prot_H-elongata_contig76922.15364.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig76922.15364.1
Unique Name	prot_H-elongata_contig76922.15364.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	123

Homology

[Close]

BLAST of mRNA_H-elongata_contig76922.15364.1 vs. uniprot
Match: A0A6H5KTK0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTK0_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 1.340e-13
Identity = 54/123 (43.90%), Postives = 70/123 (56.91%), Query Frame = 0

Query:   10 VLNVYDRLGCDVIGVQETRRSGYSAFTQAGYSVYCSGECGGKTCGKKGQGGVGLAIRT----SITRTSRSPEFISNRLLNITLELRGRAKAVTFFVAYAPT--VKQN-GGNKHA---FLTRLD 122
            V+ +    GCDVIG+QETRR G  +    GY +  SG   G T  K+G  GVG+AI+     S+    R+ E IS RL+ + L++ GR   VTF V YAPT  V+ N GG+ HA   F T LD
Sbjct:    3 VMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAG-TKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTNAGGDVHAKESFWTALD 123

[Close]

BLAST of mRNA_H-elongata_contig76922.15364.1 vs. uniprot
Match: A0A6H5KZE6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE6_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 3.540e-13
Identity = 51/125 (40.80%), Postives = 69/125 (55.20%), Query Frame = 0

Query:    8 LDVLNVYDRLGCDVIGVQETRRSGYSAFTQAGYSVYCSGECGGKTCGKKGQGGVGLAIRTSITRT----SRSPEFISNRLLNITLELRGRAKAVTFFVAYAPT--VKQNGGN----KHAFLTRLD 122
            + V+ +    GCDVIG+QETRR G  +    GY +  SG   G T  K+G  GVG+AI+ +I  +     R+ E IS RL+ + L++ GR   VTF V YAPT  V+   G     K +F T LD
Sbjct:   32 MTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAG-TKDKRGGHGVGIAIKEAIWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRSTAGGDVNAKDSFWTALD 154

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BLAST of mRNA_H-elongata_contig76922.15364.1 vs. uniprot
Match: A0A6H5JVN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN7_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 5.140e-13
Identity = 51/125 (40.80%), Postives = 69/125 (55.20%), Query Frame = 0

Query:    8 LDVLNVYDRLGCDVIGVQETRRSGYSAFTQAGYSVYCSGECGGKTCGKKGQGGVGLAIRTSITRT----SRSPEFISNRLLNITLELRGRAKAVTFFVAYAPT--VKQNGGN----KHAFLTRLD 122
            + V+ +    GCDVIG+QETRR G  +    GY +  SG   G T  K+G+ GVG+AI+ ++  T     R  E IS RL+ + L++ GR   VTF V YAPT  V+   G     K +F T LD
Sbjct:  178 MKVMQISSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAG-TKDKRGEQGVGIAIKEAMWETVGEEGRKVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRITAGGDVNAKDSFWTALD 300

[Close]

BLAST of mRNA_H-elongata_contig76922.15364.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 6.480e-13
Identity = 51/125 (40.80%), Postives = 68/125 (54.40%), Query Frame = 0

Query:    8 LDVLNVYDRLGCDVIGVQETRRSGYSAFTQAGYSVYCSGECGGKTCGKKGQGGVGLAIRT----SITRTSRSPEFISNRLLNITLELRGRAKAVTFFVAYAPT--VKQNGGN----KHAFLTRLD 122
            + V+ +    GCDVIG+QETRR G  +    GY +  SG   G T  K+G  GVG+AI+     S+    R+ E IS RL+ + L++ GR   VTF V YAPT  V+   G     K +F T LD
Sbjct:    1 MTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAG-TKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALD 123

[Close]

BLAST of mRNA_H-elongata_contig76922.15364.1 vs. uniprot
Match: A0A6H5KAA3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAA3_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 6.740e-13
Identity = 51/125 (40.80%), Postives = 69/125 (55.20%), Query Frame = 0

Query:    8 LDVLNVYDRLGCDVIGVQETRRSGYSAFTQAGYSVYCSGECGGKTCGKKGQGGVGLAIRT----SITRTSRSPEFISNRLLNITLELRGRAKAVTFFVAYAP--TVKQNGGN----KHAFLTRLD 122
            + V+ +    GCDVIG+QETRR+G  +    GY +  SG   G T  K+G  GVG+AI+     S+    R+ E IS RL+ + L++ GR   VTF V YAP  TV+   G     K +F T LD
Sbjct:    1 MTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAG-TKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPSETVRTTAGGDVNAKDSFWTALD 123

[Close]

BLAST of mRNA_H-elongata_contig76922.15364.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 6.810e-13
Identity = 51/125 (40.80%), Postives = 69/125 (55.20%), Query Frame = 0

Query:    8 LDVLNVYDRLGCDVIGVQETRRSGYSAFTQAGYSVYCSGECGGKTCGKKGQGGVGLAIRT----SITRTSRSPEFISNRLLNITLELRGRAKAVTFFVAYAPT--VKQNGGN----KHAFLTRLD 122
            + V+ +    GCDVIG+QETRR+G  +    GY +  SG   G T  K+G  GVG+AI+     S+    R+ E IS RL+ + L++ GR   VTF V YAPT  V+   G     K +F T LD
Sbjct:  109 MTVMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAG-TKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALD 231

