prot_H-elongata_contig76954.15365.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig76954.15365.1
Unique Name	prot_H-elongata_contig76954.15365.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	194

Homology

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BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: D8LMY1_ECTSI (Protein-synthesizing GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMY1_ECTSI)

HSP 1 Score: 340 bits (871), Expect = 1.180e-113
Identity = 171/194 (88.14%), Postives = 178/194 (91.75%), Query Frame = 0

Query:    1 VCTQTVRFKNELERNITIKLGYANAKIYKAVQGAVPGPGNFRSKGSHHADRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 194
            +  QTVRFKNELERNITIKLGYANAKI+KAV+GAVPGPGNFRSKGSHH DRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRL+NIIILQNK             VDLVKHDQAM+QHEQIRKFVAGTVA+DAPVIPISAVLKYNIDVVCEYI+CKIPIP
Sbjct:   42 LAVQTVRFKNELERNITIKLGYANAKIFKAVEGAVPGPGNFRSKGSHHGDRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLQNIIILQNK-------------VDLVKHDQAMLQHEQIRKFVAGTVADDAPVIPISAVLKYNIDVVCEYINCKIPIP 222

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BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: A0A835YYS7_9STRA (Protein-synthesizing GTPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYS7_9STRA)

HSP 1 Score: 285 bits (729), Expect = 1.380e-91
Identity = 147/192 (76.56%), Postives = 163/192 (84.90%), Query Frame = 0

Query:    4 QTVRFKNELERNITIKLGYANAKIYKAVQGAVPGP-GNFRSKGSHHADRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 194
            QTVRFKNELERNITIKLGYANAK+Y A +GA  G  GN+ S+GS HAD FEE+GK W LQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNE CPQPQTSEHLAAVEIMRL+NIIILQNK             VDLVK DQA++QHEQI++FVAGTVA++AP+IPISAV++YN+DVVCEYI   IPIP
Sbjct:   93 QTVRFKNELERNITIKLGYANAKVYNAQEGAREGELGNYTSRGSAHADVFEENGKQWHLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNK-------------VDLVKQDQALLQHEQIKRFVAGTVADNAPIIPISAVMRYNVDVVCEYICNNIPIP 271

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BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: A0A6U4HRZ6_9STRA (Protein-synthesizing GTPase n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HRZ6_9STRA)

HSP 1 Score: 283 bits (723), Expect = 1.160e-90
Identity = 144/191 (75.39%), Postives = 160/191 (83.77%), Query Frame = 0

Query:    4 QTVRFKNELERNITIKLGYANAKIYKAVQGAVPGPGNFRSKGSHHADRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 194
            QTVRFKNEL RNITIKLGYANAK+YKA   A   PGN+RSKGS H D FEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAAVEIMRL++IIILQNK             VDLVK + A+ QH+QIR+FVAGTVA+ APVIP+SAVLKYN+DV+CEY+  ++P P
Sbjct:   87 QTVRFKNELVRNITIKLGYANAKLYKARDAAPGVPGNYRSKGSAHPDVFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEPCPQPQTSEHLAAVEIMRLQHIIILQNK-------------VDLVKEEDALAQHQQIRRFVAGTVADSAPVIPMSAVLKYNVDVLCEYLVHRVPEP 264

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BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: A0A6S9GDD6_HETAK (Protein-synthesizing GTPase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GDD6_HETAK)

HSP 1 Score: 278 bits (711), Expect = 3.940e-89
Identity = 145/191 (75.92%), Postives = 158/191 (82.72%), Query Frame = 0

Query:    4 QTVRFKNELERNITIKLGYANAKIYKAVQGAVPGPGNFRSKGSHHADRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 194
            QTVRFKNELERNITIKLGYANAKIYKA      G G++RS GS   DRFEE GKTWEL RHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNE CPQPQTSEHLAAVEIMRL+NIIILQNK             VDLVK +QA+ QHEQI++FVAGTVA+ APV+P+SAVLKYNIDVVCEY+   +P+P
Sbjct:   78 QTVRFKNELERNITIKLGYANAKIYKAA--GEEGMGSYRSWGSSKPDRFEEGGKTWELVRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNK-------------VDLVKQEQALAQHEQIKRFVAGTVADAAPVVPVSAVLKYNIDVVCEYLAKDVPVP 253

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BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: A0A7S4A8Q2_9STRA (Protein-synthesizing GTPase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8Q2_9STRA)

HSP 1 Score: 275 bits (703), Expect = 4.140e-88
Identity = 149/192 (77.60%), Postives = 154/192 (80.21%), Query Frame = 0

