prot_H-elongata_contig76986.15370.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig76986.15370.1
Unique Nameprot_H-elongata_contig76986.15370.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length47
Homology
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BLAST of mRNA_H-elongata_contig76986.15370.1 vs. uniprot
Match: D7FV12_ECTSI (GRIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV12_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 5.010e-13
Identity = 36/47 (76.60%), Postives = 42/47 (89.36%), Query Frame = 0 
Query:    1 RYVSSSNKKQVLDLMARMFSFTEEDKEMVGLSRRALPSIPGMLTAMF 47
            RYVSS +KKQVL+LMARMF+FTEE+KE VGLS R  P++PGMLTAMF
Sbjct:  284 RYVSSHHKKQVLELMARMFNFTEEEKEQVGLSNRG-PTLPGMLTAMF 329
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76986.15370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV12_ECTSI5.010e-1376.60GRIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig76986contigH-elongata_contig76986:184..1925 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig76986.15370.1mRNA_H-elongata_contig76986.15370.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig76986 184..1925 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig76986.15370.1 ID=prot_H-elongata_contig76986.15370.1|Name=mRNA_H-elongata_contig76986.15370.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=47bp
RYVSSSNKKQVLDLMARMFSFTEEDKEMVGLSRRALPSIPGMLTAMF
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