mRNA_H-elongata_contig76739.15344.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig76739.15344.1
Unique NamemRNA_H-elongata_contig76739.15344.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: D7FUW2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUW2_ECTSI)

HSP 1 Score: 299 bits (765), Expect = 3.230e-99
Identity = 151/208 (72.60%), Postives = 167/208 (80.29%), Query Frame = 1
Query:    1 LVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQKKPVQVVDSIVTAADNGTSTSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHL 624
            LVFLAGLGSGVTEA++VVTPAEVCKIRMQAQ   +   + +                 KYR V QTA V+ +EEG+GALYKGL PTVLRQGCNQA+NFTCYQ+FK QLS Y G +EL+ WQHMLLGGLSGGIGPC+NNPLDVVKTRLQKQVVIPGQ PKYGGF SAI +IA+EEGV+ALWKGL PRLMRIMPGQAITFMTYEW S  L
Sbjct:  105 LVFLAGLGSGVTEAIVVVTPAEVCKIRMQAQFHSLLDPEEMARR--------------KYRNVLQTAVVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQMFKTQLSLYTGSEELASWQHMLLGGLSGGIGPCVNNPLDVVKTRLQKQVVIPGQAPKYGGFVSAISLIAKEEGVKALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 298          
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: D8LI49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI49_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 1.710e-98
Identity = 152/208 (73.08%), Postives = 170/208 (81.73%), Query Frame = 1
Query:    1 LVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQKKPVQVVDSIVTAADNGTSTSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHL 624
            LVFLAGLGSGVTEAV+VVTPAEVCKIRMQ+Q        S+   AD         S+ KYR V QTATV+V+EEG+ ALYKGL PTVLRQGCNQA+NFTCYQVFK +LS  +G +EL+PW HMLLGGLSGGIGPC+NNPLDV KTRLQ+QV+IPGQ PKYGGF SAI +IA+EEGV+ALWKGL PRLMRIMPGQAITFMTYEW S  L
Sbjct:   92 LVFLAGLGSGVTEAVMVVTPAEVCKIRMQSQ--------SLQVIADG--------SSGKYRDVLQTATVVVREEGVRALYKGLAPTVLRQGCNQAVNFTCYQVFKTKLSDLLGTEELAPWHHMLLGGLSGGIGPCVNNPLDVSKTRLQQQVLIPGQAPKYGGFVSAISLIAKEEGVKALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 283          
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: A0A6V1U9P6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U9P6_HETAK)

HSP 1 Score: 275 bits (702), Expect = 1.780e-89
Identity = 141/207 (68.12%), Postives = 158/207 (76.33%), Query Frame = 1
Query:    4 VFLAGLGSGVTEAVLVVTPAEVCKIRMQAQKKPVQVVDSIVTAADNGTSTSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHL 624
            V LAGLGSGVTEA+LVVTPAEVCKIRMQ+Q   +    ++ T               KYR V QTA V+V+EEG GALYKG+VPT LRQGCNQA+NFTCYQ+FK Q     GR+EL+PWQHML+GGLSGG GP  NNPLDVVKTRLQKQ V PGQ PKY G G A+ VIA+EEGV ALWKGL PRLMRIMPGQAITFMTYE+ S H+
Sbjct:  110 VLLAGLGSGVTEAILVVTPAEVCKIRMQSQYHSMMDPAAVATR--------------KYRNVLQTAVVIVREEGPGALYKGVVPTTLRQGCNQAVNFTCYQIFKEQWLKRSGREELAPWQHMLIGGLSGGFGPAANNPLDVVKTRLQKQRVEPGQRPKYTGLGQAVVVIAKEEGVLALWKGLTPRLMRIMPGQAITFMTYEFVSKHV 302          
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: A0A836CM83_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM83_9STRA)

