTTPEERISFAEKLLGRDPPPSCRIMTEADSSEQRRGMDGHKRGPALVDTFRERYPDVHGVFSYWSTRARNRPMNRGMRLDYCLASRSLVDGPHGFLHDAFVLDAETVDVSDHCPVGVVLRL 1041
T RP L T L+ILSWNVNG+RA + K G AL L E+E +L LQE +++ + GR R+S T+ +E+ +SL+ Y T+W S +++GYSGTA+ R + L VR G+G S + D EGR+ E+D F+++VY PNSG LKRLS+R +WD + Y++ LEK+KPV++ GD+N AH++ D+YNP R ++AG T EER SF L + VDTFR+++P+V G ++YW R R NRG RLDY L S S+ + +HD+++L V SDHCP+G+VL+L
Sbjct: 231 TMRPSPLSKDTKSLKILSWNVNGLRA-LLKLGGFSALG-LAEREAFDILCLQETKLQPASRSERVGGRQRSSLGDGGFYTEKDILEIKKSLMDGYHHTYWTCSV--SKLGYSGTAIISRIQ---------PLSVRYGVGIS---EHDGEGRLVVAEFDSFFLLSVYVPNSGDGLKRLSYRITQWDLSLSKYIKELEKLKPVILSGDLNCAHQEIDIYNPAGNR--RSAGFTDEERKSFETNFLEK----------------------------GFVDTFRQQHPNVVG-YTYWGYRHGGRKTNRGWRLDYFLVSDSIAEK----VHDSYILP--DVGGSDHCPIGLVLKL 527
BLAST of mRNA_H-elongata_contig77142.15388.1 vs. uniprot
Match: A0A078HC93_BRANA (DNA-(apurinic or apyrimidinic site) endonuclease n=4 Tax=Brassica TaxID=3705 RepID=A0A078HC93_BRANA) HSP 1 Score: 191 bits (484), Expect = 2.720e-52 Identity = 129/343 (37.61%), Postives = 189/343 (55.10%), Query Frame = 1
Query: 16 TARPPALHPYTPQLRILSWNVNGIRAQVAKKKGRKALQQLVEKEQPHVLGLQEIRIKAVATDTTQDGRVRASTDTYFVEVVQSLLPDYD-TFWLSSFPPARIGYSGTALFIRRRGDCDIGCPRLLRVRGGMGNSITTDGDLEGRVTTVEYDVMFVVNVYTPNSGAELKRLSFRTCKWDQVFAAYVRGLEKVKPVVVIGDMNVAHEDKDLYNPKEKRMRQAAGTTPEERISFAEKLLGRDPPPSCRIMTEADSSEQRRGMDGHKRGPALVDTFRERYPDVHGVFSYWSTRARNRPMNRGMRLDYCLASRSLVDGPHGFLHDAFVLDAETVDVSDHCPVGVVLRL 1041
T RPP L T ++I++WNVNG+RA + K + ALQ L ++E VL LQE +I+ + EV ++L YD +FW S +++GYSGTA+ R + L VR G G S +D D+EGR+ T E+D +++++ Y PNSG LKRLS+R +WD+ + Y++ LEK KPVV+ GD+N AHE+ D+YNP + ++AG T EER SF E L + LVDTFR+++P V G ++YW R R N+G RLDY L S S+ +HD+++L ++ SDHCP+G++L+L
Sbjct: 273 TMRPPPLPEGTKSVKIMTWNVNGLRA-LLKLESFSALQ-LAQRENFDVLCLQETKIQVKDVE----------------EVKKALSDGYDHSFWSCSV--SKLGYSGTAIISRIK---------PLSVRYGTGLS-GSDHDIEGRIVTTEFDSLYLISTYVPNSGDGLKRLSYRIEEWDRTLSKYIKELEKTKPVVLTGDLNCAHEEIDIYNPAGNK--RSAGFTIEERQSFRENFLDK----------------------------GLVDTFRKQHPGVVG-YTYWGYRHGTRKTNKGWRLDYFLVSESIAAN----VHDSYILP--DINGSDHCPIGLILKL 548
BLAST of mRNA_H-elongata_contig77142.15388.1 vs. uniprot
