mRNA_H-elongata_contig76156.15296.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig76156.15296.1 vs. uniprot
Match: D8LUD2_ECTSI (DRMBL domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUD2_ECTSI) HSP 1 Score: 208 bits (529), Expect = 3.720e-61 Identity = 98/126 (77.78%), Postives = 110/126 (87.30%), Query Frame = 1
Query: 1 ADHTTGLYKSFSAGTIYASQGTARLITELMGVNAERVVGLPMNQPVMVAGFELTLVDANHCPAAVMFLIRDPRPGGRISLHTGDFRADESVCANPMVTALRGRVDTLYLDTTYCAPRHTFPTQCVV 378
+DHTTGLYKSFSAG IY S GTA LI ELMGVN ERVV LPM+ PV+VAGF+LTL+DANHCPAAVMF+IRDPRPGGR +LHTGDFRA ESVC NP+V +L+GR+D+LYLDTTYC PRHTFP Q V
Sbjct: 38 SDHTTGLYKSFSAGKIYCSHGTANLIVELMGVNRERVVALPMDTPVLVAGFDLTLIDANHCPAAVMFVIRDPRPGGRTTLHTGDFRAAESVCRNPVVKSLKGRLDSLYLDTTYCGPRHTFPDQSEV 163
BLAST of mRNA_H-elongata_contig76156.15296.1 vs. uniprot
Match: A0A8J5XFD5_DIALT (SWIM-type domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XFD5_DIALT) HSP 1 Score: 127 bits (320), Expect = 1.070e-31 Identity = 69/127 (54.33%), Postives = 84/127 (66.14%), Query Frame = 1
Query: 4 DHTTGLYKSFSAGTIYASQGTARLITELMGVNAERVVGLPMNQPVMVAGFELTLVDANHCPAAVMFLIRDPRPGGRISLHTGDFRADESVCANPMVTAL--RGRVDTLYLDTTYCAPRHTFPTQCVV 378
DHT GL SF AGTIY SQ TA L+ + V+A+RVV L +++ +V G E+T DANHCP AV R+PR G +LHTGDFRA+ VC +P + L G VDTL+LDTTYCAPR FP Q V
Sbjct: 42 DHTVGLNASFCAGTIYCSQITANLVIAVGLVDAKRVVALALDETSLVDGVEVTPFDANHCPGAVCLHFRNPRTGAT-ALHTGDFRAERCVCESPTLARLLAAGPVDTLFLDTTYCAPRWRFPAQAAV 167
BLAST of mRNA_H-elongata_contig76156.15296.1 vs. uniprot
Match: A0A1Y1HYN4_KLENI (Putative DNA repair metallo-beta-lactamase family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HYN4_KLENI) HSP 1 Score: 121 bits (304), Expect = 1.520e-29 Identity = 63/127 (49.61%), Postives = 87/127 (68.50%), Query Frame = 1
Query: 1 ADHTTGLYKSFSAGTIYASQGTARLITELMGVNAERVVGLPMNQPVMVAGFELTLVDANHCPAAVMFLIRDPRPGGR---ISLHTGDFRADESVCANPMVTALRGR-VDTLYLDTTYCAPRHTFPTQ 369
+DHT GLY+SF++GTI+ S+ TA L+ MG+ ++ + LPM++ V + G E+T +DANHCP +VM L + P GGR + LHTGDFR E + P +LR +DT+YLDTTY PRHTFP+Q
Sbjct: 38 SDHTIGLYRSFNSGTIFCSRITAALLINCMGLRSDCIQVLPMDKTVTIDGVEVTALDANHCPGSVMLLFKVPGHGGRPAQVILHTGDFRYHERMADYP---SLRNTLIDTIYLDTTYAYPRHTFPSQ 161
BLAST of mRNA_H-elongata_contig76156.15296.1 vs. uniprot
Match: I0YMI9_COCSC (DRMBL-domain-containing protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YMI9_COCSC) HSP 1 Score: 117 bits (293), Expect = 1.940e-29 Identity = 62/129 (48.06%), Postives = 84/129 (65.12%), Query Frame = 1
Query: 1 ADHTTGLYKSFSAGTIYASQGTARLITELMGVNAERVVGLPMNQPVMVAGFELTLVDANHCPAAVMFLIRDPRPGG-----RISLHTGDFRADESVCANPMVTALRG-RVDTLYLDTTYCAPRHTFPTQ 369
+DHTTGL SFS+GTIY S TA L+ + M +N + LP+N P++V G +TL+DANHCP AV+FL + P P G ++ LHTGD R + +P AL+ R+D L+LDTTY +P+H FP Q
