prot_H-elongata_contig76023.15285.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig76023.15285.1 vs. uniprot
Match: A0A6A3GLU4_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GLU4_9STRA) HSP 1 Score: 111 bits (278), Expect = 3.080e-26 Identity = 69/171 (40.35%), Postives = 103/171 (60.23%), Query Frame = 0
Query: 6 AELGQKFKSKDMGDARYYMGCHITRNHKERELKIDQHLYVESMVEVRRQEGKQG--TGYVGVRAVVRFCENPGPAHKKAVMKIMQYLLHTKDWRITYGGQ-GCELCAKAYTDSDFGACLDTRRSMSDAVLMLAKGAISWYSSMQEVTASGTSKAEYVALSDAVKEVLFLRQ 173
A + +KF+ KDMG AR+ +G I + + R L I Q Y ES+++ QE + T V + RF ENPG H A +K+++YLL TKD I Y G G +L +AY+D+D+ D RRS+S +LML + W S+ Q+ A +++AEY+ALSD VKE +++R+
Sbjct: 46 AGIAEKFRIKDMGRARFILGIEIDYDMERRTLCISQKAYTESIIKKFGQENAKPCLTPLEPVAKLSRFLENPGEKHCDAGIKVVRYLLKTKDVGIVYDGLLGTQL--EAYSDADWAGNQDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECIWMRR 214
BLAST of mRNA_H-elongata_contig76023.15285.1 vs. uniprot
Match: A0A6A3IH57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3IH57_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.880e-24 Identity = 66/171 (38.60%), Postives = 102/171 (59.65%), Query Frame = 0
Query: 6 AELGQKFKSKDMGDARYYMGCHITRNHKERELKIDQHLYVESMVEVRRQEGKQG--TGYVGVRAVVRFCENPGPAHKKAVMKIMQYLLHTKDWRITYGGQ-GCELCAKAYTDSDFGACLDTRRSMSDAVLMLAKGAISWYSSMQEVTASGTSKAEYVALSDAVKEVLFLRQ 173
A + +KF+ K++ AR+ +G I + + R L I Q Y ES+++ QE + T V + RF ENPG H A +K+++YLL TKD I Y G G +L +AY+D+D+ D RRS+S +LML + W S+ Q+ A +++AEY+ALSD VKE +++R+
Sbjct: 16 AGIAEKFRIKNLERARFILGIEIDYDMERRTLGISQKSYTESIIKKFGQENAKPCLTPLEPVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQL--EAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRR 184
BLAST of mRNA_H-elongata_contig76023.15285.1 vs. uniprot
Match: A0A2P4X8N7_9STRA (Mitochondrial protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X8N7_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.900e-24 Identity = 64/169 (37.87%), Postives = 101/169 (59.76%), Query Frame = 0
Query: 6 AELGQKFKSKDMGDARYYMGCHITRNHKERELKIDQHLYVESMVEVRRQEGKQGTGYVGVRAVVRFCENPGPAHKKAVMKIMQYLLHTKDWRITYGGQ-GCELCAKAYTDSDFGACLDTRRSMSDAVLMLAKGAISWYSSMQEVTASGTSKAEYVALSDAVKEVLFLRQ 173
A + +KF+ KD+G AR+ +G I + + + L I Q Y ES++ R G + V + R+ ENP H A +K+++YL TKD ITY G+ G EL A Y+D+D+ D RRS+S +LM+ + W S+ Q+ A +++AEY+ALSD +KEV+++R+
Sbjct: 101 AGIAEKFRIKDLGRARFILGIEIDYDMERKALTISQRAYTESIINRTRP----GIAFA-VAKLSRYLENPDHRHWDAGIKVVRYLTKTKDAAITYNGRMGTELTA--YSDADWAGNRDNRRSVSGVMLMMCGAPVVWISTFQKTVALSSTEAEYMALSDCIKEVVWMRR 262
BLAST of mRNA_H-elongata_contig76023.15285.1 vs. uniprot
Match: A0A6A3HBH2_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3HBH2_9STRA) HSP 1 Score: 104 bits (260), Expect = 2.170e-23 Identity = 66/165 (40.00%), Postives = 96/165 (58.18%), Query Frame = 0
Query: 6 AELGQKFKSKDMGDARYYMGCHITRNHKERELKIDQHLYVESMVEVRRQEGKQG--TGYVGVRAVVRFCENPGPAHKKAVMKIMQYLLHTKDWRITYGGQ-GCELCAKAYTDSDFGACLDTRRSMSDAVLMLAKGAISWYSSMQEVTASGTSKAEYVALSDAVKE 167