Match: A0A5J4ZKI9_9ASTE (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J4ZKI9_9ASTE) HSP 1 Score: 189 bits (480), Expect = 9.610e-52 Identity = 137/343 (39.94%), Postives = 186/343 (54.23%), Query Frame = 1
Query: 16 TARPPALHPYTPQLRILSWNVNGIRAQVAKKKGRKALQQLVEKEQPHVLGLQEIRIKAVATDTTQDGRVRASTDTYFVEVVQSLLPDYD-TFWLSSFPPARIGYSGTALFIRRRGDCDIGCPRLLRVRGGMGNSITTDGDLEGRVTTVEYDVMFVVNVYTPNSGAELKRLSFRTCKWDQVFAAYVRGLEKVKPVVVIGDMNVAHEDKDLYNPKEKRMRQAAGTTPEERISFAEKLLGRDPPPSCRIMTEADSSEQRRGMDGHKRGPALVDTFRERYPDVHGVFSYWSTRARNRPMNRGMRLDYCLASRSLVDGPHGFLHDAFVLDAETVDVSDHCPVGVVLRL 1041
T RPP L T ++I+SWNVNG+RA + K +G ALQ L ++E VL LQE ++ Q+ V A V Q LL Y+ +FW S +++GYSGTA+ R + L VR G+G S D D EGR+ TVE+D F+++ Y PNSG LKRLS+R +WD + Y++ LEK KPV++ GD+N AHE+ D+YNP + ++AG T EER SF L R VDTFR ++P V G ++YW R R NRG RLDY L S S+ D +HD+++L V SDHCP+G++LRL
Sbjct: 271 TMRPPPLTGDTKFMKIMSWNVNGLRA-LLKLEGFSALQ-LAQREDFDVLCLQETKL--------QEKDVEA--------VKQCLLEGYENSFWTCSV--SKLGYSGTAIVSRIK---------PLSVRYGLGIS---DHDNEGRLVTVEFDKYFLISGYVPNSGDGLKRLSYRITQWDLSLSDYMKELEKSKPVILTGDLNCAHEEIDIYNPAGNK--RSAGFTDEERQSFETNFLFR----------------------------GFVDTFRRQHPGVVG-YTYWGYRHGGRKTNRGWRLDYFLVSESIADR----VHDSYILP--DVSGSDHCPIGLILRL 544
BLAST of mRNA_H-elongata_contig77142.15388.1 vs. uniprot
Match: UPI0019011401 (DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X1 n=3 Tax=Benincasa hispida TaxID=102211 RepID=UPI0019011401) HSP 1 Score: 187 bits (474), Expect = 2.700e-51 Identity = 127/341 (37.24%), Postives = 188/341 (55.13%), Query Frame = 1
Query: 22 RPPALHPYTPQLRILSWNVNGIRAQVAKKKGRKALQQLVEKEQPHVLGLQEIRIKAVATDTTQDGRVRASTDTYFVEVVQSLLPDYD-TFWLSSFPPARIGYSGTALFIRRRGDCDIGCPRLLRVRGGMGNSITTDGDLEGRVTTVEYDVMFVVNVYTPNSGAELKRLSFRTCKWDQVFAAYVRGLEKVKPVVVIGDMNVAHEDKDLYNPKEKRMRQAAGTTPEERISFAEKLLGRDPPPSCRIMTEADSSEQRRGMDGHKRGPALVDTFRERYPDVHGVFSYWSTRARNRPMNRGMRLDYCLASRSLVDGPHGFLHDAFVLDAETVDVSDHCPVGVVLRL 1041
RP L T ++ILSWNVNG+RA + KG A++ L E+E +L LQE +++ + +++ +SL+ Y T+W S +++GYSGTA+ R + + VR G+G S + D EGRV TVE+D F++NVY PNSG LKRLS+R +WD + Y++ LEK+KPV++ GD+N AH++ D+YNP R ++AG T EER SFA L + VDTFR+++PD+ G ++YW R R N+G RLDY L S ++ + +HD+++L V SDHCP+G+VL+L
