prot_H-elongata_contig76246.15303.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig76246.15303.1
Unique Nameprot_H-elongata_contig76246.15303.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
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BLAST of mRNA_H-elongata_contig76246.15303.1 vs. uniprot
Match: D8LU30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU30_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 1.250e-6
Identity = 28/51 (54.90%), Postives = 35/51 (68.63%), Query Frame = 0 
Query:    1 PVALAAAGGSAQLVSELIRAEVPYRTRDDAGRTPLHHAARYGNISVLRVLV 51
            P+ALAAA GSAQ+VSEL+RA++PYRTRD              ++ VLRVLV
Sbjct:  580 PIALAAASGSAQVVSELVRADIPYRTRDRDXXXXXXXXXXXXHVPVLRVLV 630
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76246.15303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LU30_ECTSI1.250e-654.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 1..51
e-value: 1.6E-7
score: 31.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..52
score: 16.52
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..52
e-value: 1.5E-11
score: 46.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..51
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 30..52
score: 11.514

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig76246contigH-elongata_contig76246:103..258 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig76246.15303.1mRNA_H-elongata_contig76246.15303.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig76246 103..258 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig76246.15303.1 ID=prot_H-elongata_contig76246.15303.1|Name=mRNA_H-elongata_contig76246.15303.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
PVALAAAGGSAQLVSELIRAEVPYRTRDDAGRTPLHHAARYGNISVLRVL
VA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt