mRNA_H-elongata_contig76609.15330.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig76609.15330.1 vs. uniprot
Match: D7FNA6_ECTSI (Similar to titin isoform N2-B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA6_ECTSI) HSP 1 Score: 676 bits (1744), Expect = 2.890e-217 Identity = 345/471 (73.25%), Postives = 390/471 (82.80%), Query Frame = 1
Query: 1 LTGNGADAVIYTNGVETSTERRGADASNAGNQLSGTFTLKLRGWETEA-NFNAAETEMAAALGSLPNIGSVDVTRKGPDGQLGYSWFITFIENPGSFPAGSGDVALLFPNFSDLKGEGAWCTTEEMSVGSSGLSGAFVLAFTAKL------LTHRPSAIPHSASPQTQVESSLEALDGVGNVIVARTTHTDGYTWTVSFTTCRANETSGADVCNTGDVELLFFAANGSLSGCL--DGPATGSMVVVNGSAGSSVDVVDLSDGPPYRYYITGLEAGTVIYARISAHTLMSYGYSTLSNPEFATPSNVRPGAPAAVRLWTSSELSITLRWDHPTVDGAGEKVSGYELWMGEWATSNFRLVYDGVYDRDVTSFTVDTRWNQILESGRTYRFRVRAVNHCSSVDMSSICYGDFSESMAYTVRNPRMPSAPKQPLRDSLTNLGTSANHDAQVGLLWSAPMDNGGSEVLSYKVRFED 1386
LTGNGA IY +G ETS++RRGAD S GNQLSGTFTL LRGWETE+ +FNAA+TEM AL +LPN+GSV V RKGPDGQLGYSW++TF+ENPGSFPAGSGDVALL + S L G+GAWCT EEMS G+ LSGAFVLAFTA +T +P+++ + +VE+SLEALD VGNV+V RTTHTDGYTWTV+F +CRAN+TSGADVCNTGDVEL+ FAANGSLSGC GPA+ SMVVVNGSAG VD++DLSDGPPYR+ ITGLEAGT IYAR+SAHTLMSYGY+ LS PEFATPSNV+PG PAAVRL +SE SI + WDHPTVDG G ++GYELWMGEWATS+FRLVYDGV D D TSFTVDT LESGR YRF+VRAVN+CS+VD SICYGDFS S AYTVR PRMPSAP QPLRDSLTNLGT+A DA+VG+LWSAPMDNGGSEVLSYKVRFED
Sbjct: 1178 LTGNGAAVAIYADGEETSSDRRGADPSVVGNQLSGTFTLTLRGWETESIDFNAADTEMELALEALPNVGSVSVNRKGPDGQLGYSWYVTFVENPGSFPAGSGDVALLSTDSSSLGGDGAWCTVEEMSAGTPELSGAFVLAFTASDDGGSGGVTRYTDELPYNSLAE-EVEASLEALDEVGNVVVTRTTHTDGYTWTVTFASCRANDTSGADVCNTGDVELISFAANGSLSGCYGGSGPASSSMVVVNGSAGEEVDMMDLSDGPPYRHDITGLEAGTAIYARVSAHTLMSYGYAGLSKPEFATPSNVQPGPPAAVRLVETSESSIAVEWDHPTVDG-GADIAGYELWMGEWATSSFRLVYDGVDDEDTTSFTVDTSNFPELESGRAYRFKVRAVNYCSAVDTGSICYGDFSPSTAYTVREPRMPSAPTQPLRDSLTNLGTAAYDDAEVGILWSAPMDNGGSEVLSYKVRFED 1646
BLAST of mRNA_H-elongata_contig76609.15330.1 vs. uniprot
Match: A0A6H5JXK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK7_9PHAE) HSP 1 Score: 669 bits (1727), Expect = 5.350e-215 Identity = 345/483 (71.43%), Postives = 388/483 (80.33%), Query Frame = 1
