mRNA_H-elongata_contig767.15338.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig767.15338.1
Unique NamemRNA_H-elongata_contig767.15338.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5KAQ6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAQ6_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 4.700e-44
Identity = 98/240 (40.83%), Postives = 132/240 (55.00%), Query Frame = 1
Query:    1 IGNLKPLEKAILQEILEEYVD--IFAANPKSVPACEGAPMRLELKDPNENPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIKNWLDVIAIPSRTVAGHWPLLRATFQCLREGKLMVNLHK 714
            +G L  L+K  L E+L  +V+  +F  +PK V AC G+ + L L D    P+ A  R  SPE+R MI+ E+ +L   G I  + S  AA C  V+K DGT+R+  D+R LN  L + SGGLGD+  IFD +     F+  DLASGF Q+EI    R+ TAFRDADG L+++ R  FGL  +PSAF   +      V   G+ +WLD I + + T   H   L      LR   L VN  K
Sbjct:  126 MGQLGALQKQELVEVLATFVEEGLFPIDPKRVAACGGSELELPLIDEFCTPHAAKQRRFSPEERRMIRAEIQQLLDRGIIRPSMSPWAAQCLCVKKKDGTMRLCIDWRVLNKLLVADSGGLGDMQTIFDGLKGKRYFTQIDLASGFHQIEIAEKDRYKTAFRDADGMLYEFTRAAFGLTVLPSAFTRRVKSALGIV--DGVFSWLDDILVANETWEEHLAALVLVLTRLRAAGLSVNFPK 363          
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 4.780e-42
Identity = 98/240 (40.83%), Postives = 131/240 (54.58%), Query Frame = 1
Query:    1 IGNLKPLEKAILQEILEEYVD--IFAANPKSVPACEGAPMRLELKDPNENPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIKNWLDVIAIPSRTVAGHWPLLRATFQCLREGKLMVNLHK 714
            +G L  L+K  L E+L  +V+  +F  +PK V AC G  + L L D    P+ A  R  SPE+R MI+ E+ +L   G I  + S  AA C  V+K DGT+R+  D+R LN  L + SGGLGD+  IFD +     F+  DLASGF Q+EI    R+ TAFRDADG L+++ R  FGL  +PSAF   +      V   G+ +WLD I + + T   H   L      LR   L VN  K
Sbjct:  268 MGQLGALQKQELVEVLATFVEEGLFPIDPKRVAACGGTELELPLIDEFCTPHAAKQRRFSPEERRMIRAEIQQLLDRGIIRPSMSPWAAQCLCVKKKDGTMRLCIDWRVLNKLLVADSGGLGDMQTIFDGLKGKRYFTQIDLASGFHQIEIAEKDRYKTAFRDADGMLYEFTRAGFGLTVLPSAFTRRVKSALGIV--DGVFSWLDDILVANETWEEHLAALVLVLTRLRAAGLSVNFPK 505          
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5JQV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV6_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 5.680e-42
Identity = 95/240 (39.58%), Postives = 130/240 (54.17%), Query Frame = 1
Query:    1 IGNLKPLEKAILQEILEEYVD--IFAANPKSVPACEGAPMRLELKDPNENPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIKNWLDVIAIPSRTVAGHWPLLRATFQCLREGKLMVNLHK 714
            +G L  L+K  L  +L  +++  +F  +PK VPAC    + L L +    P+ A  R  SPE+R MI+ E+ +L   G I ++ S  AA C  V+K DGT+R+  D+R LN  L S SGGLGD+  IFD +     F+  DLASGF Q+EI    R+ TAFRDADG LW++ R  FGL  +P+AF   +      +   G+ +WLD I I S +   H   L      L    L VN  K
Sbjct:  106 LGTLGSLKKHQLVNVLAAFIEDGLFPIDPKRVPACMNGELELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAK 343          
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5KFK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK7_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.590e-41
Identity = 95/240 (39.58%), Postives = 130/240 (54.17%), Query Frame = 1
Query:    1 IGNLKPLEKAILQEILEEYVD--IFAANPKSVPACEGAPMRLELKDPNENPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIKNWLDVIAIPSRTVAGHWPLLRATFQCLREGKLMVNLHK 714
            +G L  L+K  L  +L  +++  +F  +PK VPAC    + L L +    P+ A  R  SPE+R MI+ E+ +L   G I ++ S  AA C  V+K DGT+R+  D+R LN  L S SGGLGD+  IFD +     F+  DLASGF Q+EI    R+ TAFRDADG LW++ R  FGL  +P+AF   +      +   G+ +WLD I I S +   H   L      L    L VN  K
Sbjct:  108 LGTLGSLKKHQLVNVLAAFIEDGLFPIDPKRVPACMNGELELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAK 345          