Query:    4 QTVRFKNELERNITIKLGYANAKIYKAVQGAVPGPGNFRSKGSHHADRFEE-DGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 194
            QTVRFKNELERNITIKLGYANAKIYK V    PGPGNF S+GS   D FE+ DG  W L RHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNE CPQPQTSEHLAAVEIMRL+NI+ILQNK             VDLVK DQA  QHEQIRKFVAGTVA DAPVIPISAVLKYNID VCEY+   IP P
Sbjct:   58 QTVRFKNELERNITIKLGYANAKIYKRVA-ERPGPGNFCSRGSATPDAFEDGDGARWALARHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLENILILQNK-------------VDLVKPDQARAQHEQIRKFVAGTVAGDAPVIPISAVLKYNIDAVCEYVAHAIPTP 235

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BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: A0A7S2XYP2_9STRA (Protein-synthesizing GTPase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYP2_9STRA)

HSP 1 Score: 274 bits (700), Expect = 8.350e-88
Identity = 144/194 (74.23%), Postives = 159/194 (81.96%), Query Frame = 0

Query:    4 QTVRFKNELERNITIKLGYANAKIYKA---VQGAVPGPGNFRSKGSHHADRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 194
            QTVRFKNE+ERNITIKLGYANAKIY+A    +G  P  G +RSKGS  AD FEE G+TW L RHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAAVEIMRL ++IILQNK             VDLVK +QAMVQHEQI+KFVAGTVA++APVIPISAVL+YNIDV CE+I   IP+P
Sbjct:   86 QTVRFKNEMERNITIKLGYANAKIYQADKLEEGEAPQMGLYRSKGSSTADVFEEGGRTWRLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEPCPQPQTSEHLAAVEIMRLNHVIILQNK-------------VDLVKPEQAMVQHEQIKKFVAGTVADNAPVIPISAVLRYNIDVACEFIARNIPVP 266

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BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: A0A2R5G8R1_9STRA (Protein-synthesizing GTPase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8R1_9STRA)

HSP 1 Score: 273 bits (699), Expect = 3.600e-87
Identity = 138/191 (72.25%), Postives = 160/191 (83.77%), Query Frame = 0

Query:    4 QTVRFKNELERNITIKLGYANAKIYKAVQGAVPGPGNFRSKGSHHADRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 194
            +TVRFKNELERNITIKLGYANAKIY+ V    P PGN+ S+GS+ AD FE++  TWEL+RH+SFVDCPGHDILMATMLNGAAVMDAALLL+AGNE+CPQPQTSEHLAAVEIM+L+NIIILQNK             +DLVK D A+ QHEQIR+FVAGTVA+ +P+IPISAVLKYNIDV+CEY+   IP+P
Sbjct:   91 KTVRFKNELERNITIKLGYANAKIYECVNPDCPKPGNYTSRGSNTADVFEDEKGTWELRRHLSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAVEIMKLQNIIILQNK-------------IDLVKEDAAIQQHEQIRQFVAGTVADKSPIIPISAVLKYNIDVICEYMVKHIPVP 268

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BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: A0A812SA83_SYMMI (Protein-synthesizing GTPase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SA83_SYMMI)

HSP 1 Score: 272 bits (695), Expect = 1.520e-86
Identity = 145/191 (75.92%), Postives = 156/191 (81.68%), Query Frame = 0

Query:    4 QTVRFKNELERNITIKLGYANAKIYKAVQGAVPGPGNFRSKGSHHADRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 194
            QTVRFKNEL RNITIKLGYANAKIY+A  G     G +RSKGS  AD F EDGKTW +QRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNETCPQPQTSEHLAAVEIM+L +IIILQNK             VDLVK +QA  QHEQIRKFVAGTVA+ AP+IPISAVL+YNID+VCEYI   IPIP
Sbjct:   84 QTVRFKNELIRNITIKLGYANAKIYRA-DGPANEMGLYRSKGSSTADSFVEDGKTWNVQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNETCPQPQTSEHLAAVEIMKLPHIIILQNK-------------VDLVKQEQAEAQHEQIRKFVAGTVADSAPIIPISAVLRYNIDMVCEYIARYIPIP 260

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BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: K3WE95_GLOUD (Protein-synthesizing GTPase n=29 Tax=Oomycota TaxID=4762 RepID=K3WE95_GLOUD)

HSP 1 Score: 266 bits (681), Expect = 8.980e-85
Identity = 144/194 (74.23%), Postives = 154/194 (79.38%), Query Frame = 0