[Close]

BLAST of mRNA_H-elongata_contig76922.15364.1 vs. uniprot
Match: A0A6H5L7A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A7_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 9.550e-13
Identity = 51/125 (40.80%), Postives = 68/125 (54.40%), Query Frame = 0

Query:    8 LDVLNVYDRLGCDVIGVQETRRSGYSAFTQAGYSVYCSGECGGKTCGKKGQGGVGLAIRT----SITRTSRSPEFISNRLLNITLELRGRAKAVTFFVAYAPT--VKQNGGN----KHAFLTRLD 122
            + V+ +    GCDVIG+QETRR G  +    GY +  SG   G T  K+G  GVG+AI+     S+    R+ E IS RL+ + L++ GR   VTF V YAPT  V+   G     K +F T LD
Sbjct:    1 MTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAG-TKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALD 123

[Close]

BLAST of mRNA_H-elongata_contig76922.15364.1 vs. uniprot
Match: A0A6H5L2M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2M5_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.240e-12
Identity = 50/116 (43.10%), Postives = 66/116 (56.90%), Query Frame = 0

Query:   18 GCDVIGVQETRRSGYSAFTQAGYSVYCSGECGGKTCGKKGQGGVGLAIRT----SITRTSRSPEFISNRLLNITLELRGRAKAVTFFVAYAPT--VKQNGGN----KHAFLTRLDI 123
            GCDVIG+QETRR+G  +    GY +  SG   G T  K+G  GVG+AI+     S+    R+ E IS RL+ + L++ GR   VTF V YAPT  V+   G     K +F T LD+
Sbjct:  140 GCDVIGLQETRRAGQGSIAHDGYVIIWSGARAG-TKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDV 253

[Close]

BLAST of mRNA_H-elongata_contig76922.15364.1 vs. uniprot
Match: A0A6H5JGX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGX2_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.300e-12
Identity = 50/125 (40.00%), Postives = 68/125 (54.40%), Query Frame = 0

Query:    8 LDVLNVYDRLGCDVIGVQETRRSGYSAFTQAGYSVYCSGECGGKTCGKKGQGGVGLAIRT----SITRTSRSPEFISNRLLNITLELRGRAKAVTFFVAYAPT--VKQNGGN----KHAFLTRLD 122
            + ++ +    GCDVIG+QETRR G  +    GY +  SG   G T  K+G  GVG+AI+     S+    R+ E IS RL+ + L++ GR   VTF V YAPT  V+   G     K +F T LD
Sbjct:   82 MTIMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAG-TKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALD 204

[Close]

BLAST of mRNA_H-elongata_contig76922.15364.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.320e-12
Identity = 51/125 (40.80%), Postives = 68/125 (54.40%), Query Frame = 0

Query:    8 LDVLNVYDRLGCDVIGVQETRRSGYSAFTQAGYSVYCSGECGGKTCGKKGQGGVGLAIRT----SITRTSRSPEFISNRLLNITLELRGRAKAVTFFVAYAPT--VKQNGGN----KHAFLTRLD 122
            + V+ +    GCDVIG+QETRR G  +    GY +  SG   G T  K+G  GVG+AI+     S+    R+ E IS RL+ + L++ GR   VTF V YAPT  V+   G     K +F T LD
Sbjct:  680 MTVMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAG-TKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALD 802

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig76922.15364.1 vs. uniprot

BLAST of mRNA_H-elongata_contig76922.15364.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KTK0_9PHAE	1.340e-13	43.90	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5KZE6_9PHAE	3.540e-13	40.80	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5JVN7_9PHAE	5.140e-13	40.80	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KBZ6_9PHAE	6.480e-13	40.80	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5KAA3_9PHAE	6.740e-13	40.80	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JMB4_9PHAE	6.810e-13	40.80	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5L7A7_9PHAE	9.550e-13	40.80	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L2M5_9PHAE	1.240e-12	43.10	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JGX2_9PHAE	1.300e-12	40.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K1H7_9PHAE	1.320e-12	40.80	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10		coord: 4..122 e-value: 4.2E-9 score: 38.2
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 9..107

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig76922	contig	H-elongata_contig76922:1193..1561 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig76922.15364.1	mRNA_H-elongata_contig76922.15364.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig76922 1193..1561 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig76922.15364.1 ID=prot_H-elongata_contig76922.15364.1|Name=mRNA_H-elongata_contig76922.15364.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp
MGRVGRALDVLNVYDRLGCDVIGVQETRRSGYSAFTQAGYSVYCSGECGG
KTCGKKGQGGVGLAIRTSITRTSRSPEFISNRLLNITLELRGRAKAVTFF
VAYAPTVKQNGGNKHAFLTRLDI

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036691	Endo/exonu/phosph_ase_sf