mRNA_H-elongata_contig76297.15307.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig76297.15307.1 vs. uniprot
Match: A0A6H5JY30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY30_9PHAE) HSP 1 Score: 144 bits (362), Expect = 4.050e-40 Identity = 74/143 (51.75%), Postives = 101/143 (70.63%), Query Frame = 1
Query: 160 DVVASPSLVESTRE---PLYFTALNFYQARDGRPGVAYPWLKDFKVIEPHHETSLTVTNPRDGFGYRWEVHAGGSSSDIVLVSAMGVSTVAVLTKLDENVITLEEVDEEGKVSRRLEETVMVKYVRREIRSLTEEDQNELLDA 579
D+V S + T E PL F ALNFY RDG+P YPWL+D K+IEPH ET+++V++PRDG+ Y WEV +G + + V SA G + LT LD+NVITL+EV+ +G++ R+L+E VMVKYVRREIR+LT+ ++ EL A
Sbjct: 42 DIVTSSAETTGTVEEVAPLSFQALNFYHIRDGKPAQDYPWLQDVKLIEPHRETTMSVSSPRDGYDYIWEVRSGDTDNTKVRASARGAVVLITLTILDDNVITLKEVNSDGEIMRQLDELVMVKYVRREIRTLTDNEREELFHA 184
BLAST of mRNA_H-elongata_contig76297.15307.1 vs. uniprot
Match: A0A6H5J7R8_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R8_9PHAE) HSP 1 Score: 152 bits (383), Expect = 3.110e-39 Identity = 90/206 (43.69%), Postives = 123/206 (59.71%), Query Frame = 1
Query: 22 RWIGLAVVAGLVLATMMAIASDG----------DKPRG---FQAETVSLAEITSEVRATDVVASPSL------VESTREPLYFTALNFYQARDGRPGVAYPWLKDFKVIEPHHETSLTVTNPRDGFGYRWEVHAGGSSSDIVLVSAMGVSTVAVLTKLDENVITLEEVDEE-GKVSRRLEETVMVKYVRREIRSLTEEDQNELLDA 579
RW+ AVV L + M+A+A G + R +A ++ + + V+A D A+ + V + PL F A NFY RDG+P + YPWLK+ K+IEPH ET+ TV++PRDGF YRW V + D + A G TV +LT LD+ +I LEEV+ E G V+RRLEE VMVKYVRRE+R+LT+E++ EL DA
Sbjct: 49 RWLSFAVVGTLAVGVMVALAQAGYHLPSATTTLETARTESMIEASGIARSSGSGSVKANDTPAAVKVHHSRPGVATELAPLSFEATNFYHIRDGKPALDYPWLKEVKLIEPHRETTFTVSSPRDGFEYRWTVRGADADKDDLRAEASGAETVMILTVLDDTIIDLEEVNTETGVVARRLEEKVMVKYVRRELRTLTDEEREELFDA 254
BLAST of mRNA_H-elongata_contig76297.15307.1 vs. uniprot
Match: D8LC28_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC28_ECTSI) HSP 1 Score: 149 bits (375), Expect = 3.290e-38 Identity = 83/139 (59.71%), Postives = 99/139 (71.22%), Query Frame = 1
Query: 199 EPLYFTALNFYQARDGRPGVAYPWLKDFKVIEPHHETSLTVTNPRDGFGYRWEVH-----------AGGSSSDIVLVSAMGVSTVAVLTKLDENVITLEEVD-EEGKVSRRLEETVMVKYVRREIRSLTEEDQNELLDA 579
+ L FTALNFY RDG+PG YPWLKDFK++EPH ET+L V PR+GF YRW+V +GG SS I A G VLT L+EN+ITLEEV+ +GKV RRLEETVMVKYVRREIRSLT++++ ELLDA
Sbjct: 110 QALAFTALNFYHVRDGKPGQDYPWLKDFKLVEPHRETTLAVEAPREGFEYRWDVRPTCTGDSCTSSSGGESSPI---QAAGAVAEVVLTSLEENMITLEEVNVADGKVVRRLEETVMVKYVRREIRSLTDDEREELLDA 245
BLAST of mRNA_H-elongata_contig76297.15307.1 vs. uniprot
Match: A0A6H5JRR4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRR4_9PHAE) HSP 1 Score: 147 bits (372), Expect = 9.620e-38 Identity = 72/126 (57.14%), Postives = 95/126 (75.40%), Query Frame = 1
Query: 202 PLYFTALNFYQARDGRPGVAYPWLKDFKVIEPHHETSLTVTNPRDGFGYRWEVHAGGSSSDIVLVSAMGVSTVAVLTKLDENVITLEEVDEEGKVSRRLEETVMVKYVRREIRSLTEEDQNELLDA 579
PL F ALNFY RDG+P YPWL+D K+IEPH ET+LTV++PRDG+ Y WEV +G + V SA G + LT LD+NVITL+EV+ +G++ R+L+E VMVKYVRREIR+LT++++ EL DA
Sbjct: 126 PLAFQALNFYHIRDGKPAQDYPWLQDVKLIEPHRETTLTVSSPRDGYDYIWEVRSGDTDDTEVRASARGAEALITLTILDDNVITLKEVNSDGEIMRQLDELVMVKYVRREIRTLTDDEREELFDA 251
BLAST of mRNA_H-elongata_contig76297.15307.1 vs. uniprot
Match: D8LC46_ECTSI (Tyrosinase_Cu-bd domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LC46_ECTSI) HSP 1 Score: 146 bits (369), Expect = 2.720e-37 Identity = 73/125 (58.40%), Postives = 90/125 (72.00%), Query Frame = 1
Query: 205 LYFTALNFYQARDGRPGVAYPWLKDFKVIEPHHETSLTVTNPRDGFGYRWEVHAGGSSSDIVLVSAMGVSTVAVLTKLDENVITLEEVDEEGKVSRRLEETVMVKYVRREIRSLTEEDQNELLDA 579
L F A NFYQ RDG+P YPWLKD K+IEPH ET+ TV++PRDGF YRW V AG ++ + A G + VLT LDEN + LEEVD +G V RR +E VMVKYVRREIR+LT++++ EL DA
Sbjct: 166 LSFEATNFYQLRDGKPAQDYPWLKDVKLIEPHRETTFTVSSPRDGFDYRWRVFAGSAAEGELCTEATGPESTVVLTTLDENEVVLEEVDADGTVVRRRQEKVMVKYVRREIRTLTDDEREELFDA 290
BLAST of mRNA_H-elongata_contig76297.15307.1 vs. uniprot
Match: A0A6H5K485_9PHAE (TYR protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K485_9PHAE) HSP 1 Score: 146 bits (368), Expect = 3.760e-37 Identity = 73/126 (57.94%), Postives = 93/126 (73.81%), Query Frame = 1
Query: 202 PLYFTALNFYQARDGRPGVAYPWLKDFKVIEPHHETSLTVTNPRDGFGYRWEVHAGGSSSDIVLVSAMGVSTVAVLTKLDENVITLEEVDEEGKVSRRLEETVMVKYVRREIRSLTEEDQNELLDA 579
PL F ALNFY RDG+P YPWLK K+IEPH ET+L+V++PRDG Y WEV AG + ++ +A G V LT LD+NVIT++EV +G + RRL+E VMVKYVRREIR+LT+E++ ELLDA
Sbjct: 120 PLSFQALNFYHIRDGKPAQDYPWLKGVKLIEPHRETTLSVSSPRDGHDYIWEVRAGETDEANLVATARGAEAVVTLTTLDDNVITVKEVHPDGHIVRRLDEVVMVKYVRREIRTLTDEEREELLDA 245
BLAST of mRNA_H-elongata_contig76297.15307.1 vs. uniprot
Match: D7FW00_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW00_ECTSI) HSP 1 Score: 142 bits (358), Expect = 6.320e-36 Identity = 70/126 (55.56%), Postives = 95/126 (75.40%), Query Frame = 1
Query: 202 PLYFTALNFYQARDGRPGVAYPWLKDFKVIEPHHETSLTVTNPRDGFGYRWEVHAGGSSSDIVLVSAMGVSTVAVLTKLDENVITLEEVDEEGKVSRRLEETVMVKYVRREIRSLTEEDQNELLDA 579
PL F ALNFY RDG+P Y WL+D K+IEPH ET+L V++PRDG+ Y WEVHAG + ++ +A G V LT LD+++IT++EV +G++ R+L+E VMVKYVRREIR+LT+E++ ELLDA
Sbjct: 92 PLSFEALNFYHIRDGKPAQDYTWLRDVKLIEPHRETTLLVSSPRDGYDYIWEVHAGETDEGDLIATASGAEAVVTLTVLDDSMITVKEVLPDGEIVRQLDEMVMVKYVRREIRTLTDEERVELLDA 217
BLAST of mRNA_H-elongata_contig76297.15307.1 vs. uniprot
Match: A0A6H5J676_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J676_9PHAE) HSP 1 Score: 137 bits (346), Expect = 3.410e-34 Identity = 76/138 (55.07%), Postives = 97/138 (70.29%), Query Frame = 1
Query: 175 PSLVESTREPLYFTALNFYQARDGRPGVAYPWLKDFKVIEPHHETSLTVTNPRDGFGYRWEVHAGGSSSDIVLVSAMGVSTVAVLTK--LDENVITLEEVD-EEGKVSRRLEETVMVKYVRREIRSLTEEDQNELLDA 579
P L + PL F A NFY RDG+P YPWL+D K++EPH ET+L+V +PR+GF YRW + GGSS+ V +A G V VL L+EN++TLEEV+ G V+RRL+E VMVKYVRREIR+LT E++ ELLDA
Sbjct: 96 PGLATTAPPPLAFHARNFYHVRDGKPASDYPWLRDVKLVEPHRETTLSVDDPREGFEYRWLIR-GGSSASKVHTAASGAEAVVVLEAKHLEENLVTLEEVEIATGAVARRLDEFVMVKYVRREIRTLTYEEREELLDA 232
BLAST of mRNA_H-elongata_contig76297.15307.1 vs. uniprot
Match: D8LC42_ECTSI (TYRosinase family member (Tyr-4) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC42_ECTSI) HSP 1 Score: 135 bits (339), Expect = 3.070e-33 Identity = 75/143 (52.45%), Postives = 93/143 (65.03%), Query Frame = 1
Query: 202 PLYFTALNFYQARDGRPGVAYPWLKDFKVIEPHHETSLTVTNPRDGFGYRWEVHAGGSSS----------------DIVLVSAMGVSTVAVLTKLDENVITLEEVDEE-GKVSRRLEETVMVKYVRREIRSLTEEDQNELLDA 579
PL FTALNFY RDG+P YPWLKD K+IEPH ET+L V PRDGF YRW+V G S + V+ +A G V V T L EN ++LEEV+ + G V+RRL+E VMVKYVRREIR+LT++++ EL DA
Sbjct: 132 PLSFTALNFYHVRDGKPAQDYPWLKDVKLIEPHRETTLDVETPRDGFEYRWKVLLGAPVSITDSAPASSFEEEGVTEEVVATASGAEAVVVFTHLGENSVSLEEVNSDTGVVTRRLQEKVMVKYVRREIRTLTDDEREELFDA 274
BLAST of mRNA_H-elongata_contig76297.15307.1 vs. uniprot
Match: D7G9A4_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9A4_ECTSI) HSP 1 Score: 121 bits (304), Expect = 1.430e-28 Identity = 60/106 (56.60%), Postives = 81/106 (76.42%), Query Frame = 1
Query: 262 YPWLKDFKVIEPHHETSLTVTNPRDGFGYRWEVHAGGSSSDIVLVSAMGVSTVAVLTKLDENVITLEEVDEEGKVSRRLEETVMVKYVRREIRSLTEEDQNELLDA 579
YPWL+D K+IEPH ET L V++PRDG+ Y WEV AG + ++ +A G V LT LDEN+IT++EV +G++ R+L+E VMVKYVRREIR+LT+E++ ELLDA
Sbjct: 110 YPWLRDVKLIEPHRETILAVSSPRDGYDYIWEVRAGETDEADLIATASGAEAVVTLTVLDENMITVKEVHPDGEIVRQLDEMVMVKYVRREIRTLTDEERVELLDA 215 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76297.15307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig76297.15307.1 >prot_H-elongata_contig76297.15307.1 ID=prot_H-elongata_contig76297.15307.1|Name=mRNA_H-elongata_contig76297.15307.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=192bp MRGGIVRWIGLAVVAGLVLATMMAIASDGDKPRGFQAETVSLAEITSEVRback to top mRNA from alignment at H-elongata_contig76297:1255..1833+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig76297.15307.1 ID=mRNA_H-elongata_contig76297.15307.1|Name=mRNA_H-elongata_contig76297.15307.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=579bp|location=Sequence derived from alignment at H-elongata_contig76297:1255..1833+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig76297:1255..1833+ >mRNA_H-elongata_contig76297.15307.1 ID=mRNA_H-elongata_contig76297.15307.1|Name=mRNA_H-elongata_contig76297.15307.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1152bp|location=Sequence derived from alignment at H-elongata_contig76297:1255..1833+ (Himanthalia elongata Himel1 dioecious)back to top |