prot_H-elongata_contig7608.15287.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7608.15287.1
Unique Nameprot_H-elongata_contig7608.15287.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
BLAST of mRNA_H-elongata_contig7608.15287.1 vs. uniprot
Match: F0YDV4_AURAN (Ribosomal protein L39 (Fragment) n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YDV4_AURAN)

HSP 1 Score: 95.9 bits (237), Expect = 3.620e-25
Identity = 45/51 (88.24%), Postives = 46/51 (90.20%), Query Frame = 0
Query:    1 QPSHKTFRTKVTLGKKMKQNRPIPHWIRQRTDNKIRYNAKRHHWRRTKLGL 51
            QPSHKTFRTK TL KKMKQNRPIP WIR RTDNKIR+NAKR HWRRTKLGL
Sbjct:    1 QPSHKTFRTKRTLAKKMKQNRPIPQWIRMRTDNKIRWNAKRRHWRRTKLGL 51          
BLAST of mRNA_H-elongata_contig7608.15287.1 vs. uniprot
Match: A0A199VEH0_ANACO (60S ribosomal protein L39 n=45 Tax=cellular organisms TaxID=131567 RepID=A0A199VEH0_ANACO)

HSP 1 Score: 91.3 bits (225), Expect = 2.460e-23
Identity = 41/50 (82.00%), Postives = 43/50 (86.00%), Query Frame = 0
Query:    2 PSHKTFRTKVTLGKKMKQNRPIPHWIRQRTDNKIRYNAKRHHWRRTKLGL 51
            PSHKTFR K+ L KKM+QNRPIPHWIR RTDN IRYNAKR HWRRTKLG 
Sbjct:    2 PSHKTFRIKMKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51          
BLAST of mRNA_H-elongata_contig7608.15287.1 vs. uniprot
Match: A0A218W104_PUNGR (Uncharacterized protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A218W104_PUNGR)

HSP 1 Score: 91.7 bits (226), Expect = 4.210e-23
Identity = 42/51 (82.35%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    1 QPSHKTFRTKVTLGKKMKQNRPIPHWIRQRTDNKIRYNAKRHHWRRTKLGL 51
            QPSHKTFR K  L KKM+QNRPIPHWIR RTDN IRYNAKR HWRRTKLG 
Sbjct:   35 QPSHKTFRIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 85          
BLAST of mRNA_H-elongata_contig7608.15287.1 vs. uniprot
Match: A0A2I0K803_PUNGR (Uncharacterized protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0K803_PUNGR)

HSP 1 Score: 91.7 bits (226), Expect = 4.450e-23
Identity = 42/51 (82.35%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    1 QPSHKTFRTKVTLGKKMKQNRPIPHWIRQRTDNKIRYNAKRHHWRRTKLGL 51
            QPSHKTFR K  L KKM+QNRPIPHWIR RTDN IRYNAKR HWRRTKLG 
Sbjct:   37 QPSHKTFRIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 87          
BLAST of mRNA_H-elongata_contig7608.15287.1 vs. uniprot
Match: A0A7J7Q6B9_9CHLO (60S ribosomal protein L39 n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q6B9_9CHLO)

HSP 1 Score: 90.5 bits (223), Expect = 4.970e-23
Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = 0
Query:    2 PSHKTFRTKVTLGKKMKQNRPIPHWIRQRTDNKIRYNAKRHHWRRTKLGL 51
            PS KTFRTKV L KK KQNRPIPHWIR RT+NKIRYNAKR HWRRTKLG+
Sbjct:    2 PSQKTFRTKVKLAKKAKQNRPIPHWIRFRTNNKIRYNAKRRHWRRTKLGI 51          
BLAST of mRNA_H-elongata_contig7608.15287.1 vs. uniprot
Match: A9PC42_POPTR (Uncharacterized protein n=17 Tax=Mesangiospermae TaxID=1437183 RepID=A9PC42_POPTR)

HSP 1 Score: 90.1 bits (222), Expect = 7.070e-23
Identity = 41/50 (82.00%), Postives = 42/50 (84.00%), Query Frame = 0
Query:    2 PSHKTFRTKVTLGKKMKQNRPIPHWIRQRTDNKIRYNAKRHHWRRTKLGL 51
            PSHKTFR K  L KKM+QNRPIPHWIR RTDN IRYNAKR HWRRTKLG 
Sbjct:    2 PSHKTFRIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51          
BLAST of mRNA_H-elongata_contig7608.15287.1 vs. uniprot
Match: A0A835YZW6_9STRA (Ribosomal protein L39e n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZW6_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.010e-22
Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = 0
Query:    2 PSHKTFRTKVTLGKKMKQNRPIPHWIRQRTDNKIRYNAKRHHWRRTKLGL 51
            PSHKTFRTK TL  K+KQNRPIP+WIR RTDN IRYNAKR HWRRTKLGL
Sbjct:    2 PSHKTFRTKRTLAVKLKQNRPIPNWIRLRTDNTIRYNAKRRHWRRTKLGL 51          
BLAST of mRNA_H-elongata_contig7608.15287.1 vs. uniprot
Match: A0A4S8JP59_MUSBA (Uncharacterized protein n=1 Tax=Musa balbisiana TaxID=52838 RepID=A0A4S8JP59_MUSBA)

