prot_H-elongata_contig77115.15385.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig77115.15385.1
Unique Nameprot_H-elongata_contig77115.15385.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length40
Homology
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BLAST of mRNA_H-elongata_contig77115.15385.1 vs. uniprot
Match: D7G059_ECTSI (Similar to Tetratricopeptide repeat protein 37 (TPR repeat protein 37) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G059_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 6.590e-17
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 0 
Query:    1 EQAIRGFPACWEYWSDLGWCYHAEGKQAAALKAYTRADDL 40
            +QAIRG P  W YWSDLGWCYHAEGKQAAALKAYTRA+DL
Sbjct:  657 QQAIRGCPTSWSYWSDLGWCYHAEGKQAAALKAYTRAEDL 696
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BLAST of mRNA_H-elongata_contig77115.15385.1 vs. uniprot
Match: A0A6H5JG00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG00_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 6.600e-17
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 0 
Query:    1 EQAIRGFPACWEYWSDLGWCYHAEGKQAAALKAYTRADDL 40
            +QAIRG P  W YWSDLGWCYHAEGKQAAALKAYTRA+DL
Sbjct:  123 QQAIRGCPTSWSYWSDLGWCYHAEGKQAAALKAYTRAEDL 162
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BLAST of mRNA_H-elongata_contig77115.15385.1 vs. uniprot
Match: A0A836CP95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP95_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 8.080e-8
Identity = 23/37 (62.16%), Postives = 26/37 (70.27%), Query Frame = 0 
Query:    1 EQAIRGFPACWEYWSDLGWCYHAEGKQAAALKAYTRA 37
            +QA+ G P  W  W DLGW YH + KQAAALKAY RA
Sbjct:  622 QQALAGAPRDWRGWGDLGWVYHRQAKQAAALKAYARA 658
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig77115.15385.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G059_ECTSI6.590e-1785.00Similar to Tetratricopeptide repeat protein 37 (TP... [more]
A0A6H5JG00_9PHAE6.600e-1785.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CP95_9STRA8.080e-862.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..40
e-value: 5.3E-6
score: 28.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..39
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..40
score: 8.89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig77115contigH-elongata_contig77115:745..864 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig77115.15385.1mRNA_H-elongata_contig77115.15385.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig77115 745..864 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig77115.15385.1 ID=prot_H-elongata_contig77115.15385.1|Name=mRNA_H-elongata_contig77115.15385.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=40bp
EQAIRGFPACWEYWSDLGWCYHAEGKQAAALKAYTRADDL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom