prot_H-elongata_contig764.15315.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig764.15315.1
Unique Nameprot_H-elongata_contig764.15315.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length53
Homology
BLAST of mRNA_H-elongata_contig764.15315.1 vs. uniprot
Match: A0A6H5L333_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L333_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 3.760e-21
Identity = 41/50 (82.00%), Postives = 46/50 (92.00%), Query Frame = 0
Query:    1 MLVGADRCLGDVVSEMLSTIEDSDDPHEEAHVYLVTLFPQFSHIFSELKE 50
            MLVG DRCLGD+VSEMLSTIED+D  HEEAH+YL TLFPQF+HIFSE+KE
Sbjct:    1 MLVGTDRCLGDIVSEMLSTIEDNDKSHEEAHIYLCTLFPQFAHIFSEMKE 50          
BLAST of mRNA_H-elongata_contig764.15315.1 vs. uniprot
Match: D7FNR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR0_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 4.490e-21
Identity = 42/51 (82.35%), Postives = 49/51 (96.08%), Query Frame = 0
Query:    1 MLVGADRCLGDVVSEMLSTIEDSDDPHEEAHVYLVTLFPQFSHIFSELKEA 51
            MLVGADRCLGD+VSEML+TIED+D+ HE+AH+YL TLFPQFSHIFSE+KEA
Sbjct:  283 MLVGADRCLGDIVSEMLATIEDNDESHEDAHIYLCTLFPQFSHIFSEMKEA 333          
BLAST of mRNA_H-elongata_contig764.15315.1 vs. uniprot
Match: I2CQC4_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQC4_NANGC)

HSP 1 Score: 49.3 bits (116), Expect = 1.490e-6
Identity = 21/52 (40.38%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    2 LVGADRCLGDVVSEMLSTIEDSDDPHEEAHVYLVTLFPQFSHIFSELKEASG 53
            L+G +RC G++V+EML  +E+SDDP E      +TLFP  + ++ ++ E  G
Sbjct:    8 LMGLERCAGELVTEMLLLVEESDDPEEAEMRLALTLFPLLTDLYRQMLEGEG 59          
BLAST of mRNA_H-elongata_contig764.15315.1 vs. uniprot
Match: A0A7S2UYJ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYJ0_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 2.640e-5
Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    1 MLVGADRCLGDVVSEMLSTIEDSDDPHEEAHVYLVTLFPQFSHIFSEL 48
            +L G DRCLG++VS++L  +ED     EEA V L+ LFP+FS +F +L
Sbjct:   86 LLEGTDRCLGEIVSDVLRALEDL--AVEEAQVKLLGLFPEFSSLFQQL 131          
BLAST of mRNA_H-elongata_contig764.15315.1 vs. uniprot
Match: A0A4D9CSC2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSC2_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 7.570e-5
Identity = 20/52 (38.46%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    2 LVGADRCLGDVVSEMLSTIEDSDDPHEEAHVYLVTLFPQFSHIFSELKEASG 53
            L+G +RC G++V+EML  +E+SD+P E      +TLFP  + ++ ++ E  G
Sbjct:  246 LMGLERCAGELVTEMLLLVEESDEPEEAEMRLALTLFPLLTDLYRQMLEGEG 297          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig764.15315.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L333_9PHAE3.760e-2182.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNR0_ECTSI4.490e-2182.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
I2CQC4_NANGC1.490e-640.38Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]
A0A7S2UYJ0_9STRA2.640e-550.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A4D9CSC2_9STRA7.570e-538.46Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig764contigH-elongata_contig764:18854..19012 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig764.15315.1mRNA_H-elongata_contig764.15315.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig764 18854..19024 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig764.15315.1 ID=prot_H-elongata_contig764.15315.1|Name=mRNA_H-elongata_contig764.15315.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=53bp
MLVGADRCLGDVVSEMLSTIEDSDDPHEEAHVYLVTLFPQFSHIFSELKE
ASG
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