mRNA_H-elongata_contig76344.15310.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig76344.15310.1 vs. uniprot
Match: D7G5K7_ECTSI (RME1L2, RME1-like GTPase/ATPase without a C-terminal EH domain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K7_ECTSI) HSP 1 Score: 252 bits (643), Expect = 3.310e-77 Identity = 119/163 (73.01%), Postives = 147/163 (90.18%), Query Frame = 1
Query: 1 QVHGSLMWSMGKVFDSPEMVRVYLGSFWDRPLKHTTHRRLFESDQDALTRELTELPRLSAARKISQIIRRTNRVRAHACVLSYLREQTPWLYGMSRRRAELLENLEHVFETVREEYGLHEADMPDAAALRLNLQSFEFSSFPRLTPSTLRRLHDVVEVDIHKV 489
+V+G+LMWS+GKVFD+PE+VRVY+GSFWD+PLKHT H +LFE+DQ++LTRELT+LPRLSA RKI+Q+I+R N VRAHACVLSYLREQTPW+YG +RRR +LLEN+E V ETVR ++GLHEADMPDA ALR NLQSF+F+SFP LTP+ LR+L VV+VDIH+V
Sbjct: 234 RVYGALMWSLGKVFDNPEVVRVYIGSFWDQPLKHTAHEKLFEADQESLTRELTDLPRLSATRKINQLIKRANSVRAHACVLSYLREQTPWMYGRARRREDLLENMEGVLETVRAKHGLHEADMPDADALRANLQSFDFASFPILTPAALRQLRHVVDVDIHQV 396
BLAST of mRNA_H-elongata_contig76344.15310.1 vs. uniprot
Match: A0A6H5JAQ6_9PHAE (Dynamin-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAQ6_9PHAE) HSP 1 Score: 249 bits (635), Expect = 1.070e-76 Identity = 116/162 (71.60%), Postives = 148/162 (91.36%), Query Frame = 1
Query: 1 QVHGSLMWSMGKVFDSPEMVRVYLGSFWDRPLKHTTHRRLFESDQDALTRELTELPRLSAARKISQIIRRTNRVRAHACVLSYLREQTPWLYGMSRRRAELLENLEHVFETVREEYGLHEADMPDAAALRLNLQSFEFSSFPRLTPSTLRRLHDVVEVDIHK 486
+V+G+LMWS+GKVFD+PE+VRVY+GSFWD+PLKHT H++LFE+DQ++LTRELT+LPRLSA RKI+Q+I+RTN VRAHACVLSYLREQ PW+YG +RRR +LL+N++ V ETVR ++GLHEADMPDA ALR NLQSF+F+SFP LTP+TL++L VV+VDIH+
Sbjct: 146 RVYGTLMWSLGKVFDNPEVVRVYIGSFWDQPLKHTAHKKLFETDQESLTRELTDLPRLSATRKINQLIKRTNSVRAHACVLSYLREQMPWMYGRARRREDLLDNMDGVLETVRAKHGLHEADMPDADALRANLQSFDFASFPILTPATLQQLRHVVDVDIHQ 307
BLAST of mRNA_H-elongata_contig76344.15310.1 vs. uniprot
Match: A0A835YIA7_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA7_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.190e-44 Identity = 82/163 (50.31%), Postives = 113/163 (69.33%), Query Frame = 1
Query: 1 QVHGSLMWSMGKVFDSPEMVRVYLGSFWDRPLKHTTHRRLFESDQDALTRELTELPRLSAARKISQIIRRTNRVRAHACVLSYLREQTPWLYGMSRRRAELLENLEHVFETVREEYGLHEADMPDAAALRLNLQSFEFSSFPRLTPSTLRRLHDVVEVDIHKV 489
+V+G+LMW+MG +F +PE+VRVY+GSFWDRPLK+T H RLFE DQ AL EL LP+ SA RK+ I+ R R++AH CVL ++R Q + ELLE+L VFE VR ++GLHEAD+PD A L++ + + P L P+TL++L DVV+V+ +V
Sbjct: 185 RVYGALMWTMGTIFPNPEVVRVYVGSFWDRPLKYTAHARLFERDQTALLGELAALPKESATRKMDAIMARVKRLKAHVCVLGHIRAQA--------YKDELLEDLGGVFEEVRLKHGLHEADLPDVAKFGAVLRALDVADLPALRPATLQQLDDVVDVEFPRV 339
BLAST of mRNA_H-elongata_contig76344.15310.1 vs. uniprot
Match: B8C4H7_THAPS (Eh domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4H7_THAPS) HSP 1 Score: 144 bits (363), Expect = 1.280e-38 Identity = 71/164 (43.29%), Postives = 108/164 (65.85%), Query Frame = 1
Query: 1 QVHGSLMWSMGKVFDSPEMVRVYLGSFWDRPLKHTTHRRLFESDQDALTRELTELPRLSAARKISQIIRRTNRVRAHACVLSYLREQTPWLYGMSRRRAELLENLEHVFETVREEYGLHEADMPDAAALRLNLQSF-EFSSFPRLTPSTLRRLHDVVEVDIHKV 489
+V+GSLMWSMGK+FDSPE+VRVY GS+W+ L + +FE D+ L REL +LPR +A RK++Q++ R V+ HAC+L +R+ TP +G + R E+L LE V + VR ++ L + DMP+ A L +F +FS FP + + + RL+ ++E DI ++
Sbjct: 219 RVYGSLMWSMGKIFDSPEVVRVYTGSYWNGSLVNNDFEHMFEKDEQLLVRELVDLPRCAAERKVNQMVNRIRLVKVHACILGTVRQMTPAFFGKKKTREEILNGLETVMDNVRVKFDLSKGDMPEPAEFAKCLDTFSDFSVFPPIDNTLIDRLNRLIEEDIPEI 382
BLAST of mRNA_H-elongata_contig76344.15310.1 vs. uniprot
Match: A0A7S2PYV9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PYV9_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.000e-37 Identity = 71/164 (43.29%), Postives = 106/164 (64.63%), Query Frame = 1
Query: 1 QVHGSLMWSMGKVFDSPEMVRVYLGSFWDRPLKHTTHRRLFESDQDALTRELTELPRLSAARKISQIIRRTNRVRAHACVLSYLREQTPWLYGMSRRRAELLENLEHVFETVREEYGLHEADMPDAAALRLNLQSF-EFSSFPRLTPSTLRRLHDVVEVDIHKV 489
+V+GSLMWSMGK+FDSPE+VRVY GS+W+ L + ++F D+ L REL +LPR +A RK++Q++ R V+ H C+L +R TP +G R R ++L L+ + + VR E+ L + DMPDA NL F +FS FP + S +++L +VE DI ++
Sbjct: 324 RVYGSLMWSMGKIFDSPEVVRVYTGSYWNGNLINNDFEKMFTKDEKLLVRELIDLPRCAAERKVNQMVNRIRLVKVHICILGTIRNMTPRFFGKKRSREQILAELDVILDNVRVEFNLSKGDMPDAKEFAANLNKFHDFSVFPPINRSLIKKLDSLVEKDIPEI 487
BLAST of mRNA_H-elongata_contig76344.15310.1 vs. uniprot
Match: A0A0C2G4C5_9BILA (DUF5600 domain-containing protein n=1 Tax=Ancylostoma duodenale TaxID=51022 RepID=A0A0C2G4C5_9BILA) HSP 1 Score: 137 bits (344), Expect = 2.310e-37 Identity = 64/163 (39.26%), Postives = 108/163 (66.26%), Query Frame = 1
Query: 1 QVHGSLMWSMGKVFDSPEMVRVYLGSFWDRPLKHTTHRRLFESDQDALTRELTELPRLSAARKISQIIRRTNRVRAHACVLSYLREQTPWLYGMSRRRAELLENLEHVFETVREEYGLHEADMPDAAALRLNLQSFEFSSFPRLTPSTLRRLHDVVEVDIHKV 489
+V+G+LMWS+GKVF +PE+ RVY+G+FWD PL + +RRLF+ +Q L ++L LPR +A RK++ +I+R + HA ++S LR+Q P + G +++ EL++NL+ +FE ++ E+ + D PD +R LQ+ +F+ F L P L + ++ DI ++
Sbjct: 9 RVYGALMWSLGKVFKTPEVSRVYIGTFWDHPLHYDINRRLFQDEQHDLFQDLQALPRNAALRKLNDLIKRARLAKVHAFIISELRKQMPSMIGREKKKKELIQNLDKIFEQLQREHNISPGDFPDVNKMREKLQNHDFTKFNPLKPKLLEIVDGMLASDIARL 171
BLAST of mRNA_H-elongata_contig76344.15310.1 vs. uniprot
Match: A0A077ZBA9_TRITR (Protein rme isoform c protein rme isoform b pro tein rme isoform a n=2 Tax=Trichuris TaxID=36086 RepID=A0A077ZBA9_TRITR) HSP 1 Score: 142 bits (357), Expect = 1.090e-36 Identity = 66/163 (40.49%), Postives = 106/163 (65.03%), Query Frame = 1
Query: 1 QVHGSLMWSMGKVFDSPEMVRVYLGSFWDRPLKHTTHRRLFESDQDALTRELTELPRLSAARKISQIIRRTNRVRAHACVLSYLREQTPWLYGMSRRRAELLENLEHVFETVREEYGLHEADMPDAAALRLNLQSFEFSSFPRLTPSTLRRLHDVVEVDIHKV 489
+V+G+LMWS+GKVF +PE+ RVY+GSFWD+PL H +RRLFE +Q L +L LPR +A RK++ +I+R + HA ++SYLR P + G +R+ EL++NL+ ++E ++ E+ + D PD ++ LQ +FS F L P + + ++ DI ++
Sbjct: 241 RVYGALMWSLGKVFRTPEVARVYIGSFWDQPLHHDINRRLFEDEQHDLFIDLQSLPRNAALRKLNDLIKRARLAKVHAYIISYLRRDMPSMMGKEKRKKELIQNLDKIYEQLQREHNISPGDFPDLKRMQEQLQHHDFSKFNSLKPKLIEMVDGMLSSDIARL 403
BLAST of mRNA_H-elongata_contig76344.15310.1 vs. uniprot
Match: A0A7S2KM23_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KM23_9STRA) HSP 1 Score: 140 bits (353), Expect = 2.190e-36 Identity = 65/160 (40.62%), Postives = 102/160 (63.75%), Query Frame = 1
Query: 1 QVHGSLMWSMGKVFDSPEMVRVYLGSFWDRPLKHTTHRRLFESDQDALTRELTELPRLSAARKISQIIRRTNRVRAHACVLSYLREQTPWLYGMSRRRAELLENLEHVFETVREEYGLHEADMPDAAALRLNLQSFEFSSFPRLTPSTLRRLHDVVEVDI 480
+V+GSL+WSMGK+F +PE+ RVY GSFWD+PL H + +FE D++ L EL LP +AARK++++++R ++ H C+L +L+ Q P L+G + + L++NL V + V+ Y L + DMP+ L L++ F SFP L + L+ + E DI
Sbjct: 265 RVYGSLLWSMGKIFQTPEVARVYCGSFWDQPLLHEDFKDMFERDEELLIEELMNLPASAAARKVNEVVKRIRAIKVHLCILGHLKRQMPLLFGREKTQMNLIKNLPSVLKEVKTIYDLSDGDMPNVNVLASKLRASNFQSFPTLDSKIIYELNAMTEHDI 424
BLAST of mRNA_H-elongata_contig76344.15310.1 vs. uniprot
Match: A0A7S1U175_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U175_9STRA) HSP 1 Score: 140 bits (352), Expect = 4.320e-36 Identity = 58/160 (36.25%), Postives = 109/160 (68.12%), Query Frame = 1
Query: 1 QVHGSLMWSMGKVFDSPEMVRVYLGSFWDRPLKHTTHRRLFESDQDALTRELTELPRLSAARKISQIIRRTNRVRAHACVLSYLREQTPWLYGMSRRRAELLENLEHVFETVREEYGLHEADMPDAAALRLNLQSFEFSSFPRLTPSTLRRLHDVVEVDI 480
+V+G+L++++GK+ +PE+VRV++GSFWD+PL+H+ H+ +F+ D +L +E+ LP +A+RK+ ++++R V+ HAC+L +LR + PW +G R+ ++++NL+ +F+ V+++YGL D P L++F+F P L S L L ++++ I
Sbjct: 255 RVYGALLFNIGKILQTPEVVRVFIGSFWDKPLQHSDHKAIFDRDAQSLMKEIEGLPADAASRKVDEMVKRVRLVKVHACILGHLRSKMPWFWGSEARKEQIIDNLDIIFDEVQQKYGLSAGDFPKTEEFATCLKTFDFRKLPTLEYSALETLQELLDKKI 414
BLAST of mRNA_H-elongata_contig76344.15310.1 vs. uniprot
Match: A0A6V7UEY6_9BILA (Hypothetical protein n=4 Tax=Meloidogyne TaxID=189290 RepID=A0A6V7UEY6_9BILA) HSP 1 Score: 140 bits (353), Expect = 4.810e-36 Identity = 65/163 (39.88%), Postives = 110/163 (67.48%), Query Frame = 1
Query: 1 QVHGSLMWSMGKVFDSPEMVRVYLGSFWDRPLKHTTHRRLFESDQDALTRELTELPRLSAARKISQIIRRTNRVRAHACVLSYLREQTPWLYGMSRRRAELLENLEHVFETVREEYGLHEADMPDAAALRLNLQSFEFSSFPRLTPSTLRRLHDVVEVDIHKV 489
+V+G+LMWS+GKVF +PE+ RVY+G+FWD PL + +RRLF+ +Q L +L LPR + RK++ +I+R + HA ++S LR+Q P + G +++ EL++ L+ +FE +++E+G+ D PD +R NL++ +FS F L P L+ + D++ DI ++
Sbjct: 232 RVYGALMWSLGKVFKTPEVARVYIGTFWDHPLHYDINRRLFQDEQHDLFADLQSLPRNAVLRKLNDLIKRARLAKVHAYIISELRKQMPSMIGKEKKKKELIQKLDKLFEQLQKEHGISPGDFPDINKMRANLENADFSRFNALKPRLLQIVDDMLAKDIARL 394 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76344.15310.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig76344.15310.1 >prot_H-elongata_contig76344.15310.1 ID=prot_H-elongata_contig76344.15310.1|Name=mRNA_H-elongata_contig76344.15310.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp MWSMGKVFDSPEMVRVYLGSFWDRPLKHTTHRRLFESDQDALTRELTELPback to top mRNA from alignment at H-elongata_contig76344:244..2737- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig76344.15310.1 ID=mRNA_H-elongata_contig76344.15310.1|Name=mRNA_H-elongata_contig76344.15310.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2494bp|location=Sequence derived from alignment at H-elongata_contig76344:244..2737- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig76344:244..2737- >mRNA_H-elongata_contig76344.15310.1 ID=mRNA_H-elongata_contig76344.15310.1|Name=mRNA_H-elongata_contig76344.15310.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=942bp|location=Sequence derived from alignment at H-elongata_contig76344:244..2737- (Himanthalia elongata Himel1 dioecious)back to top |