Query:    4 QTVRFKNELERNITIKLGYANAKIYKAVQGAVPGPGNFRSKGSHHADRFEE---DGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 194
            QTVRFKNELERNITIKLGYANAKIY+A  G   G G +R+ GS   DRF +   D   W LQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNE CPQPQTSEHLAA+EIMRL+NIIILQNK             VDL+K D A  QHEQI+KFVAGTVA+DAP+IPISAVLKYNIDVVCEYI   IPIP
Sbjct:   60 QTVRFKNELERNITIKLGYANAKIYRAENGT--GIGCYRAFGSSKPDRFVDEVDDNTVWVLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEVCPQPQTSEHLAAIEIMRLQNIIILQNK-------------VDLIKEDAACAQHEQIKKFVAGTVAHDAPIIPISAVLKYNIDVVCEYICRNIPIP 238

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BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Match: W7U2Z3_9STRA (Protein-synthesizing GTPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2Z3_9STRA)

HSP 1 Score: 266 bits (680), Expect = 1.230e-84
Identity = 139/190 (73.16%), Postives = 152/190 (80.00%), Query Frame = 0

Query:    5 TVRFKNELERNITIKLGYANAKIYKAVQGAVPGPGNFRSKGSHHADRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMVQHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP 194
            TVR K ELERNITIKLGYANAKIYK        PGN+R+KGS   D FEEDGKTW LQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAAVEIMRL NIIILQNK             VDLVK   A +QH+QIRKFVAGTVA+ +P+IPISAV K+NID+VCEY+  +IP+P
Sbjct:   47 TVRTKPELERNITIKLGYANAKIYKCDPAEEGVPGNYRAKGSSAPDVFEEDGKTWRLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNK-------------VDLVKPADASMQHDQIRKFVAGTVADASPIIPISAVKKFNIDIVCEYLVNRIPVP 223

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot

BLAST of mRNA_H-elongata_contig76954.15365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LMY1_ECTSI	1.180e-113	88.14	Protein-synthesizing GTPase n=2 Tax=Ectocarpus Tax...	[more]
A0A835YYS7_9STRA	1.380e-91	76.56	Protein-synthesizing GTPase n=2 Tax=Tribonema minu...	[more]
A0A6U4HRZ6_9STRA	1.160e-90	75.39	Protein-synthesizing GTPase n=4 Tax=Phaeomonas par...	[more]
A0A6S9GDD6_HETAK	3.940e-89	75.92	Protein-synthesizing GTPase n=1 Tax=Heterosigma ak...	[more]
A0A7S4A8Q2_9STRA	4.140e-88	77.60	Protein-synthesizing GTPase n=1 Tax=Pelagomonas ca...	[more]
A0A7S2XYP2_9STRA	8.350e-88	74.23	Protein-synthesizing GTPase (Fragment) n=1 Tax=Fib...	[more]
A0A2R5G8R1_9STRA	3.600e-87	72.25	Protein-synthesizing GTPase n=1 Tax=Hondaea fermen...	[more]
A0A812SA83_SYMMI	1.520e-86	75.92	Protein-synthesizing GTPase n=1 Tax=Symbiodinium m...	[more]
K3WE95_GLOUD	8.980e-85	74.23	Protein-synthesizing GTPase n=29 Tax=Oomycota TaxI...	[more]
W7U2Z3_9STRA	1.230e-84	73.16	Protein-synthesizing GTPase n=2 Tax=Monodopsidacea...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000795	Transcription factor, GTP-binding domain	PFAM	PF00009	GTP_EFTU	coord: 8..191 e-value: 1.3E-16 score: 60.7
None	No IPR available	GENE3D	3.40.50.300		coord: 1..194 e-value: 2.9E-42 score: 146.6
None	No IPR available	PANTHER	PTHR42854	FAMILY NOT NAMED	coord: 3..194
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..194

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig76954	contig	H-elongata_contig76954:439..2703 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig76954.15365.1	mRNA_H-elongata_contig76954.15365.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig76954 439..2703 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig76954.15365.1 ID=prot_H-elongata_contig76954.15365.1|Name=mRNA_H-elongata_contig76954.15365.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp
VCTQTVRFKNELERNITIKLGYANAKIYKAVQGAVPGPGNFRSKGSHHAD
RFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETC
PQPQTSEHLAAVEIMRLKNIIILQNKASESREFCLLSMSVDLVKHDQAMV
QHEQIRKFVAGTVANDAPVIPISAVLKYNIDVVCEYIHCKIPIP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000795	TF_GTP-bd_dom
IPR027417	P-loop_NTPase