prot_H-elongata_contig75904.15278.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75904.15278.1
Unique Nameprot_H-elongata_contig75904.15278.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length120
Homology
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BLAST of mRNA_H-elongata_contig75904.15278.1 vs. uniprot
Match: A0A6H5K002_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K002_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 9.220e-23
Identity = 50/72 (69.44%), Postives = 62/72 (86.11%), Query Frame = 0 
Query:    4 MEDLESQVFNLKLSIQEYEDRLAKLYQTEDRSKWKGPAVLLDDLQAADRDIERLEDTVEDLQHQLEKASGGG 75
            M+ + S+VFNLKL++QEYEDRLAKLYQTEDRSKW+GPA LL DL+AADR+++RLE+TV  L+ QL   SGGG
Sbjct:   21 MDAMGSEVFNLKLAVQEYEDRLAKLYQTEDRSKWRGPATLLTDLEAADREVDRLENTVSKLRDQLHGVSGGG 92
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BLAST of mRNA_H-elongata_contig75904.15278.1 vs. uniprot
Match: D8LIY9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY9_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 1.500e-21
Identity = 48/72 (66.67%), Postives = 61/72 (84.72%), Query Frame = 0 
Query:    4 MEDLESQVFNLKLSIQEYEDRLAKLYQTEDRSKWKGPAVLLDDLQAADRDIERLEDTVEDLQHQLEKASGGG 75
            M+ + S+VFNLKL++QEYEDRLAKLYQTEDRSKW+GPA LL DL+AAD++++RLE+TV  L+ QL    GGG
Sbjct:   21 MDAMGSEVFNLKLAVQEYEDRLAKLYQTEDRSKWRGPATLLTDLEAADQEVDRLENTVSKLRDQLHGVRGGG 92
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75904.15278.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K002_9PHAE9.220e-2369.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIY9_ECTSI1.500e-2166.67Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..24
NoneNo IPR availableCOILSCoilCoilcoord: 47..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75904contigH-elongata_contig75904:247..1268 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75904.15278.1mRNA_H-elongata_contig75904.15278.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75904 165..1268 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75904.15278.1 ID=prot_H-elongata_contig75904.15278.1|Name=mRNA_H-elongata_contig75904.15278.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=120bp
MEVMEDLESQVFNLKLSIQEYEDRLAKLYQTEDRSKWKGPAVLLDDLQAA
DRDIERLEDTVEDLQHQLEKASGGGSGSGDGGKGVSGDGDGGGSGEENNR
DSGDDGDQHGRYEVNELRSQ
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