HSP 1 Score: 260 bits (664), Expect = 1.270e-83
Identity = 135/212 (63.68%), Postives = 158/212 (74.53%), Query Frame = 1
Query:    4 VFLAGLGSGVTEAVLVVTPAEVCKIRMQAQKKPVQVVDSIVTAADNGTSTSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHLISLSS 639
            VFLAGLGSGVTEAV+VVTPAEVCKIRMQAQ   +   + +                 KYR V QTA ++VKEEG+GALYKG+VPT LRQGCNQA+NF+ YQ+FK +  A     EL  WQHML+GGLSGG+GP +NNPLDVVKTRLQ+QVVIPG+ PKY G G  + VIA+EEGV ALWKGL PRL+RIMPGQAITF TYE+ S  +  L+S
Sbjct:  116 VFLAGLGSGVTEAVMVVTPAEVCKIRMQAQYHSMLDPEQMARR--------------KYRNVIQTAGLIVKEEGIGALYKGVVPTTLRQGCNQAVNFSFYQIFKTKWEAARDGKELIAWQHMLIGGLSGGMGPVVNNPLDVVKTRLQRQVVIPGEVPKYRGLGQGMAVIAKEEGVLALWKGLTPRLLRIMPGQAITFATYEFVSKKIHGLAS 313          
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: A0A6U4GJ12_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GJ12_9STRA)

HSP 1 Score: 256 bits (653), Expect = 4.870e-82
Identity = 138/218 (63.30%), Postives = 161/218 (73.85%), Query Frame = 1
Query:    4 VFLAGLGSGVTEAVLVVTPAEVCKIRMQAQ----KKPVQVVDSIVTAADNGTSTSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRD--ELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHLISLSS 639
            VFLAGLGSGVTEA+LVVTPAEVCKIRMQ+Q    K P    + +                 KYR VFQTA  +V+EEGLGALYKG+ PT+ RQGCNQA+NFT YQ  K  +SA   RD  EL+ WQH+LLGGLSGG+GP  NNPLDVVKTR+QKQV++PG+ PKY G  S IGVIAREEGV ALW+G+ PRLMRIMPGQAITFMTYE+   +L ++ S
Sbjct:  114 VFLAGLGSGVTEAILVVTPAEVCKIRMQSQYHSLKDPALRFEEV-----------------KYRNVFQTAYTIVREEGLGALYKGVGPTIARQGCNQAVNFTAYQSMKDWVSANF-RDGGELASWQHLLLGGLSGGMGPLANNPLDVVKTRMQKQVILPGETPKYAGMISGIGVIAREEGVGALWRGITPRLMRIMPGQAITFMTYEFMQKNLWTMIS 313          
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: W7U0T5_9STRA (Succinate fumarate mitochondrial transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0T5_9STRA)

HSP 1 Score: 247 bits (630), Expect = 2.710e-78
Identity = 133/213 (62.44%), Postives = 151/213 (70.89%), Query Frame = 1
Query:    7 FLAGLGSGVTEAVLVVTPAEVCKIRMQAQ----KKPVQVVDSIVTAADNGTSTSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHLISL 633
            FLAGLGSGVTEAVLVVTPAEVCKIR+QAQ      PVQ+ +                   KYR V QTA V+ +EEG+GALYKG+VPTV+RQG NQA+NFT YQ  K        R EL PW+ ML GGLSGG+GP +NNPLDVVKTRLQKQ ++ GQ PKY G   AI VI  EEGV ALWKG+ PRLMRIMPGQAITFMTYE+ S H+ S+
Sbjct:  130 FLAGLGSGVTEAVLVVTPAEVCKIRLQAQFHSMADPVQLANR------------------KYRNVLQTAVVVAREEGIGALYKGVVPTVMRQGINQAVNFTTYQAVKTAWLERQQRKELLPWESMLFGGLSGGLGPLVNNPLDVVKTRLQKQRIVEGQLPKYRGIFQAIPVIVSEEGVLALWKGITPRLMRIMPGQAITFMTYEFVSRHMKSV 324          
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: A0A7S4T6Q3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T6Q3_9STRA)

HSP 1 Score: 242 bits (617), Expect = 8.090e-78
Identity = 123/206 (59.71%), Postives = 149/206 (72.33%), Query Frame = 1
Query:    7 FLAGLGSGVTEAVLVVTPAEVCKIRMQAQKKPVQVVDSIVTAADNGTSTSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHL 624
            F AGL SG+TEA+LVVTPAEVCKIRMQ+Q   +     +                 KY  V QTAT +V+EEGLGALYKG+VPT++RQGCNQA+NF+ Y  FK  +  Y GR EL  W+ ++LGG+SGG+GP +NNPLDVVKTRLQKQVV PG+P KY G G +  +IA+EEG  ALWKG+ PRL+RIMPGQAITFMTYE  SS +
Sbjct:   34 FFAGLASGLTEAILVVTPAEVCKIRMQSQYHSLLDPQQMKHR--------------KYTNVVQTATTIVREEGLGALYKGVVPTMMRQGCNQAVNFSVYNWFKKMVLEYRGRKELDSWESLILGGVSGGMGPLVNNPLDVVKTRLQKQVVAPGKPAKYTGLGQSCALIAKEEGYAALWKGITPRLLRIMPGQAITFMTYEAVSSKM 225          
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: B7GCT1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GCT1_PHATC)

HSP 1 Score: 241 bits (616), Expect = 2.390e-76
Identity = 128/206 (62.14%), Postives = 150/206 (72.82%), Query Frame = 1
Query:    7 FLAGLGSGVTEAVLVVTPAEVCKIRMQAQKKPVQVVDSIVTAADNGTSTSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHL 624
            F AGL SG+TEAVLVVTPAEVCKIRMQ+Q     ++D             T+    KY  V QTA ++VKEEG GALYKG+VPT+LRQGCNQA+NFT Y   K Q+  + G D L+ WQ +L+GGLSGG+GP +NNPLDVVKTRLQKQVV  G+P KY G   A  VIA+EEGV ALWKG+ PRLMRIMPGQAITFMTYE  S+ +
Sbjct:  128 FTAGLFSGLTEAVLVVTPAEVCKIRMQSQYH--SMMDP------------TAMQHRKYTNVLQTAMLIVKEEGAGALYKGVVPTMLRQGCNQAVNFTAYSAIKQQVMQWQGTDSLASWQSLLIGGLSGGMGPVVNNPLDVVKTRLQKQVVAAGKPAKYTGLAQACVVIAKEEGVLALWKGITPRLMRIMPGQAITFMTYEAVSAQM 319          
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: A0A1Z5JX09_FISSO (Solute carrier family 25 (Mitochondrial citrate transporter), member 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JX09_FISSO)

HSP 1 Score: 242 bits (617), Expect = 5.720e-76
Identity = 124/209 (59.33%), Postives = 148/209 (70.81%), Query Frame = 1
Query:    7 FLAGLGSGVTEAVLVVTPAEVCKIRMQAQKKPVQVVDSIVTAADNGTSTSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHLISL 633
            F AGL SG+TEA+LVVTPAEVCKIRMQ+Q   +     +                 KY  V QTA ++VKEEGLGALYKG++PT+LRQGCNQA+NFT Y   K ++ A  G D L  WQ +L+GGLSGG+GP +NNPLDVVKTRLQKQV+ PG+ PKY G G A   I REEGV ALWKG+ PRL+RIMPGQAITFMTYE  S+ +  +
Sbjct:  169 FTAGLASGLTEAILVVTPAEVCKIRMQSQFHSMMDPSQLQKR--------------KYTNVIQTAFLIVKEEGLGALYKGVIPTMLRQGCNQAVNFTAYNYIKREVMARQGTDSLDSWQSLLIGGLSGGMGPLVNNPLDVVKTRLQKQVITPGKTPKYTGLGQACLKIGREEGVLALWKGITPRLLRIMPGQAITFMTYEAVSAQMTKM 363          
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Match: A0A7S2YD77_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YD77_9STRA)

HSP 1 Score: 234 bits (598), Expect = 3.060e-74
Identity = 123/212 (58.02%), Postives = 149/212 (70.28%), Query Frame = 1
Query:    7 FLAGLGSGVTEAVLVVTPAEVCKIRMQAQKKPVQVVDSIVTAADNGTSTSTSPSTF---KYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTCYQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQVVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMTYEWASSHLISL 633
            F AGL SG+TEAV+VVTPAEVCKIR+Q+Q   +                   PS     KY+ V Q A V+V+EEGLGALYKG+VPT+LRQG NQA+NFTCY   K  +  +   D+L  WQ +++GG+SGG+GP  NNP+D+VKTRLQKQV+ PG+ PKY G   A  VIAREEG+ ALWKG+ PRL+RIMPGQAITFMTYE  S  LISL
Sbjct:   83 FFAGLASGLTEAVVVVTPAEVCKIRLQSQFHSLM-----------------DPSQMHHRKYKNVVQAAYVIVREEGLGALYKGVVPTMLRQGINQAVNFTCYNAAKQWVMEWQQTDQLHHWQSLMIGGISGGVGPLANNPMDIVKTRLQKQVLAPGKTPKYTGLAQACVVIAREEGMLALWKGITPRLLRIMPGQAITFMTYEAVSRQLISL 277          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76739.15344.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUW2_ECTSI3.230e-9972.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LI49_ECTSI1.710e-9873.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6V1U9P6_HETAK1.780e-8968.12Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A836CM83_9STRA1.270e-8363.68Mitochondrial carrier domain-containing protein n=... [more]
A0A6U4GJ12_9STRA4.870e-8263.30Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7U0T5_9STRA2.710e-7862.44Succinate fumarate mitochondrial transporter n=2 T... [more]
A0A7S4T6Q3_9STRA8.090e-7859.71Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B7GCT1_PHATC2.390e-7662.14Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5JX09_FISSO5.720e-7659.33Solute carrier family 25 (Mitochondrial citrate tr... [more]
A0A7S2YD77_9STRA3.060e-7458.02Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig76739contigH-elongata_contig76739:2..1588 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score302.4
Seed ortholog evalue1.7e-79
Seed eggNOG ortholog2880.D7FUW2
Preferred nameSFC1
KEGG koko:K07964,ko:K15100
KEGG TC2.A.29.7
KEGG ReactionR07811
KEGG Pathwayko00531,ko01100,ko05205,map00531,map01100,map05205
KEGG ModuleM00078
GOsGO:0003674,GO:0005215,GO:0005310,GO:0005342,GO:0005469,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006839,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015138,GO:0015141,GO:0015238,GO:0015291,GO:0015297,GO:0015318,GO:0015556,GO:0015711,GO:0015740,GO:0015741,GO:0015744,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0019866,GO:0022804,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0034220,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071422,GO:0071702,GO:0098656,GO:1903825,GO:1905039
EggNOG free text desc.mitochondrial tricarboxylic acid transmembrane transport
EggNOG OGsKOG0756@1,KOG0756@2759
EC3.2.1.166
COG Functional cat.U
CAZyGH79
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00536,ko01000,ko02000
Hectar predicted targeting categorysignal peptide
Exons3
Model size642
Cds size642
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig76739.15344.1prot_H-elongata_contig76739.15344.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig76739 2..1588 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931171.6141536-CDS-H-elongata_contig76739:1..2831622931171.6141536-CDS-H-elongata_contig76739:1..283Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig76739 2..283 +
1691679727.6648057-CDS-H-elongata_contig76739:1..2831691679727.6648057-CDS-H-elongata_contig76739:1..283Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig76739 2..283 +
1622931171.6256914-CDS-H-elongata_contig76739:493..6611622931171.6256914-CDS-H-elongata_contig76739:493..661Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig76739 494..661 +
1691679727.6780055-CDS-H-elongata_contig76739:493..6611691679727.6780055-CDS-H-elongata_contig76739:493..661Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig76739 494..661 +
1622931171.6366365-CDS-H-elongata_contig76739:1396..15881622931171.6366365-CDS-H-elongata_contig76739:1396..1588Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig76739 1397..1588 +
1691679727.6879613-CDS-H-elongata_contig76739:1396..15881691679727.6879613-CDS-H-elongata_contig76739:1396..1588Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig76739 1397..1588 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig76739.15344.1