Sbjct: 28 SDHTTGLTTSFSSGTIYCSAVTANLLVKDMHINPSCIQPLPLNIPLLVDGINVTLIDANHCPGAVLFLFKTPPPPGSEFSEQVILHTGDMRWHPRMGRHP---ALKNQRIDMLFLDTTYASPKHVFPCQ 153
BLAST of mRNA_H-elongata_contig76156.15296.1 vs. uniprot
Match: A0A8J4FA51_9CHLO (Lactamase_B domain-containing protein (Fragment) n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4FA51_9CHLO) HSP 1 Score: 120 bits (301), Expect = 3.780e-29 Identity = 64/123 (52.03%), Postives = 81/123 (65.85%), Query Frame = 1
Query: 1 ADHTTGLYKSFSAGTIYASQGTARLITELMGVNAERVVGLPMNQPVMVAGFELTLVDANHCPAAVMFLIRDPRPGGRISLHTGDFRADESVCANPMVTALRGRVDTLYLDTTYCAPRHTFPTQ 369
+DH +GL ++ G IY S+ TARL+ L GV+ + LPM QPVMVAG E+TLVDANHCP AV L R P G R LH GD R S+ + P++ A RG + ++LDTTYC P+HTFP Q
Sbjct: 41 SDHYSGLNDNWCNGPIYCSETTARLVVHLCGVDPSHLRPLPMKQPVMVAGVEVTLVDANHCPGAVQLLFRLPGSGARY-LHCGDMRFCASMTSCPLLGAWRG-CEAVFLDTTYCHPKHTFPLQ 161
BLAST of mRNA_H-elongata_contig76156.15296.1 vs. uniprot
Match: A0A8J4GQX1_9CHLO (Lactamase_B domain-containing protein (Fragment) n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GQX1_9CHLO) HSP 1 Score: 119 bits (297), Expect = 1.330e-28 Identity = 64/123 (52.03%), Postives = 80/123 (65.04%), Query Frame = 1
Query: 1 ADHTTGLYKSFSAGTIYASQGTARLITELMGVNAERVVGLPMNQPVMVAGFELTLVDANHCPAAVMFLIRDPRPGGRISLHTGDFRADESVCANPMVTALRGRVDTLYLDTTYCAPRHTFPTQ 369
+DH +GL ++ G IY S+ TARL+ L GV+ + LPM QPVMVAG E+TLV ANHCP AV L R P G R LH GD R S+ + P++ A RG D ++LDTTYC P+HTFP Q
Sbjct: 41 SDHYSGLTDNWCNGPIYCSEITARLVVHLCGVDPSHLRPLPMKQPVMVAGVEVTLVGANHCPGAVQLLFRLPGSGARY-LHCGDMRFCSSMTSCPLLGAWRG-CDAVFLDTTYCHPKHTFPLQ 161
BLAST of mRNA_H-elongata_contig76156.15296.1 vs. uniprot
Match: A0A087SIS5_AUXPR (DNA cross-link repair 1 protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SIS5_AUXPR) HSP 1 Score: 113 bits (282), Expect = 1.740e-28 Identity = 69/127 (54.33%), Postives = 79/127 (62.20%), Query Frame = 1
Query: 4 DHTTGLYKSFSAGTIYASQGTARLITELMGVNAERVVGLPMNQPVMVAGFELTLVDANHCPAAVMFLIRDPRPGG----RISLHTGDFRADE-SVCANPMVTALRGRVDTLYLDTTYCAPRHTFPTQ 369
DHTTGL K F AGTIY S TARL+ MG+ A V L + V V G +T + ANHCP AVMFL P GG R LHTGD R D+ ++ A P + AL G +DTL LDTTYCAPR TFP Q
Sbjct: 39 DHTTGLTKGFDAGTIYCSPVTARLLIRDMGLRAGVVCPLSPHVTVEVGGVAVTPLPANHCPGAVMFLFVIPGDGGGRPPRTVLHTGDMRWDDGAMMAYPALRAL-GTLDTLVLDTTYCAPRWTFPPQ 164
BLAST of mRNA_H-elongata_contig76156.15296.1 vs. uniprot
Match: A0A507EAU8_9FUNG (Lactamase_B domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EAU8_9FUNG) HSP 1 Score: 118 bits (295), Expect = 2.370e-28 Identity = 60/123 (48.78%), Postives = 78/123 (63.41%), Query Frame = 1
Query: 1 ADHTTGLYKSFSAGTIYASQGTARLITELMGVNAERVVGLPMNQPVMVAGFELTLVDANHCPAAVMFLIRDPRPGGRISLHTGDFRADESVCANPMVTALRGRVDTLYLDTTYCAPRHTFPTQ 369
ADH GL + F+ G +Y S T L+ +GV+ + +V LPM PV+V G ++TL+DANHCP AV+FL P G+ LHTGDFRA S +P + L + T+YLDTTYCAP H FP Q
Sbjct: 343 ADHYGGLTRQFNHGPVYCSVVTGNLVARQLGVSEDYIVRLPMETPVVVMGVKVTLIDANHCPGAVLFLFE--LPNGKRYLHTGDFRAHPSHLTHPYLRTLA--IHTIYLDTTYCAPAHRFPPQ 461
BLAST of mRNA_H-elongata_contig76156.15296.1 vs. uniprot
Match: A0A507CJ92_9FUNG (Lactamase_B domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CJ92_9FUNG) HSP 1 Score: 117 bits (294), Expect = 3.240e-28 Identity = 63/128 (49.22%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 1 ADHTTGLYKSFSAGTIYASQGTARLITELMGVNAERVVGLPMNQPVMVAGFELTLVDANHCPAAVMFLIRDPRPGGRIS--LHTGDFRADESVCANPMVTALRGRVDTLYLDTTYCAPRHTFPTQCVV 378
+DH GL K+F+ G IY S+ T+ L+ + V + V LPMN+ V V +TLVDANHCP AV+FL P+ G++S LHTGDFRA ANP++ + R +D LYLDTTYC P H FP Q V
Sbjct: 342 SDHYGGLTKAFTHGIIYCSKVTSNLVVNQLKVPPKYVKALPMNERVQVENVFVTLVDANHCPGAVLFLFEVPQANGKMSTYLHTGDFRASPQHIANPIINSQR--LDLLYLDTTYCKPAHKFPPQDAV 467
BLAST of mRNA_H-elongata_contig76156.15296.1 vs. uniprot
Match: A0A8J9WR85_9CHLO (Probable DNA cross-link repair 1A protein at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WR85_9CHLO) HSP 1 Score: 117 bits (292), Expect = 6.180e-28 Identity = 59/128 (46.09%), Postives = 83/128 (64.84%), Query Frame = 1
Query: 1 ADHTTGLYKSFSAGTIYASQGTARLITELMGVNAERVVGLPMNQPVMVAGFELTLVDANHCPAAVMFLIRDPRPGG-----RISLHTGDFRADESVCANPMVTALRGRVDTLYLDTTYCAPRHTFPTQ 369
+DHT GL SFSAGTIY S+ TA L+ + M +N + LP++ P++V G +TL+DANHCP AV+FL + P P G ++ LHTGD R + +P + + R+D L+LDTTY +P+H FP Q
Sbjct: 38 SDHTIGLSTSFSAGTIYCSKVTANLLVKDMRINPSCIQPLPLDTPLLVDGVHVTLIDANHCPGAVLFLFKTPAPPGSEFPEQVILHTGDMRWHPRMGRHPALA--KQRIDMLFLDTTYASPKHVFPCQ 163 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76156.15296.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig76156.15296.1 >prot_H-elongata_contig76156.15296.1 ID=prot_H-elongata_contig76156.15296.1|Name=mRNA_H-elongata_contig76156.15296.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=126bp ADHTTGLYKSFSAGTIYASQGTARLITELMGVNAERVVGLPMNQPVMVAGback to top mRNA from alignment at H-elongata_contig76156:194..892- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig76156.15296.1 ID=mRNA_H-elongata_contig76156.15296.1|Name=mRNA_H-elongata_contig76156.15296.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=699bp|location=Sequence derived from alignment at H-elongata_contig76156:194..892- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig76156:194..892- >mRNA_H-elongata_contig76156.15296.1 ID=mRNA_H-elongata_contig76156.15296.1|Name=mRNA_H-elongata_contig76156.15296.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=756bp|location=Sequence derived from alignment at H-elongata_contig76156:194..892- (Himanthalia elongata Himel1 dioecious)back to top |