prot_H-elongata_contig76182.15297.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig76182.15297.1
Unique Nameprot_H-elongata_contig76182.15297.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length319
Homology
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BLAST of mRNA_H-elongata_contig76182.15297.1 vs. uniprot
Match: A0A6H5K6L4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L4_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 1.950e-30
Identity = 128/320 (40.00%), Postives = 155/320 (48.44%), Query Frame = 0 
Query:    1 MPCQILVRRLADLVHSCTTRGGKRPLALDVLVGGVDHREGPTLHRVQATGAFQRYKAFAAGXXXXXXXARLAADTWATTPTTTARTA--EGMDREGSEDCPAVFGSDRSPSGDVEVGAGHDSTRENWQEESGGEGSDXXXXXXXARYANMIKXXXXXXXXXXXXXXXXXXXXXXXSLYRTRRRRLWTEAGGGEGEPPLTPEHREAFKRAFLSMWDPDVEDDDDGSSTPFTGVVEEGQEPKSRDA-TYGGLRASELSATVYGTR----VSSASNEFGWDEG-------AGLELDREDEKRYEGFECSTSEVEAILVELDEE 306
            MPCQIL RRLADL+HSCTTRGGKRPLA+D+LVGGVD   G +LHRVQATGAFQRY+AFAAGXXXXXXX                     +G+ +   +  P         SG+   G   D+T  +    S GE          A  A    XXXXXXXXXX                             G+G   L PEHR A KRA  ++W+P                   G+E   R+A T GGLRA+EL+ATVYG +    V S   E G  E        AGL     +    +G  CS  E+E+IL+EL+ E
Sbjct:    1 MPCQILSRRLADLIHSCTTRGGKRPLAVDILVGGVDDHAGASLHRVQATGAFQRYRAFAAGXXXXXXXXXXXXXXXXXXDAREVXXXXXDGLRQASDDAVPGYL------SGETRQGVPVDATTTSADGASSGEDGGRGDAEDSATVAXXXXXXXXXXXXXX----------------------XXXXXXXGQGRGTLAPEHRAALKRAVAALWEP-AGGXXXXXXXXXXXXSAGGEERHGREAATRGGLRAAELTATVYGIQRQASVESPKEERGGGESLGDPVGDAGLGGGEGEGAWEQGVGCSREEMESILLELEAE 291
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BLAST of mRNA_H-elongata_contig76182.15297.1 vs. uniprot
Match: D8LGQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGQ0_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 1.640e-9
Identity = 27/33 (81.82%), Postives = 31/33 (93.94%), Query Frame = 0 
Query:    1 MPCQILVRRLADLVHSCTTRGGKRPLALDVLVG 33
            MPC +L RRLADL+HSCTTRGGKRPLA+D+LVG
Sbjct:    1 MPCPMLSRRLADLIHSCTTRGGKRPLAVDILVG 33
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76182.15297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K6L4_9PHAE1.950e-3040.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGQ0_ECTSI1.640e-981.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 1..90
e-value: 7.1E-14
score: 53.5
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 1..72
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 1..69
e-value: 1.3E-11
score: 44.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig76182contigH-elongata_contig76182:603..2458 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig76182.15297.1mRNA_H-elongata_contig76182.15297.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig76182 523..2768 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig76182.15297.1 ID=prot_H-elongata_contig76182.15297.1|Name=mRNA_H-elongata_contig76182.15297.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=319bp
MPCQILVRRLADLVHSCTTRGGKRPLALDVLVGGVDHREGPTLHRVQATG
AFQRYKAFAAGGGGAAASARLAADTWATTPTTTARTAEGMDREGSEDCPA
VFGSDRSPSGDVEVGAGHDSTRENWQEESGGEGSDSDDDEGEARYANMIK
EEEEDEVAAVKPAPAQAAAKKQRSLYRTRRRRLWTEAGGGEGEPPLTPEH
REAFKRAFLSMWDPDVEDDDDGSSTPFTGVVEEGQEPKSRDATYGGLRAS
ELSATVYGTRVSSASNEFGWDEGAGLELDREDEKRYEGFECSTSEVEAIL
VELDEEQRDAKKNRRGRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029055Ntn_hydrolases_N
IPR001353Proteasome_sua/b