>prot_H-elongata_contig76739.15344.1 ID=prot_H-elongata_contig76739.15344.1|Name=mRNA_H-elongata_contig76739.15344.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=214bp
LVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQKKPVQVVDSIVTAADNGTS
TSTSPSTFKYRGVFQTATVLVKEEGLGALYKGLVPTVLRQGCNQAINFTC
YQVFKAQLSAYIGRDELSPWQHMLLGGLSGGIGPCINNPLDVVKTRLQKQ
VVIPGQPPKYGGFGSAIGVIAREEGVRALWKGLAPRLMRIMPGQAITFMT
YEWASSHLISLSS*
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mRNA from alignment at H-elongata_contig76739:2..1588+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig76739.15344.1 ID=mRNA_H-elongata_contig76739.15344.1|Name=mRNA_H-elongata_contig76739.15344.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1587bp|location=Sequence derived from alignment at H-elongata_contig76739:2..1588+ (Himanthalia elongata Himel1 dioecious)
CTCGTGTTTCTCGCAGGTCTAGGATCAGGCGTGACGGAAGCGGTTCTCGT AGTGACACCTGCTGAGGTTTGCAAAATTCGGATGCAGGCGCAGAAGAAGC CTGTCCAGGTCGTCGACAGCATTGTAACCGCCGCTGACAACGGGACATCG ACATCGACATCACCAAGCACTTTCAAGTACCGTGGGGTGTTCCAGACGGC AACGGTCCTCGTGAAGGAGGAAGGACTGGGCGCGCTTTACAAGGGACTGG TACCGACGGTGCTCCGACAGGGATGCAACCAGGTAAAAGCGTGTCTGAGT CCATGGAATCACACGCAGAACTGATACGATAAGGAGTGTGCTGTGCTGTT TTCCTTCGCCAGCGCGCATTCTCGGCAGAGGTGCCACGGCGTCGCTTCTT TCTCGCGGTGGCAAGTGCAAAACCGCTATCATGAAGCCGAGTAACATGAA GACATTATTTTCCTTTTTTATTTAATCGGTCCTGACCTTCAGGCGATCAA TTTCACGTGTTACCAAGTCTTCAAGGCACAACTTTCAGCCTATATCGGGA GGGATGAGCTGTCGCCCTGGCAGCATATGCTTCTCGGGGGGCTCAGCGGG GGCATCGGACCGTGCATCAACAACCCGCTCGACGTCGTCAAGACCCGCCT GCAAAAGCAGGTACGCCCTCGGCACCGTTTTTTCTCGAATTTTCCATCTG ACGACAACCTCCAGGAGCGGGCGGCAGTCAGAGACTAGGCTAAGCACAAA GAATTCCAGGGTAGCTAACTAGTGCTGAGGGGCGTGATGAGTGTCCCACC AACCTTTCTTTGTCACTTGTAAAGCACCACGCTCTGGTAGGGCACTTCAA CTGGTCAACCTGCACTGCGCGATCATCATTATTATCGTGACTTCATCTCT TGTACAAGTACAACAACACTCAATCCTGAGTTTATAGTATATCCGTAAAA TATCTACTACTACTGTAGTAGTATTGAAAACCGTTAGAGCCGGGGAAAAC AAAATTCGACCATTGGTTGACGAGGTCAAAAAGGGCTAAGCTTTCATCAA GAATTCGTAGGGGTGGACCAGGGAGATATTGCCAACGATGCGGTAGGTGG AATTTGTAATCTATAATGATAAAGTTATATTAATTACGGTGTATATTTAA AAAATGTTGCGAAAATCCATGATGATACTGTACATATTACAACTCCTCTA GATAAGGTATATTCCGGAGTTTTCCATGCGTTATTACTCGGGGGGGGAGG GGGGCTTTCATGCTTACATCCTTGAGCTGATTTGGGTGTTTTGGCTCGCA ATAGGCAGTACGTTAAATGTCTCACCCAATTTATGCTCCGGTCGCGCGTT AACGAACCCCTCGCGCGCATGGTGAACGTACTCCTATGGCTTTAGGTAGT GATCCCCGGCCAGCCGCCCAAGTACGGTGGTTTCGGGTCGGCAATCGGGG TGATTGCGCGCGAGGAAGGAGTAAGGGCGCTGTGGAAGGGCCTGGCGCCC CGCCTGATGCGCATCATGCCAGGCCAAGCTATCACCTTCATGACGTACGA GTGGGCCTCCTCGCACCTCATTTCACTCTCGAGCTGA
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Coding sequence (CDS) from alignment at H-elongata_contig76739:2..1588+