Query: 1 LTGNGADAVIYTNGVETSTERRGADASNAGNQLSGTFTLKLRGWETEA-------------NFNAAETEMAAALGSLPNIGSVDVTRKGPDGQLGYSWFITFIENPGSFPAGSGDVALLFPNFSDLKGEGAWCTTEEMSVGSSGLSGAFVLAFTAKL------LTHRPSAIPHSASPQTQVESSLEALDGVGNVIVARTTHTDGYTWTVSFTTCRANETSGADVCNTGDVELLFFAANGSLSGCL--DGPATGSMVVVNGSAGSSVDVVDLSDGPPYRYYITGLEAGTVIYARISAHTLMSYGYSTLSNPEFATPSNVRPGAPAAVRLWTSSELSITLRWDHPTVDGAGEKVSGYELWMGEWATSNFRLVYDGVYDRDVTSFTVDTRWNQILESGRTYRFRVRAVNHCSSVDMSSICYGDFSESMAYTVRNPRMPSAPKQPLRDSLTNLGTSANHDAQVGLLWSAPMDNGGSEVLSYKVRFED 1386
LTGNGA IY +G ETS++RRGAD S GNQLSGTFTL LRGWETE +FNAA+TEM AL +LPN+GSV V RKGPDGQLGYSW++TF+ENPGSFPAGSGDVALL + S L GEGAWCT EEMS G+ LSGAF+LAFTA +T +P+++ + +VE+SLEALD VGNVIV RTTHTDG+TWTV+F++CRAN+TSGADVCNTGDVEL+ FAANGSLSGC GPA+ SMVVVNGSAG VD+VDLSDGPPYRY ITGLEAGT IYAR+SAHTLMSYGY+ LS PEFA PSNV+PG P AVRL +SE SI + WDHPTVDG G ++GYELWMGEWATS+FRLVYDGV D D TSFTV T LESGR YRF+VRAVN+CS+VD SICYGDFS S AYTVR PRMPSAP QPLRDSLTNLGT+AN DA+VG+LWSAPMDNGGSEVLSYKVRFED
Sbjct: 974 LTGNGAAVAIYADGEETSSDRRGADPSVVGNQLSGTFTLTLRGWETEVGIMVFRHAVSKNIDFNAADTEMELALEALPNVGSVSVNRKGPDGQLGYSWYVTFVENPGSFPAGSGDVALLSTDSSSLGGEGAWCTVEEMSAGTPELSGAFILAFTASDDGGSGGVTRYTDELPYNSLAE-EVEASLEALDEVGNVIVTRTTHTDGFTWTVTFSSCRANDTSGADVCNTGDVELISFAANGSLSGCYGGSGPASSSMVVVNGSAGEEVDMVDLSDGPPYRYDITGLEAGTAIYARVSAHTLMSYGYAGLSKPEFAIPSNVQPGPPPAVRLVETSESSIAVEWDHPTVDG-GVDIAGYELWMGEWATSSFRLVYDGVDDEDTTSFTVATSNFPELESGRAYRFKVRAVNYCSAVDTGSICYGDFSPSTAYTVREPRMPSAPTQPLRDSLTNLGTAANDDAEVGILWSAPMDNGGSEVLSYKVRFED 1454
BLAST of mRNA_H-elongata_contig76609.15330.1 vs. uniprot
Match: A0A833SR71_PHYIN (Fibronectin type III domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SR71_PHYIN) HSP 1 Score: 318 bits (815), Expect = 7.770e-93 Identity = 191/468 (40.81%), Postives = 273/468 (58.33%), Query Frame = 1
Query: 1 LTGNGADAVIYTNGVETSTERRGADASNAGNQLSGTFTLKLRGWETEA-NFNAAETEMAAALGSLPNIGSVDVTRKGPDGQLGYSWFITFIENPGSFPAGSGDVALLFPNFSDLKGEGAWCTTEEMSVGSSGLSGAFVLAFTAKLLTHRPSAI-PHSASPQTQVESSLEALDGVGNVIVARTTHTDGYTWTVSFTTCRANETSGADVCNTGDVELLFFAANGSLSGCLDGPATGSMVV---VNGSA-GSSVDVVDLSDGPPYRYYITGLEAGTVIYARISAHTLMSYGYSTLSNPEFATPSNVRPGAPAAVRLWTSSELSITLRWDHPTVDGAGEKVSGYELWMGEWATSNFRLVYDGVYDRDVTSFTVDTRWNQILESGRTYRFRVRAVNHCSSVDMSSICYGDFSESMAYTVRNPRMPSAPKQPLRDSLTNLGTSANHDAQVGLLWSAPMDNGGSEVLSYKVRFED 1386
L GNGA ++YT ++T S GN++SG F +KL G TE + +A++T + + L +LPN+G+V VTR P + YSW +TF NPGSFP G+G++ L + + L+G + + GS L G F L+ T +T + + P+ ++ +LE L +G V V+R T++DG++W V+F+ CR N VCN GDV LL A + G L PA S+ V V G A +++ V DLS G P++ I+ L GT YAR+ H +S+G+ +S PEF T N+ PG P V L +S+ SIT+ W+ PTV+G G VSGYELW+ EWA S++R VYD D T+ T + ++ESG Y F+VRAVN CSS + ++ CYG FSE + YTVR+P +P P RDS T + T+A +D V + W+ P DNGGS V SYK+ +D
Sbjct: 1136 LQGNGAGILVYT---RSATPDPTVPVSVGGNRVSGYFKVKLGGHTTERISHDASDTTVKSKLEALPNVGTVSVTRSTPSLKTEYSWTVTFTANPGSFPIGAGNIDTLVADSTLLRGTNSQAAVTVVQQGSLPLDGTFKLSNTVGGVTQTTAKLSPYDTGEG--IQRALETLPSIGGVSVSRQTNSDGFSWFVTFSGCRLNPA----VCNIGDVNLLDKVATSLVGGLL--PAVPSVTVTEVVKGVAPATTLLVTDLSGGDPFQTVISSLTYGTKYYARVYWHNSVSFGHRAVSVPEFVTTKNLPPGPPWPVTLVSSTATSITVAWEEPTVNG-GATVSGYELWISEWAESSYRKVYDRPNDAVAMQTTLQTSADNVIESGHKYSFKVRAVNFCSSENTNAACYGAFSEPVEYTVRSPVVPDPPVSLTRDSRTTINTNAANDGIVFINWTPPKDNGGSPVTSYKLFMDD 1591
BLAST of mRNA_H-elongata_contig76609.15330.1 vs. uniprot
Match: W2R3C1_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora parasitica TaxID=4792 RepID=W2R3C1_PHYPN) HSP 1 Score: 318 bits (814), Expect = 1.070e-92 Identity = 190/468 (40.60%), Postives = 270/468 (57.69%), Query Frame = 1
Query: 1 LTGNGADAVIYTNGVETSTERRGADASNAGNQLSGTFTLKLRGWETEA-NFNAAETEMAAALGSLPNIGSVDVTRKGPDGQLGYSWFITFIENPGSFPAGSGDVALLFPNFSDLKGEGAWCTTEEMSVGSSGLSGAFVLAFTAKLLTHRPSAI-PHSASPQTQVESSLEALDGVGNVIVARTTHTDGYTWTVSFTTCRANETSGADVCNTGDVELLFFAANGSLSGCLDGPATGSMVV---VNGSAGSSVDVV-DLSDGPPYRYYITGLEAGTVIYARISAHTLMSYGYSTLSNPEFATPSNVRPGAPAAVRLWTSSELSITLRWDHPTVDGAGEKVSGYELWMGEWATSNFRLVYDGVYDRDVTSFTVDTRWNQILESGRTYRFRVRAVNHCSSVDMSSICYGDFSESMAYTVRNPRMPSAPKQPLRDSLTNLGTSANHDAQVGLLWSAPMDNGGSEVLSYKVRFED 1386
L GNGA +Y+ G T S GN++SG F LKL G TE + ++++T + + L +LPN+G+V VTR P + YSW +TF NPGSFP G+G++ L + + L+G + GS L G F L++T +T + + P+ ++ +LE L +G V V+R T++DGY+W ++F CR N VCN GDV LL A + G PA ++VV V G A +++ +V DLS G P++ I+ L GT YAR+ H +S+GY L PEF T N+ PGAP V L +S+ SIT+ W+ PTV+G G VSGYELW+ EWA S++R VYD D T+ T + ++ESG Y F+VRAVN CSS + ++ CYG FS+ + YTVR+P +P P RDS T + T+A +D + W+ P DNGGS V SYK+ +D
Sbjct: 1141 LQGNGAGITVYSRGA---TPDPAVPVSVGGNRVSGYFKLKLGGHTTERISHDSSDTTVKSKLEALPNVGTVSVTRSAPSLKSEYSWTVTFTANPGSFPIGAGNIDTLVADSTLLRGTNSQAAVVVAQQGSLPLDGTFQLSYTVGGVTQTTANLSPYDTGEG--IQRALETLSSIGGVSVSRQTNSDGYSWFITFNGCRLNPA----VCNIGDVTLLDKATTNLIGGL--SPAVPTVVVTETVKGVAPTTMLLVTDLSGGDPFQTVISSLTYGTKYYARVYWHNSVSFGYRALPVPEFVTTRNLPPGAPWPVTLVSSTATSITVVWETPTVNG-GATVSGYELWISEWAESSYRKVYDRPNDAVTLQTTLQTTADNVIESGHKYSFKVRAVNFCSSENTNAACYGAFSDPVEYTVRSPVVPDPPASLTRDSRTTINTNAANDGIAFINWTPPKDNGGSPVTSYKLFMDD 1596
BLAST of mRNA_H-elongata_contig76609.15330.1 vs. uniprot
Match: A0A0P1A7V0_PLAHL (Projectin/twitchin and related proteins n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A7V0_PLAHL) HSP 1 Score: 317 bits (811), Expect = 2.680e-92 Identity = 188/466 (40.34%), Postives = 264/466 (56.65%), Query Frame = 1
Query: 1 LTGNGADAVIYTNGVETSTERRGADASNAGNQLSGTFTLKLRGWETEA-NFNAAETEMAAALGSLPNIGSVDVTRKGPDGQLGYSWFITFIENPGSFPAGSGDVALLFPNFSDLKGEGAWCTTEEMSVGSSGLSGAFVLAFTAKLLTHRPSAI-PHSASPQTQVESSLEALDGVGNVIVARTTHTDGYTWTVSFTTCRANETSGADVCNTGDVELLFFAANGSLSGCLDGPATGSMV-VVNGSAGSS-VDVVDLSDGPPYRYYITGLEAGTVIYARISAHTLMSYGYSTLSNPEFATPSNVRPGAPAAVRLWTSSELSITLRWDHPTVDGAGEKVSGYELWMGEWATSNFRLVYDGVYDRDVTSFTVDTRWNQILESGRTYRFRVRAVNHCSSVDMSSICYGDFSESMAYTVRNPRMPSAPKQPLRDSLTNLGTSANHDAQVGLLWSAPMDNGGSEVLSYKVRFED 1386
L GNGA V+Y+ G T S GN++SG F + G TE+ +A++T + L +LPNIGSV VTR P + YSW +TF+ NPG+FP G+G++ L + S LKG + T GS L G F L++T ++T + + P+ +S ++ +LE L +G V ++R TDGY+W V+F+ CR N VCN GDV + L G T ++ V+ G A SS + V DLS G P+ I+ L GT + R++ H + +G+ T S PEF N+ PGAP V L +S+ SIT+ WD PTV+G G VSGYELW+ EWA S++R VYD D T+ T + ++ESG Y F+VRAVN CS + ++ CYG FS+ +AYTVR P +P AP RDS T + T+A +D + W P +NGGS V SYK+ +D
Sbjct: 1138 LLGNGAGIVVYSRGA---TPDPSVSVSVGGNRVSGFFKVTRGGHTTESIEHDASDTTVKKRLEALPNIGSVTVTRSAPSMKNEYSWTVTFVSNPGNFPPGAGNMDTLVADSSLLKGTNSQATVSVEQQGSLPLDGTFQLSYTEGVVTQTTANLSPYESSDG--IKRALETLPLIGGVRISRQVETDGYSWFVTFSECRLNPA----VCNIGDVNSISSIDTSLLGGLASAVPTITVTEVIKGVAPSSTLMVADLSGGDPFESVISSLTYGTTYFTRVNFHNEVGFGHRTKSVPEFVRTKNLPPGAPWPVMLVSSTATSITVAWDRPTVNG-GATVSGYELWISEWAESSYRKVYDRPNDAVTLQTTLQTTEDNVIESGHRYNFKVRAVNFCSPENTNAACYGAFSDPVAYTVRTPVVPDAPALLTRDSRTTINTNAANDGIASVNWEPPQNNGGSPVTSYKLFMDD 1593
BLAST of mRNA_H-elongata_contig76609.15330.1 vs. uniprot
Match: A0A0W8BWL6_PHYNI (Twitchin n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8BWL6_PHYNI) HSP 1 Score: 315 bits (808), Expect = 4.970e-92 Identity = 189/468 (40.38%), Postives = 269/468 (57.48%), Query Frame = 1
Query: 1 LTGNGADAVIYTNGVETSTERRGADASNAGNQLSGTFTLKLRGWETEA-NFNAAETEMAAALGSLPNIGSVDVTRKGPDGQLGYSWFITFIENPGSFPAGSGDVALLFPNFSDLKGEGAWCTTEEMSVGSSGLSGAFVLAFTAKLLTHRPSAI-PHSASPQTQVESSLEALDGVGNVIVARTTHTDGYTWTVSFTTCRANETSGADVCNTGDVELLFFAANGSLSGCLDGPATGSMVV---VNGSAGSSVDVV-DLSDGPPYRYYITGLEAGTVIYARISAHTLMSYGYSTLSNPEFATPSNVRPGAPAAVRLWTSSELSITLRWDHPTVDGAGEKVSGYELWMGEWATSNFRLVYDGVYDRDVTSFTVDTRWNQILESGRTYRFRVRAVNHCSSVDMSSICYGDFSESMAYTVRNPRMPSAPKQPLRDSLTNLGTSANHDAQVGLLWSAPMDNGGSEVLSYKVRFED 1386
L GNGA +Y+ G T S GN++SG F LKL G TE + ++++T + + L +LPN+G+V VTR P + Y W +TF NPGSFP G+G++ L + + L+G + GS L G F L++T +T + + P+ ++ +LE L +G V V+R T++DGY+W ++F CR N VCN GDV LL A + G PA ++VV V G A +++ +V DLS G P++ I+ L GT YAR+ H +S+GY L PEF T N+ PGAP V L +S+ SIT+ W+ PTV+G G VSGYELW+ EWA S++R VYD D T+ T + ++ESG Y F+VRAVN CSS + ++ CYG FS+ + YTVR+P +P P RDS T + T+A +D + W+ P DNGGS V SYK+ +D
Sbjct: 1141 LQGNGAGITVYSRGA---TPDPAVPVSVGGNRVSGYFKLKLGGHTTERISHDSSDTTVKSKLEALPNVGTVSVTRSAPSLKSEYLWTVTFTANPGSFPIGAGNIDTLVADSTLLRGTNSQAAVVVAQQGSLPLDGTFQLSYTVGGVTQTTANLSPYDTGEG--IQRALETLSSIGGVSVSRQTNSDGYSWFITFNGCRLNPA----VCNIGDVTLLDKATTNLIGGL--SPAVPTVVVTETVKGVAPTTMLLVTDLSGGDPFQTVISSLTYGTKYYARVYWHNSVSFGYRALPVPEFVTTRNLPPGAPWPVTLVSSTATSITVVWETPTVNG-GATVSGYELWISEWAESSYRKVYDRPNDAVTLQTTLQTTADNVIESGHKYSFKVRAVNFCSSENTNAACYGAFSDPVEYTVRSPVVPDPPASLTRDSRTTINTNAANDGIAFINWTPPKDNGGSPVTSYKLFMDD 1596
BLAST of mRNA_H-elongata_contig76609.15330.1 vs. uniprot
Match: D0N2H9_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N2H9_PHYIT) HSP 1 Score: 315 bits (806), Expect = 1.250e-91 Identity = 190/468 (40.60%), Postives = 272/468 (58.12%), Query Frame = 1
Query: 1 LTGNGADAVIYTNGVETSTERRGADASNAGNQLSGTFTLKLRGWETEA-NFNAAETEMAAALGSLPNIGSVDVTRKGPDGQLGYSWFITFIENPGSFPAGSGDVALLFPNFSDLKGEGAWCTTEEMSVGSSGLSGAFVLAFTAKLLTHRPSAI-PHSASPQTQVESSLEALDGVGNVIVARTTHTDGYTWTVSFTTCRANETSGADVCNTGDVELLFFAANGSLSGCLDGPATGSMVV---VNGSA-GSSVDVVDLSDGPPYRYYITGLEAGTVIYARISAHTLMSYGYSTLSNPEFATPSNVRPGAPAAVRLWTSSELSITLRWDHPTVDGAGEKVSGYELWMGEWATSNFRLVYDGVYDRDVTSFTVDTRWNQILESGRTYRFRVRAVNHCSSVDMSSICYGDFSESMAYTVRNPRMPSAPKQPLRDSLTNLGTSANHDAQVGLLWSAPMDNGGSEVLSYKVRFED 1386
L GNGA ++YT ++T S GN++SG F ++L G TE + +A++T + + L +LPN+G+V VTR P + YSW +TF NPGSFP G+G++ L + + L+G + + GS L G F L+ T +T + + P+ ++ +LE L +G V V+R T+ DG++W V+F+ CR N VCN GDV LL A + G L PA S+ V V G A +++ V DLS G P++ I+ L GT YAR+ H +S+G+ +S PEF T N+ PG P V L +S+ SIT+ W+ PTV+G G VSGYELW+ EWA S++R VYD D T+ T + ++ESG Y F+VRAVN CSS + ++ CYG FSE + YTVR+P +P P RDS T + T+A +D V + W+ P DNGGS V SYK+ +D