Sbjct: 224 RPTPLSKDTKSVKILSWNVNGLRALL---KGFSAVE-LAEREDFDILCLQETKLQ----------------EKDILDIKKSLVDGYHYTYWTCSV--SKLGYSGTAIISRIQ---------PISVRYGVGIS---EHDGEGRVVTVEFDSFFLLNVYVPNSGDGLKRLSYRIAQWDPSLSNYMKELEKLKPVILTGDLNCAHQEIDIYNPAGNR--KSAGFTNEERQSFATNFLEK----------------------------GFVDTFRQKHPDIIG-YTYWGYRHGGRKTNKGWRLDYFLVSETMAEK----VHDSYILP--DVGGSDHCPIGLVLKL 493
BLAST of mRNA_H-elongata_contig77142.15388.1 vs. uniprot
Match: A0A2J6KKF4_LACSA (DNA-(apurinic or apyrimidinic site) endonuclease n=12 Tax=Lactuca TaxID=4235 RepID=A0A2J6KKF4_LACSA) HSP 1 Score: 186 bits (473), Expect = 6.150e-51 Identity = 134/343 (39.07%), Postives = 190/343 (55.39%), Query Frame = 1
Query: 16 TARPPALHPYTPQLRILSWNVNGIRAQVAKKKGRKALQQLVEKEQPHVLGLQEIRIKAVATDTTQDGRVRASTDTYFVEVVQSLLPDYD-TFWLSSFPPARIGYSGTALFIRRRGDCDIGCPRLLRVRGGMGNSITTDGDLEGRVTTVEYDVMFVVNVYTPNSGAELKRLSFRTCKWDQVFAAYVRGLEKVKPVVVIGDMNVAHEDKDLYNPKEKRMRQAAGTTPEERISFAEKLLGRDPPPSCRIMTEADSSEQRRGMDGHKRGPALVDTFRERYPDVHGVFSYWSTRARNRPMNRGMRLDYCLASRSLVDGPHGFLHDAFVLDAETVDVSDHCPVGVVLRL 1041
T RPP L ++++SWNVNG+RA + K + AL+ L ++E VL LQE ++ Q+ V A + Q LL Y+ +FW S +++GYSGTA+ R P + VR G+G S D D EGR+ T E+D ++++ Y PNSG LKRLS+RT +WD + YV+ LEK KPV++ GD+N AH++ D+YNP + ++AG T EER+SF E L K+G VDTFR+++P+V G ++YW R R NRG RLDY L S S+ D +HD+F+L V SDHCP+G+VL+L
Sbjct: 245 TMRPPPLADDAKHVKLMSWNVNGLRA-LLKLESFSALE-LAQREDFDVLCLQETKL--------QEKDVEA--------IKQRLLEGYENSFWTCSV--SKLGYSGTAIISR--------IPPVS-VRYGVGIS---DHDNEGRLVTTEFDSFYLISGYVPNSGDGLKRLSYRTTEWDPTLSNYVKELEKSKPVILTGDLNCAHQEIDIYNPAGNK--RSAGFTIEERMSFEENFL--------------------------KKG--FVDTFRKQHPNVVG-YTYWGFRHGGRKNNRGWRLDYFLVSESIADK----VHDSFILP--DVTGSDHCPIGLVLKL 518
BLAST of mRNA_H-elongata_contig77142.15388.1 vs. uniprot
Match: A0A072VIQ1_MEDTR (DNA-(apurinic or apyrimidinic site) endonuclease n=2 Tax=Medicago truncatula TaxID=3880 RepID=A0A072VIQ1_MEDTR) HSP 1 Score: 186 bits (473), Expect = 9.560e-51 Identity = 130/343 (37.90%), Postives = 184/343 (53.64%), Query Frame = 1
Query: 16 TARPPALHPYTPQLRILSWNVNGIRAQVAKKKGRKALQQLVEKEQPHVLGLQEIRIKAVATDTTQDGRVRASTDTYFVEVVQSLLPDYD-TFWLSSFPPARIGYSGTALFIRRRGDCDIGCPRLLRVRGGMGNSITTDGDLEGRVTTVEYDVMFVVNVYTPNSGAELKRLSFRTCKWDQVFAAYVRGLEKVKPVVVIGDMNVAHEDKDLYNPKEKRMRQAAGTTPEERISFAEKLLGRDPPPSCRIMTEADSSEQRRGMDGHKRGPALVDTFRERYPDVHGVFSYWSTRARNRPMNRGMRLDYCLASRSLVDGPHGFLHDAFVLDAETVDVSDHCPVGVVLRL 1041