>mRNA_H-elongata_contig76739.15344.1 ID=mRNA_H-elongata_contig76739.15344.1|Name=mRNA_H-elongata_contig76739.15344.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1284bp|location=Sequence derived from alignment at H-elongata_contig76739:2..1588+ (Himanthalia elongata Himel1 dioecious)
CTCGTGTTTCTCGCAGGTCTAGGATCAGGCGTGACGGAAGCGGTTCTCGT
AGTGACACCTGCTGAGGTTTGCAAAATTCGGATGCAGGCGCAGAAGAAGC
CTGTCCAGGTCGTCGACAGCATTGTAACCGCCGCTGACAACGGGACATCG
ACATCGACATCACCAAGCACTTTCAAGTACCGTGGGGTGTTCCAGACGGC
AACGGTCCTCGTGAAGGAGGAAGGACTGGGCGCGCTTTACAAGGGACTGG
TACCGACGGTGCTCCGACAGGGATGCAACCAGCTCGTGTTTCTCGCAGGT
CTAGGATCAGGCGTGACGGAAGCGGTTCTCGTAGTGACACCTGCTGAGGT
TTGCAAAATTCGGATGCAGGCGCAGAAGAAGCCTGTCCAGGTCGTCGACA
GCATTGTAACCGCCGCTGACAACGGGACATCGACATCGACATCACCAAGC
ACTTTCAAGTACCGTGGGGTGTTCCAGACGGCAACGGTCCTCGTGAAGGA
GGAAGGACTGGGCGCGCTTTACAAGGGACTGGTACCGACGGTGCTCCGAC
AGGGATGCAACCAGGCGATCAATTTCACGTGTTACCAAGTCTTCAAGGCA
CAACTTTCAGCCTATATCGGGAGGGATGAGCTGTCGCCCTGGCAGCATAT
GCTTCTCGGGGGGCTCAGCGGGGGCATCGGACCGTGCATCAACAACCCGC
TCGACGTCGTCAAGACCCGCCTGCAAAAGCAGGCGATCAATTTCACGTGT
TACCAAGTCTTCAAGGCACAACTTTCAGCCTATATCGGGAGGGATGAGCT
GTCGCCCTGGCAGCATATGCTTCTCGGGGGGCTCAGCGGGGGCATCGGAC
CGTGCATCAACAACCCGCTCGACGTCGTCAAGACCCGCCTGCAAAAGCAG
GTAGTGATCCCCGGCCAGCCGCCCAAGTACGGTGGTTTCGGGTCGGCAAT
CGGGGTGATTGCGCGCGAGGAAGGAGTAAGGGCGCTGTGGAAGGGCCTGG
CGCCCCGCCTGATGCGCATCATGCCAGGCCAAGCTATCACCTTCATGACG
TACGAGTGGGCCTCCTCGCACCTCATTTCACTCTCGAGCTGAGTAGTGAT
CCCCGGCCAGCCGCCCAAGTACGGTGGTTTCGGGTCGGCAATCGGGGTGA
TTGCGCGCGAGGAAGGAGTAAGGGCGCTGTGGAAGGGCCTGGCGCCCCGC
CTGATGCGCATCATGCCAGGCCAAGCTATCACCTTCATGACGTACGAGTG
GGCCTCCTCGCACCTCATTTCACTCTCGAGCTGA
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