A + +K++ KDMG A + +G I + + R L I Q Y ES+ + QE + T V + RF ENPG H A +K+++YLL TKD I Y G G +L +AY+D+D+ D RRS+S VLML + W S+ Q+ A +++AEY+ALSD VK+
Sbjct: 95 AGIAEKYRIKDMGRAHFILGIEIDYDMERRTLGISQKAYTESITKKFGQENAKPCLTPLEPVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVDIVYDGLLGTQL--EAYSDADWAGNRDDRRSVSGVVLMLCGAPVVWLSTFQKTVALSSTEAEYMALSDCVKD 257
BLAST of mRNA_H-elongata_contig76023.15285.1 vs. uniprot
Match: A0A6G0MKR4_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MKR4_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.040e-20 Identity = 68/189 (35.98%), Postives = 102/189 (53.97%), Query Frame = 0
Query: 6 AELGQKFKSKDMGDARYYMGCHITRNHKERELKIDQHLYVESMVEVRRQE-----------GKQGT---------GYVGVRAVVRFCENPGPAHKKAVMKIMQYLLHTKDWRITYGGQ-GCELCAKAYTDSDFGACLDTRRSMSDAVLMLAKGAISWYSSMQEVTASGTSKAEYVALSDAVKEVLFLRQ 173
A + +KF+ KD+G AR+ +G I + K R L I Q Y+ES+ + QE G Q T V++ NPG H A +K+++YLL TKD I Y G G +L +AY+D+D+ D RRS+S +LML + W S+ Q+ A +++AEY+ALSD VKE +++R+
Sbjct: 72 AGIAEKFQIKDLGRARFILGIEIDYDMKRRTLGISQKAYIESITKKFGQENAKPCLTPLEPGVQLTKADEPQTEEDKAKVKSKSYRSLNPGEKHWDAGIKVVRYLLKTKDVDIVYDGLLGTQL--EAYSDADWAGNRDDRRSVSGVLLMLCGAPVVWLSTFQKTVALSSTEAEYMALSDCVKECVWMRR 258
BLAST of mRNA_H-elongata_contig76023.15285.1 vs. uniprot
Match: A0A2N9FS65_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FS65_FAGSY) HSP 1 Score: 99.4 bits (246), Expect = 1.190e-20 Identity = 61/169 (36.09%), Postives = 93/169 (55.03%), Query Frame = 0
Query: 8 LGQKFKSKDMGDARYYMGCHITRNHKERELKIDQHLYVESMVEVRRQEGKQGTGYVGVRAVVRFCENPGPAHKKAVMKIMQYLLHTKDWRITYGGQGCELCAKAYTDSDFGACLDTRRSMSDAVLMLAKGAISWYSSMQEVTASGTSKAEYVALSDAVKEVLFLRQAQQ 176
L F+ KDMG+A + +G ITR+ ++ L + Q Y++ ++E V V R+ NPGPAH +AV +I++YL T D + Y G +L Y+D+D+ + D R+S S +L GA+SW S Q A T ++EYVA S AV+E ++LR+ Q
Sbjct: 901 LSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILEHI---------CFAVGMVSRYQSNPGPAHWRAVKRILRYLRGTSDHALCY--HGGDLRLTGYSDADWASDKDERKSTSGYAFILGGGAVSWCSKKQSCIALSTMESEYVACSAAVQEAVWLRRFLQ 1058
BLAST of mRNA_H-elongata_contig76023.15285.1 vs. uniprot
Match: A0A438IQ82_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438IQ82_VITVI) HSP 1 Score: 99.0 bits (245), Expect = 1.630e-20 Identity = 66/186 (35.48%), Postives = 94/186 (50.54%), Query Frame = 0
Query: 8 LGQKFKSKDMGDARYYMGCHITRNHKERELKIDQHLYVESMVE-VRRQEGKQGTGYV--------------------GVRAVVRFCENPGPAHKKAVMKIMQYLLHTKDWRITYGGQGCELCAKAYTDSDFGACLDTRRSMSDAVLMLAKGAISWYSSMQEVTASGTSKAEYVALSDAVKEVLFLR 172
L + F DMG+A Y +G I R+ L + Q Y++ ++E Q G + V + R+ +PG H KA K+M+YL TKD+ +TY + +L Y+DSD+G CLD+ +S S V MLA GAISW S Q +TAS T +AE+VA +A L+LR
Sbjct: 905 LSKNFHMVDMGEANYVIGIEIFRDRSRGVLGLSQKGYIDRVLERFNMQSCSSGIAPILKAVGSLMYAQTCTRPDISFAVGMLGRYQSDPGFEHWKAAKKVMRYLQGTKDYMLTYK-RSEQLEVVGYSDSDYGGCLDSLKSTSGFVFMLANGAISWKSEKQSITASSTMEAEFVACFEASSHALWLR 1089
BLAST of mRNA_H-elongata_contig76023.15285.1 vs. uniprot