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.760e-41
Identity = 95/240 (39.58%), Postives = 130/240 (54.17%), Query Frame = 1
Query:    1 IGNLKPLEKAILQEILEEYVD--IFAANPKSVPACEGAPMRLELKDPNENPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIKNWLDVIAIPSRTVAGHWPLLRATFQCLREGKLMVNLHK 714
            +G L  L+K  L  +L  +++  +F  +PK VPAC    + L L +    P+ A  R  SPE+R MI+ E+ +L   G I ++ S  AA C  V+K DGT+R+  D+R LN  L S SGGLGD+  IFD +     F+  DLASGF Q+EI    R+ TAFRDADG LW++ R  FGL  +P+AF   +      +   G+ +WLD I I S +   H   L      L    L VN  K
Sbjct:  630 LGTLGSLKKHQLVNVLAAFIEDGLFPIDPKRVPACMNGELELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAK 867          
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5L7W0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W0_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 2.660e-40
Identity = 81/185 (43.78%), Postives = 110/185 (59.46%), Query Frame = 1
Query:    1 IGNLKPLEKAILQEILEEYVD--IFAANPKSVPACEGAPMRLELKDPNENPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAF 549
            +G L  L+K  L  +L  +++  +F  +PK VPAC    + L L +    P+ A  R  SPE+R MI+ E+ +L   G I ++ S  AA C  V+K DGT+R+  D+R LN  L S SGGLGD+  IFD +     F+  DLASGF Q+EI    R  TAFRDADG LW++ R  FGL  +P+AF
Sbjct:   55 LGTLGSLKKHQLVNVLAAFIEDGLFPIDPKRVPACINGELELPLINEFCTPFAAKQRRVSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKYRSKTAFRDADGMLWEFTRAGFGLTVLPAAF 239          
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5KGF2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF2_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 7.270e-40
Identity = 88/218 (40.37%), Postives = 124/218 (56.88%), Query Frame = 1
Query:    1 IGNLKPLEKAILQEILEEYVD--IFAANPKSVPACEGAPMRLELKDPNENPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIKNWLDVIAIPSRTVAGH 648
            +G L  L+K  +  +L  +++  +F  +PK VPAC    + L L +    P+ A  R  SPE+R MI+ E+ +L   G I ++ SA AA C  V+K DGT+R+  D+R LN  L S SGGL D+  IFD +     F+  DLASGF Q+EI    R+ TAFRDADG LW++ R  FGL  +P+AF   +      +   G+ +WLD I I S +   H
Sbjct:   31 LGTLGSLKKRQVVNVLAAFIEDGLFPIDPKRVPACINGELELPLINEFCTPFAAKQRRLSPEERRMIRAEIQQLVDRGVIRQSMSAWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLADMQTIFDGLKGKKYFTQVDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWQEH 246          
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5J659_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J659_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 2.260e-39
Identity = 87/210 (41.43%), Postives = 120/210 (57.14%), Query Frame = 1
Query:    1 IGNLKPLEKAILQEILEEYVD--IFAANPKSVPACEGAPMRLELKDPNENPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIKNWLDVIAI 624
            +G L  L+K  L  +L  +++  +F  +PK VPAC    + L L +    P+ A  R  SPE+R MI+ E+ +L   G I +  S  AA CS V+K DGT+R+  D+R LN  L S SGGLGD+  I D +     F+  DLASGF Q+EI    R+ TAFRDADG LW++ R  FGL  +P+AF   +      +   G+ +WLD I I
Sbjct:  159 LGTLGSLKKHQLVNVLAAFIEDGLFPIDPKRVPACMNGELELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQPMSLWAAQCSCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTILDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILI 366          
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5L7I8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7I8_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 7.460e-38
Identity = 90/240 (37.50%), Postives = 125/240 (52.08%), Query Frame = 1