HSP 1 Score: 90.1 bits (222), Expect = 1.060e-22
Identity = 41/50 (82.00%), Postives = 42/50 (84.00%), Query Frame = 0
Query:    2 PSHKTFRTKVTLGKKMKQNRPIPHWIRQRTDNKIRYNAKRHHWRRTKLGL 51
            PSHKTFR K  L KKM+QNRPIPHWIR RTDN IRYNAKR HWRRTKLG 
Sbjct:   18 PSHKTFRIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 67          
BLAST of mRNA_H-elongata_contig7608.15287.1 vs. uniprot
Match: A0A822YKQ6_NELNU (Uncharacterized protein n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822YKQ6_NELNU)

HSP 1 Score: 90.5 bits (223), Expect = 1.170e-22
Identity = 41/51 (80.39%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    1 QPSHKTFRTKVTLGKKMKQNRPIPHWIRQRTDNKIRYNAKRHHWRRTKLGL 51
            +PSHKTFR K  L KKM+QNRPIPHWIR RTDN IRYNAKR HWRRTKLG 
Sbjct:   34 EPSHKTFRIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 84          
BLAST of mRNA_H-elongata_contig7608.15287.1 vs. uniprot
Match: A0A0A0LYE1_CUCSA (Uncharacterized protein n=9 Tax=fabids TaxID=91835 RepID=A0A0A0LYE1_CUCSA)

HSP 1 Score: 89.4 bits (220), Expect = 1.430e-22
Identity = 41/50 (82.00%), Postives = 42/50 (84.00%), Query Frame = 0
Query:    2 PSHKTFRTKVTLGKKMKQNRPIPHWIRQRTDNKIRYNAKRHHWRRTKLGL 51
            PSHKTFR K  L KKM+QNRPIPHWIR RTDN IRYNAKR HWRRTKLG 
Sbjct:    2 PSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7608.15287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F0YDV4_AURAN3.620e-2588.24Ribosomal protein L39 (Fragment) n=2 Tax=Pelagomon... [more]
A0A199VEH0_ANACO2.460e-2382.0060S ribosomal protein L39 n=45 Tax=cellular organi... [more]
A0A218W104_PUNGR4.210e-2382.35Uncharacterized protein n=1 Tax=Punica granatum Ta... [more]
A0A2I0K803_PUNGR4.450e-2382.35Uncharacterized protein n=1 Tax=Punica granatum Ta... [more]
A0A7J7Q6B9_9CHLO4.970e-2384.0060S ribosomal protein L39 n=1 Tax=Scenedesmus sp. ... [more]
A9PC42_POPTR7.070e-2382.00Uncharacterized protein n=17 Tax=Mesangiospermae T... [more]
A0A835YZW6_9STRA1.010e-2284.00Ribosomal protein L39e n=1 Tax=Tribonema minus Tax... [more]
A0A4S8JP59_MUSBA1.060e-2282.00Uncharacterized protein n=1 Tax=Musa balbisiana Ta... [more]
A0A822YKQ6_NELNU1.170e-2280.39Uncharacterized protein n=1 Tax=Nelumbo nucifera T... [more]
A0A0A0LYE1_CUCSA1.430e-2282.00Uncharacterized protein n=9 Tax=fabids TaxID=91835... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000077Ribosomal protein L39ePFAMPF00832Ribosomal_L39coord: 9..49
e-value: 6.8E-22
score: 76.8
IPR000077Ribosomal protein L39ePANTHERPTHR19970RIBOSOMAL PROTEIN L39Ecoord: 2..51
IPR023626Ribosomal protein L39e domain superfamilyGENE3D1.10.1620.10coord: 1..51
e-value: 3.1E-29
score: 102.4
IPR023626Ribosomal protein L39e domain superfamilySUPERFAMILY48662Ribosomal protein L39ecoord: 3..50
NoneNo IPR availablePANTHERPTHR19970:SF23coord: 2..51
NoneNo IPR availablePRODOMPD007914coord: 1..37
e-value: 8.0E-10
score: 146.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7608contigH-elongata_contig7608:6230..7234 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7608.15287.1mRNA_H-elongata_contig7608.15287.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7608 6230..7234 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7608.15287.1 ID=prot_H-elongata_contig7608.15287.1|Name=mRNA_H-elongata_contig7608.15287.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
QPSHKTFRTKVTLGKKMKQNRPIPHWIRQRTDNKIRYNAKRHHWRRTKLG
L*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000077Ribosomal_L39
IPR023626Ribosomal_L39e_dom_sf