Match: A0A2N9HBS2_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HBS2_FAGSY) HSP 1 Score: 98.6 bits (244), Expect = 2.160e-20 Identity = 61/179 (34.08%), Postives = 97/179 (54.19%), Query Frame = 0
Query: 8 LGQKFKSKDMGDARYYMGCHITRNHKERELKIDQHLYVESMV------EVRRQEGKQGTGYVGVRAVVRFCENPGPAHKKAVMKIMQYLLHTKDWRITYGGQGCELCAKAYTDSDFGACLDTRRSMSDAVLMLAKGAISWYSSMQEVTASGTSKAEYVALSDAVKEVLFLRQAQQFMEL 180
L F+ KDM A + +G I R+ + L + Q Y+ ++ + + + G G + V RF NPGPAH KAV +I++YL T D+ + Y QG +L + Y+D+D+ LD R+S S +L GAI+W S Q A +++YVA S AV+E ++LR+ Q +++
Sbjct: 751 LSSTFEMKDMDKASFMLGVKILRDRSRKLLGLSQETYIRKVLKRFHIQDCKPIDTPVGKGDSLIGLVSRFQSNPGPAHWKAVKRILRYLRGTADYILCY--QGRDLRLRGYSDADWAGDLDERKSTSSYTFLLGGGAITWCSKKQSCVALSMMESKYVACSAAVQEAVWLRRFLQRLDI 927
BLAST of mRNA_H-elongata_contig76023.15285.1 vs. uniprot
Match: A0A6A3GHT8_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GHT8_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.600e-20 Identity = 67/189 (35.45%), Postives = 100/189 (52.91%), Query Frame = 0
Query: 6 AELGQKFKSKDMGDARYYMGCHITRNHKERELKIDQHLYVESMVEVRRQEGKQGT------GYVGVRAVVRFCE--------------NPGPAHKKAVMKIMQYLLHTKDWRITYGGQ-GCELCAKAYTDSDFGACLDTRRSMSDAVLMLAKGAISWYSSMQEVTASGTSKAEYVALSDAVKEVLFLRQ 173
A + +K++ KDMG AR+ +G I + + R L I Q Y ES+ + QE + G +A E NPG H A +K+++YLL TKD I Y G G +L +AY+D+D+ D RRS+S VLML + W S+ Q+ A +++AEY+ALSD VKE +++R+
Sbjct: 16 AGIAEKYRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESITKKFGQENAKPCLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLNPGEKHWDAGIKVVRYLLKTKDVDIVYDGLLGTQL--EAYSDADWAGNRDDRRSVSGVVLMLCGAPVVWLSTFQKTVALSSTEAEYMALSDCVKECVWMRR 202
BLAST of mRNA_H-elongata_contig76023.15285.1 vs. uniprot
Match: A0A6H5JHS1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHS1_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 4.400e-20 Identity = 67/188 (35.64%), Postives = 95/188 (50.53%), Query Frame = 0
Query: 2 DRFAAELGQKFKSKDMGDARYYMGCHITRNHKERELKIDQHLYVESMVEVRRQEGKQGTGYVG----------VRAVVRFCENPGPAHKKAVMKIMQYLLHTKDWRITYGGQGCE-LCAKAYTDSDFGACLDTRRSMSDAVLMLAKGAISWYSSMQEVTASGTSKAEYVALSDAVKEVLFLRQAQQFM 178
D+F A+L + K++GD R Y GC RN KE E + + VE + +E ++ VRAV R+C +P H KA M + Y T + I+ E + Y D+DF + RRS+S ++ GA+SWYS Q+ A T++AEYVAL D VKE+LF RQ +FM
Sbjct: 283 DKFGADLNKSVPVKNLGDLRCYSGCFYERN-KETEYGV---VGVEVATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWKAAMDTLGYARRTSHFGISVQRGTVEGFTLEGYADADFASKAADRRSVSGGIVTCGGGAVSWYSIAQKCVALSTTEAEYVALGDVVKEILFSRQIWRFM 466 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig76023.15285.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig76023.15285.1 ID=prot_H-elongata_contig76023.15285.1|Name=mRNA_H-elongata_contig76023.15285.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=199bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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