T RPP L T +++LSWNVNG+RA + K +G ALQ L ++E VL LQE +++ + E+ Q L+ Y+ +FW S +++GYSGTA+ R + L +R G+G S + D EGR+ TVE+D ++V Y PNSG LKRLS+R +WD + Y++ LEK KPVV+ GD+N AHE+ D+YNP + ++AG T EER SF L VDTFR+++P V G ++YW R R NRG RLDY L S S+ D +HD+++L V SDHCP+G+V++L
Sbjct: 269 TMRPPPLSRNTNFVKLLSWNVNGLRA-LLKLQGFSALQ-LAQREDFDVLCLQETKLQEKDIE----------------EIKQRLIDGYENSFWTCSV--SKLGYSGTAIISRIK---------PLSIRYGLGIS---EHDSEGRLVTVEFDTFYLVTGYVPNSGDGLKRLSYRVTEWDPALSNYLKELEKSKPVVLTGDLNCAHEEIDIYNPAGNK--RSAGFTDEERKSFETNFLSN----------------------------GFVDTFRKQHPGVVG-YTYWGYRHGGRKYNRGWRLDYFLVSESIADK----VHDSYILP--DVIGSDHCPIGLVMKL 542
BLAST of mRNA_H-elongata_contig77142.15388.1 vs. uniprot
Match: A0A5C7IPK1_9ROSI (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7IPK1_9ROSI) HSP 1 Score: 186 bits (473), Expect = 1.400e-50 Identity = 128/343 (37.32%), Postives = 184/343 (53.64%), Query Frame = 1
Query: 16 TARPPALHPYTPQLRILSWNVNGIRAQVAKKKGRKALQQLVEKEQPHVLGLQEIRIKAVATDTTQDGRVRASTDTYFVEVVQSLLPDYDT-FWLSSFPPARIGYSGTALFIRRRGDCDIGCPRLLRVRGGMGNSITTDGDLEGRVTTVEYDVMFVVNVYTPNSGAELKRLSFRTCKWDQVFAAYVRGLEKVKPVVVIGDMNVAHEDKDLYNPKEKRMRQAAGTTPEERISFAEKLLGRDPPPSCRIMTEADSSEQRRGMDGHKRGPALVDTFRERYPDVHGVFSYWSTRARNRPMNRGMRLDYCLASRSLVDGPHGFLHDAFVLDAETVDVSDHCPVGVVLRL 1041
T RPP T +++LSWNVNG+RA + K +G ALQ L ++E VL LQE +++A + + + +SL+ Y++ FW S +++GYSGTA+ R + L V G+G D D EGRV T E+D +++N Y PNSG L+RL +R +WD ++Y++ LEK KPV++ GD+N AH++ D+YNP R ++AG T EER SF L + VDTFR ++PDV G ++YW+ R R NRG RLDY L S S+ D H D+++L V SDHCP+G+VL+L
Sbjct: 287 TMRPPPPSGDTKSMKLLSWNVNGLRA-LLKLEGFSALQ-LAQREDFDVLCLQETKLQASMLEKDVES------------IRESLIDGYESSFWTCSV--SKLGYSGTAIISR---------VKPLSVTYGLG---IADPDSEGRVVTAEFDSFYLINCYVPNSGDGLRRLPYRIAEWDISLSSYMKELEKKKPVILTGDLNCAHQEIDIYNPAGNR--RSAGFTDEERQSFGTNFLSQ----------------------------GFVDTFRAQHPDVVG-YTYWAYRQGARKTNRGWRLDYFLVSGSIADKAH----DSYILP--DVGGSDHCPIGLVLKL 564
BLAST of mRNA_H-elongata_contig77142.15388.1 vs. uniprot
Match: A0A0A0LF64_CUCSA (DNA-(apurinic or apyrimidinic site) endonuclease n=4 Tax=Cucumis sativus TaxID=3659 RepID=A0A0A0LF64_CUCSA) HSP 1 Score: 184 bits (466), Expect = 4.620e-50 Identity = 128/341 (37.54%), Postives = 183/341 (53.67%), Query Frame = 1