Sbjct: 1136 LQGNGAGILVYT---RSATPDPTVPVSVGGNRVSGYFKVQLGGHTTERISHDASDTTVKSKLEALPNVGTVSVTRSTPSLKNEYSWTVTFTANPGSFPIGAGNIDTLVADSTLLRGTNSQAAVTVVQQGSLPLDGTFKLSNTVGGVTQTTAKLSPYDTGEG--IQRALETLPSIGGVSVSRQTNNDGFSWFVTFSGCRLNPA----VCNIGDVNLLDKVATSLVGGLL--PAVPSVTVTEVVKGVAPATTLLVTDLSGGDPFQTVISSLTYGTKYYARVYWHNSVSFGHRAVSIPEFVTTKNLPPGPPWPVTLVSSTATSITVAWEAPTVNG-GATVSGYELWISEWAESSYRKVYDRPNDAVAMQTTLQTSADNVIESGHKYSFKVRAVNFCSSENTNAACYGAFSEPVEYTVRSPVVPDPPVSLTRDSRTTINTNAANDGIVFINWTPPKDNGGSPVTSYKLFMDD 1591
BLAST of mRNA_H-elongata_contig76609.15330.1 vs. uniprot
Match: A0A6A3P9D1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3P9D1_9STRA) HSP 1 Score: 314 bits (805), Expect = 1.700e-91 Identity = 196/468 (41.88%), Postives = 265/468 (56.62%), Query Frame = 1
Query: 1 LTGNGADAVIYTNGVETSTERRGA-DASNAGNQLSGTFTLKLRGWETEA-NFNAAETEMAAALGSLPNIGSVDVTRKGPDGQLGYSWFITFIENPGSFPAGSGDVALLFPNFSDLKGEGAWCTTEEMSVGSSGLSGAFVLAFTAKLLTHRPSAI-PHSASPQTQVESSLEALDGVGNVIVARTTHTDGYTWTVSFTTCRANETSGADVCNTGDVELLFFAANGSLSGCLDG--PATGSMVVVNGSA-GSSVDVVDLSDGPPYRYYITGLEAGTVIYARISAHTLMSYGYSTLSNPEFATPSNVRPGAPAAVRLWTSSELSITLRWDHPTVDGAGEKVSGYELWMGEWATSNFRLVYDGVYDRDVTSFTVDTRWNQILESGRTYRFRVRAVNHCSSVDMSSICYGDFSESMAYTVRNPRMPSAPKQPLRDSLTNLGTSANHDAQVGLLWSAPMDNGGSEVLSYKVRFED 1386
L GNGA V+Y+ G T G S GN++SG F L L G TE + +A++T M + L +LPNIG+V VTR P + YSW +TF NPGSFP GSG++ L + + LKG + + GS L G F LA+T +T + + P+ A P ++ +L+ L +G V V R T+ DGY+W V+F+ CR +CN GDV L A +L G L P G VV G A S++ V DLS G P++ I+ L GT + R+ H +S+G LS PEF T N+ PGAP V L +S+ SIT+ W+ PTV+G G VSGYELW+ EWA S++R VYD D T+ T + ++ESG Y F+VRAVN CSS + ++ CYG FSE + +TVR P +P P RDS T + T+A D + W P DNGGS V SYK+ +D
Sbjct: 1140 LQGNGAGIVVYSKGA---TPFPGVVPVSVGGNRVSGWFKLTLGGHTTERIDHDASDTTMKSKLEALPNIGTVVVTRSVPSLKNEYSWTVTFTSNPGSFPLGSGNIDTLVADSTLLKGTSSVASVVVTQQGSLPLDGTFQLAYTVSAVTQATANLSPYDAGPG--IQQALQTLPSIGGVRVTRQTNVDGYSWFVTFSGCRQTPA----ICNIGDVNTLS-AVTTNLIGGLGATVPTVGVTEVVKGVAPASTILVTDLSGGDPFQTLISSLTYGTKYFTRVYFHNSVSFGDRALSVPEFVTTRNLPPGAPWPVTLVSSTATSITVAWEAPTVNG-GATVSGYELWISEWAESSYRKVYDRPNDAVTLQTTLQTSADNVIESGHKYLFQVRAVNFCSSENTNAACYGAFSEPVEFTVRTPVVPDPPASLTRDSRTTINTNAAGDGIAYVNWEPPGDNGGSPVTSYKLYMDD 1596
BLAST of mRNA_H-elongata_contig76609.15330.1 vs. uniprot