Query:    1 IGNLKPLEKAILQEILEEYVD--IFAANPKSVPACEGAPMRLELKDPNENPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIKNWLDVIAIPSRTVAGHWPLLRATFQCLREGKLMVNLHK 714
            +G    L+K  L  +L  +++  +F  +PK VPAC      L L +    P+ A  R  +P  R MI+ E+ +L   G I ++ S  AA C  V+K DGT+R+  D+R LN  L S SGG GD+  IFD +     F+  DLASGF Q+EI    R+ TAFRDADG LW++ R  FGL  + +AF   +   +  +   G+ +WLD I I S T   H   L      L    L V+  K
Sbjct:  127 LGTAGSLKKQQLVNVLAAFIEDGLFPLDPKRVPACINGEYELPLINEFCTPFAAKQRRFAPAGRRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGWGDMQTIFDGLKGKKYFTQLDLASGFRQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLAAAFTRRVKSAWGHLS--GVFSWLDDIVIASDTWEEHVATLTLVLNRLLAAGLFVSFAK 364          
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Match: A0A6H5KIS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS6_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 2.550e-35
Identity = 85/201 (42.29%), Postives = 110/201 (54.73%), Query Frame = 1
Query:  118 LELKDPNE--NPYVAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVRVVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIHVDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIKNWLDVIAIPSRTVAGHWPLLRATFQCLREGKLMVNLHK 714
            LEL   NE   P+ A  R  SPE+R MI+ E+ +L   G I ++ S  AA C  V+K DGT+R+  D+R LN  L S SGGLGD+  IFD +     F+  DLASGF Q+EI    R+ TAFRDADG LW++ R  FGL  +P+AF   +      +   G+ +WLD I I S +   H   L      L    L VN  K
Sbjct:    5 LELPLINEFCTPFAAKQRRFSPEERRMIRAEIQQLVDRGVIRQSMSPWAAQCLCVKKKDGTLRLCIDWRELNKLLVSDSGGLGDMQTIFDGLKGKKYFTQLDLASGFHQMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAK 203          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig767.15338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KAQ6_9PHAE4.700e-4440.83Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KBF4_9PHAE4.780e-4240.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQV6_9PHAE5.680e-4239.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFK7_9PHAE1.590e-4139.58Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KEH2_9PHAE1.760e-4139.58RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5L7W0_9PHAE2.660e-4043.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGF2_9PHAE7.270e-4040.37Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5J659_9PHAE2.260e-3941.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7I8_9PHAE7.460e-3837.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIS6_9PHAE2.550e-3542.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig767contigH-elongata_contig767:1768..2481 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score107.1
Seed ortholog evalue1.2e-20
Seed eggNOG ortholog3656.XP_008446938.1
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs37RRH@33090,3G8MV@35493,4JM10@91835,COG2801@1,KOG0017@2759
COG Functional cat.H
Best tax levelfabids
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size714
Cds size714
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931171.2319179-CDS-H-elongata_contig767:1767..24811622931171.2319179-CDS-H-elongata_contig767:1767..2481Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig767 1768..2481 -
1691679727.5234458-CDS-H-elongata_contig767:1767..24811691679727.5234458-CDS-H-elongata_contig767:1767..2481Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig767 1768..2481 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig767.15338.1prot_H-elongata_contig767.15338.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig767 1768..2481 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig767.15338.1