Query: 22 RPPALHPYTPQLRILSWNVNGIRAQVAKKKGRKALQQLVEKEQPHVLGLQEIRIKAVATDTTQDGRVRASTDTYFVEVVQSLLPDYD-TFWLSSFPPARIGYSGTALFIRRRGDCDIGCPRLLRVRGGMGNSITTDGDLEGRVTTVEYDVMFVVNVYTPNSGAELKRLSFRTCKWDQVFAAYVRGLEKVKPVVVIGDMNVAHEDKDLYNPKEKRMRQAAGTTPEERISFAEKLLGRDPPPSCRIMTEADSSEQRRGMDGHKRGPALVDTFRERYPDVHGVFSYWSTRARNRPMNRGMRLDYCLASRSLVDGPHGFLHDAFVLDAETVDVSDHCPVGVVLRL 1041
RP L T ++ILSWNVNG+RA + KG A++ L E+E VL LQE +++ + + + +SL+ Y T+W S +++GYSGTA+ R + + VR G+G S + D EGRV VE+D F++NVY PNSG LKRLS+R +WD + Y++ LEK KPV++ GD+N AH++ DLYNP R ++AG T EER SF L + VDTFR+++PDV G ++YW R R N+G RLDY L S + + +HD+++L V SDHCP+G+VL+L
Sbjct: 232 RPKPLSKDTKSVKILSWNVNGLRALL---KGSSAVE-LAEREDFDVLCLQETKLQ----------------EKDILNITKSLVDGYHYTYWTCSV--SKLGYSGTAIISRIK---------PISVRYGLGIS---EHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKELEKSKPVILTGDLNCAHQEIDLYNPAGNR--KSAGFTNEERQSFETNFLQK----------------------------GFVDTFRQKHPDVVG-YTYWGYRHGGRKTNKGWRLDYFLVSERVAEK----VHDSYILP--DVGGSDHCPIGLVLKL 501 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77142.15388.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig77142.15388.1 >prot_H-elongata_contig77142.15388.1 ID=prot_H-elongata_contig77142.15388.1|Name=mRNA_H-elongata_contig77142.15388.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=354bp VERQPTARPPALHPYTPQLRILSWNVNGIRAQVAKKKGRKALQQLVEKEQback to top mRNA from alignment at H-elongata_contig77142:163..2740- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig77142.15388.1 ID=mRNA_H-elongata_contig77142.15388.1|Name=mRNA_H-elongata_contig77142.15388.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2578bp|location=Sequence derived from alignment at H-elongata_contig77142:163..2740- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig77142:163..2740- >mRNA_H-elongata_contig77142.15388.1 ID=mRNA_H-elongata_contig77142.15388.1|Name=mRNA_H-elongata_contig77142.15388.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2124bp|location=Sequence derived from alignment at H-elongata_contig77142:163..2740- (Himanthalia elongata Himel1 dioecious)back to top |