Match: A0A8J2SQT3_9STRA (Hypothetical protein n=13 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQT3_9STRA) HSP 1 Score: 314 bits (805), Expect = 1.730e-91 Identity = 219/546 (40.11%), Postives = 281/546 (51.47%), Query Frame = 1
Query: 1 LTGNGADAVIYTNGVETSTERRGAD--ASNAGNQLSGTFTLKLRGWETEA-NFNAAETEMAAALGSLPNIGSVDVTRKGPDGQLGYSWFITFIENPGSFPAGSGDVALLFPNFSDLKGEGA------------------------------WCTTEEMSVGSSGLSGAFVLAF---TAKLLTHRPSA-----------------IPHSASPQTQVESSLEALDGVGNVIVARTTHTDGYTWTVSFTTCRANETSGADVCNTGDVELLFFAA-NGSLSGCL------DGPATGSMVVVN--------GSA-GSSVD---------VVDLSDGPPYRYYITGLEAGTVIYARISAHTLMSYGYSTLSNPEFATPSNVRPGAPAAVRLWTSSELSITLRWDHPTVDGAGEKVSGYELWMGEWATSNFRLVYDGVYDRDVTSFTVDTRWNQILESGRTYRFRVRAVNHCSSVDMSSICYGDFSESMAYTVRNPRMPSAPKQPLRDSLTNLGT-----SANHD-----AQVGLLWSAPMDNGGSEVLSYKV 1374
LTG+GA +Y +G ET+ + R AS +G +L GTFTL LR TE +NAA + M A L LPN+G+VDV R P + Y+W I+F+ NPG +PA + DVA+L P+ + L GA + E GS L G+F L F T L P A IPH ASP E++LEA++ VG+V V+R ++ DGYTW V+F C+ N G DVCN GDV L +A N +L+G DG G +N GS GS D DLS G PY Y + GL G YAR H + +G LS PE+ TPS PGAP VRL SS +S+ + WDHPT DG G V GYELWM EWA RLV+DG DVT F V TR + LESG+ YRF VRAVN+C++ D IC G+FS+ +TVRNPR P AP P + S++ G AN D QV + W AP+DNGG+ + +Y++
Sbjct: 1217 LTGSGAHLKLYADGAETAADVRHCVYCASRSGVELGGTFTLTLRRHTTEPIEYNAAASTMKARLEQLPNVGTVDVVRSAPGPRREYAWTISFVSNPGYWPANARDVAMLVPDDTTLLPLGANFSRSGVNDGVQRGTTLDRFLNNPPLYPKATVSVSERMKGSRPLQGSFQLTFCNDTRAGLYRAPRAPYPGRFWSPTECDYSGPIPHDASPAA-FEAALEAMEHVGDVEVSRASNHDGYTWFVTFGGCKTNRW-GDDVCNGGDVATLDWAQPNSTLTGGACEGDYRDGAGAGDCSGLNVTVTEVTRGSGPGSCADGPLGECVATATDLSGGAPYAYDLLGLATGERYYARARWHNDLGFGAYELSAPEYETPSWNAPGAPPPVRLVNSSSVSLAVAWDHPTTDG-GAGVMGYELWMDEWAGGRPRLVFDGTDQPDVTEFVVRTRTSVGLESGKQYRFTVRAVNYCNARDADLICRGEFSDPSVFTVRNPRAPMAPLAPRQVSMSAYGVRESLYQANSDRMFKHGQVAVEWRAPVDNGGANITAYQL 1759
BLAST of mRNA_H-elongata_contig76609.15330.1 vs. uniprot
Match: A0A6A3UQQ2_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UQQ2_9STRA) HSP 1 Score: 314 bits (804), Expect = 2.320e-91 Identity = 194/468 (41.45%), Postives = 268/468 (57.26%), Query Frame = 1
Query: 1 LTGNGADAVIYTNGVETSTERRGA-DASNAGNQLSGTFTLKLRGWETEA-NFNAAETEMAAALGSLPNIGSVDVTRKGPDGQLGYSWFITFIENPGSFPAGSGDVALLFPNFSDLKGEGAWCTTEEMSVGSSGLSGAFVLAFTAKLLTHRPSAI-PHSASPQTQVESSLEALDGVGNVIVARTTHTDGYTWTVSFTTCRANETSGADVCNTGDVELLFFAANGSLSGCLDG--PATGSMVVVNGSA-GSSVDVVDLSDGPPYRYYITGLEAGTVIYARISAHTLMSYGYSTLSNPEFATPSNVRPGAPAAVRLWTSSELSITLRWDHPTVDGAGEKVSGYELWMGEWATSNFRLVYDGVYDRDVTSFTVDTRWNQILESGRTYRFRVRAVNHCSSVDMSSICYGDFSESMAYTVRNPRMPSAPKQPLRDSLTNLGTSANHDAQVGLLWSAPMDNGGSEVLSYKVRFED 1386
L GNGA V+Y+ + +T G S GN++SG F L L G TE + +A++T M + L +LPNIG+V VTR P + YSW +TF NPGSFP GSG++ L + + LKG + + GS L G F LA+T +T + + P+ A P ++ +L+ + +G V V R T+ DGY+W V+F+ CR +CN GDV L A +L G L P G+ VV G A S++ V DLS G P++ I+ L GT + R+ H +++G TLS PEF T N+ PGAP V L +S+ SIT+ W+ PTV+G G VSGYELW+ EWA S++R VYD D T+ T + ++ESG Y F+VRAVN CSS + ++ CYG FSE + +TVR P +P P RDS T + T+A D + W P DNGGS V SYK+ +D
Sbjct: 1464 LQGNGAGIVVYS---KDATPFPGVVPVSVGGNRVSGWFKLTLGGHTTERIDHDASDTTMKSKLEALPNIGTVVVTRSVPSLKNEYSWTVTFTSNPGSFPLGSGNIDTLVADSTLLKGTSSVASVAVTQQGSLPLDGTFQLAYTVSAVTQATANLSPYDAGPG--IQQALQTIPSIGGVRVTRQTNVDGYSWFVTFSGCRQTPA----ICNIGDVNTLS-AVTTNLIGGLGAAVPTVGATEVVKGVAPASTILVTDLSGGDPFQTLISSLTYGTKYFTRVYFHNSVTFGGRTLSVPEFVTTRNLPPGAPWPVTLVSSTATSITVAWEAPTVNG-GATVSGYELWISEWAESSYRKVYDRPNDAVTLQTTLQTTADNVIESGHKYLFQVRAVNFCSSENTNAACYGAFSEPVEFTVRTPVVPDPPASLTRDSRTTINTNAAGDGIAYVNWEPPGDNGGSPVTSYKLYMDD 1920 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76609.15330.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig76609.15330.1 >prot_H-elongata_contig76609.15330.1 ID=prot_H-elongata_contig76609.15330.1|Name=mRNA_H-elongata_contig76609.15330.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=462bp LTGNGADAVIYTNGVETSTERRGADASNAGNQLSGTFTLKLRGWETEANFback to top mRNA from alignment at H-elongata_contig76609:3..2727+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig76609.15330.1 ID=mRNA_H-elongata_contig76609.15330.1|Name=mRNA_H-elongata_contig76609.15330.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2725bp|location=Sequence derived from alignment at H-elongata_contig76609:3..2727+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig76609:3..2727+ >mRNA_H-elongata_contig76609.15330.1 ID=mRNA_H-elongata_contig76609.15330.1|Name=mRNA_H-elongata_contig76609.15330.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2772bp|location=Sequence derived from alignment at H-elongata_contig76609:3..2727+ (Himanthalia elongata Himel1 dioecious)back to top |