>prot_H-elongata_contig767.15338.1 ID=prot_H-elongata_contig767.15338.1|Name=mRNA_H-elongata_contig767.15338.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=238bp
IGNLKPLEKAILQEILEEYVDIFAANPKSVPACEGAPMRLELKDPNENPY
VAPMRHHSPEQRGMIQVEVVKLRGSGAIEEATSALAANCSTVRKNDGTVR
VVQDFRGLNSHLKSQSGGLGDLAHIFDEMGKMSCFSSCDLASGFLQLEIH
VDGRHLTAFRDADGKLWQYVRCRFGLKTVPSAFANYMGGRFMPVKCQGIK
NWLDVIAIPSRTVAGHWPLLRATFQCLREGKLMVNLHK
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mRNA from alignment at H-elongata_contig767:1768..2481-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig767.15338.1 ID=mRNA_H-elongata_contig767.15338.1|Name=mRNA_H-elongata_contig767.15338.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=714bp|location=Sequence derived from alignment at H-elongata_contig767:1768..2481- (Himanthalia elongata Himel1 dioecious)
ATAGGCAATCTCAAGCCACTCGAGAAAGCCATCCTGCAGGAGATACTCGA GGAGTACGTCGATATCTTCGCCGCAAACCCCAAGAGCGTGCCGGCCTGCG AGGGGGCACCCATGCGCCTCGAGCTGAAGGATCCCAACGAGAACCCGTAC GTAGCGCCGATGCGTCACCACAGTCCGGAACAGCGGGGGATGATCCAGGT GGAAGTAGTCAAGCTCAGAGGGAGCGGGGCGATCGAGGAGGCCACTTCAG CCTTGGCAGCGAACTGCTCCACCGTGCGCAAAAACGATGGGACCGTACGC GTGGTCCAGGACTTTCGCGGCCTCAACTCCCACCTGAAGTCGCAGAGCGG AGGCCTCGGAGACCTGGCACACATATTTGATGAGATGGGGAAGATGTCGT GTTTCTCAAGCTGCGATCTCGCGTCGGGGTTCCTGCAACTCGAAATCCAC GTGGACGGTAGGCACCTGACGGCCTTCCGCGATGCCGACGGGAAGCTCTG GCAGTACGTGCGGTGCCGATTCGGCCTCAAGACAGTACCGTCAGCCTTCG CGAACTACATGGGAGGCAGGTTCATGCCCGTTAAATGCCAAGGAATAAAG AACTGGCTTGACGTCATCGCCATCCCATCGCGAACAGTCGCGGGGCACTG GCCGCTGCTCCGAGCCACTTTCCAATGCCTGCGGGAGGGCAAGCTCATGG TTAACCTCCATAAA
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Coding sequence (CDS) from alignment at H-elongata_contig767:1768..2481-

>mRNA_H-elongata_contig767.15338.1 ID=mRNA_H-elongata_contig767.15338.1|Name=mRNA_H-elongata_contig767.15338.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1428bp|location=Sequence derived from alignment at H-elongata_contig767:1768..2481- (Himanthalia elongata Himel1 dioecious)
ATAGGCAATCTCAAGCCACTCGAGAAAGCCATCCTGCAGGAGATACTCGA
GGAGTACGTCGATATCTTCGCCGCAAACCCCAAGAGCGTGCCGGCCTGCG
AGGGGGCACCCATGCGCCTCGAGCTGAAGGATCCCAACGAGAACCCGTAC
GTAGCGCCGATGCGTCACCACAGTCCGGAACAGCGGGGGATGATCCAGGT
GGAAGTAGTCAAGCTCAGAGGGAGCGGGGCGATCGAGGAGGCCACTTCAG
CCTTGGCAGCGAACTGCTCCACCGTGCGCAAAAACGATGGGACCGTACGC
GTGGTCCAGGACTTTCGCGGCCTCAACTCCCACCTGAAGTCGCAGAGCGG
AGGCCTCGGAGACCTGGCACACATATTTGATGAGATGGGGAAGATGTCGT
GTTTCTCAAGCTGCGATCTCGCGTCGGGGTTCCTGCAACTCGAAATCCAC
GTGGACGGTAGGCACCTGACGGCCTTCCGCGATGCCGACGGGAAGCTCTG
GCAGTACGTGCGGTGCCGATTCGGCCTCAAGACAGTACCGTCAGCCTTCG
CGAACTACATGGGAGGCAGGTTCATGCCCGTTAAATGCCAAGGAATAAAG
AACTGGCTTGACGTCATCGCCATCCCATCGCGAACAGTCGCGGGGCACTG
GCCGCTGCTCCGAGCCACTTTCCAATGCCTGCGGGAGGGCAAGCTCATGG
TTAACCTCCATAAAATAGGCAATCTCAAGCCACTCGAGAAAGCCATCCTG
CAGGAGATACTCGAGGAGTACGTCGATATCTTCGCCGCAAACCCCAAGAG
CGTGCCGGCCTGCGAGGGGGCACCCATGCGCCTCGAGCTGAAGGATCCCA
ACGAGAACCCGTACGTAGCGCCGATGCGTCACCACAGTCCGGAACAGCGG
GGGATGATCCAGGTGGAAGTAGTCAAGCTCAGAGGGAGCGGGGCGATCGA
GGAGGCCACTTCAGCCTTGGCAGCGAACTGCTCCACCGTGCGCAAAAACG
ATGGGACCGTACGCGTGGTCCAGGACTTTCGCGGCCTCAACTCCCACCTG
AAGTCGCAGAGCGGAGGCCTCGGAGACCTGGCACACATATTTGATGAGAT
GGGGAAGATGTCGTGTTTCTCAAGCTGCGATCTCGCGTCGGGGTTCCTGC
AACTCGAAATCCACGTGGACGGTAGGCACCTGACGGCCTTCCGCGATGCC
GACGGGAAGCTCTGGCAGTACGTGCGGTGCCGATTCGGCCTCAAGACAGT
ACCGTCAGCCTTCGCGAACTACATGGGAGGCAGGTTCATGCCCGTTAAAT
GCCAAGGAATAAAGAACTGGCTTGACGTCATCGCCATCCCATCGCGAACA
GTCGCGGGGCACTGGCCGCTGCTCCGAGCCACTTTCCAATGCCTGCGGGA
GGGCAAGCTCATGGTTAACCTCCATAAA
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