prot_H-elongata_contig75891.15275.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig75891.15275.1
Unique Nameprot_H-elongata_contig75891.15275.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length70
Homology
BLAST of mRNA_H-elongata_contig75891.15275.1 vs. uniprot
Match: D7G2G8_ECTSI (Glucose-methanol-choline oxidoreductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2G8_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 2.270e-18
Identity = 42/69 (60.87%), Postives = 54/69 (78.26%), Query Frame = 0
Query:    1 MVLTTVKSRGTVRLAS-RDPSCPPVINPAYFSHPDDEKAVATGWRTLWQAKTETATGKAVLGYELSPGK 68
            M++T+VKS+GTVRLAS  D + PPVI+P YFSHP D +A+   WRT+ +AK ET TG+AV G+EL PGK
Sbjct:  451 MLVTSVKSKGTVRLASGTDAAAPPVIDPGYFSHPQDRRAMLECWRTIRRAKRETTTGRAVFGFELLPGK 519          
BLAST of mRNA_H-elongata_contig75891.15275.1 vs. uniprot
Match: UPI0018422DBC (FAD-dependent oxidoreductase n=1 Tax=Catenulispora sp. TaxID=1962977 RepID=UPI0018422DBC)

HSP 1 Score: 56.6 bits (135), Expect = 1.150e-7
Identity = 30/61 (49.18%), Postives = 39/61 (63.93%), Query Frame = 0
Query:    7 KSRGTVRLASRDPSCPPVINPAYFSHPDDEKAVATGWRTLWQAKTETATGKAVLGYELSPG 67
            KSRGT+RLAS DP+  P+I+PAY S P D + +  G   + +A    + GK VLG E SPG
Sbjct:  398 KSRGTLRLASTDPTAAPLIDPAYLSDPADARLLLDGMELVREAMAHRSLGKRVLG-ETSPG 457          
BLAST of mRNA_H-elongata_contig75891.15275.1 vs. uniprot
Match: A0A4T0V2W4_9ACTN (Choline dehydrogenase n=2 Tax=Nocardioides TaxID=1839 RepID=A0A4T0V2W4_9ACTN)

HSP 1 Score: 53.1 bits (126), Expect = 1.930e-6
Identity = 28/63 (44.44%), Postives = 38/63 (60.32%), Query Frame = 0
Query:    7 KSRGTVRLASRDPSCPPVINPAYFSHPDDEKAVATGWRTLWQAKTETATGKAVLGYELSPGKG 69
            KSRGT+RLAS DP+  P+I+  YF+HPDD + +A G   + +     A G  V   E+ PG G
Sbjct:  406 KSRGTIRLASSDPTVAPLIDYGYFTHPDDVEVLAQGTEMIREIMAGAAFGGGVKA-EIHPGPG 467          
BLAST of mRNA_H-elongata_contig75891.15275.1 vs. uniprot
Match: A0A4D4JEL6_9PSEU (Choline dehydrogenase n=2 Tax=Gandjariella thermophila TaxID=1931992 RepID=A0A4D4JEL6_9PSEU)

HSP 1 Score: 52.4 bits (124), Expect = 3.610e-6
Identity = 30/69 (43.48%), Postives = 41/69 (59.42%), Query Frame = 0
Query:    2 VLTTV---KSRGTVRLASRDPSCPPVINPAYFSHPDDEKAVATGWRTLWQAKTETATGKAVLGYELSPG 67
            V+TT+   KSRGTVRLAS DP+  P+I+PAY + PDD + +  G + + +          V G EL PG
Sbjct:  384 VMTTLIYPKSRGTVRLASADPTAAPLIDPAYLADPDDARFLIDGMKVVREVMASRRLAGVVTG-ELHPG 451          
BLAST of mRNA_H-elongata_contig75891.15275.1 vs. uniprot
Match: A0A4R4S2X4_9ACTN (FAD-dependent oxidoreductase n=3 Tax=unclassified Actinomadura TaxID=2626254 RepID=A0A4R4S2X4_9ACTN)

HSP 1 Score: 52.0 bits (123), Expect = 4.930e-6
Identity = 29/61 (47.54%), Postives = 34/61 (55.74%), Query Frame = 0
Query:    7 KSRGTVRLASRDPSCPPVINPAYFSHPDDEKAVATGWRTLWQAKTETATGKAVLGYELSPG 67
            KSRGTVRLAS DPS  PVI+P Y   PDD + +  G   + +          V G ELSPG
Sbjct:  392 KSRGTVRLASADPSAAPVIDPGYLGEPDDARLLLDGIELVREIMANKIISGGV-GAELSPG 451          
BLAST of mRNA_H-elongata_contig75891.15275.1 vs. uniprot
Match: UPI001C63A794 (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=Nocardioides panacisoli TaxID=627624 RepID=UPI001C63A794)

HSP 1 Score: 52.0 bits (123), Expect = 4.940e-6
Identity = 27/61 (44.26%), Postives = 37/61 (60.66%), Query Frame = 0
Query:    7 KSRGTVRLASRDPSCPPVINPAYFSHPDDEKAVATGWRTLWQAKTETATGKAVLGYELSPG 67
            KSRGT+RLAS DP+  P+I+  YF+HPDD + +A G   + +     A G  V   E+ PG
Sbjct:  409 KSRGTIRLASADPTAAPLIDYGYFTHPDDVEVLAEGTEMIREIMAGAAFGGGVRA-EIHPG 468          
BLAST of mRNA_H-elongata_contig75891.15275.1 vs. uniprot
Match: W9CDP2_SCLBF (Uncharacterized protein n=1 Tax=Sclerotinia borealis (strain F-4128) TaxID=1432307 RepID=W9CDP2_SCLBF)

HSP 1 Score: 51.6 bits (122), Expect = 6.760e-6
Identity = 26/56 (46.43%), Postives = 36/56 (64.29%), Query Frame = 0
Query:    8 SRGTVRLASRDPSCPPVINPAYFSHPDDEKAVATGWRTLWQAKTETATGKAVLGYE 63
            SRG+V+LAS DP+  PVI+P YFS   D   + TG R + +A   TA G+A++  E
Sbjct:  404 SRGSVKLASTDPTAAPVIDPNYFSTEADRYVLRTGLRKIMEAMLSTAEGQALIETE 459          
BLAST of mRNA_H-elongata_contig75891.15275.1 vs. uniprot
Match: UPI00144A4F1E (GMC oxidoreductase n=1 Tax=Macroventuria anomochaeta TaxID=301207 RepID=UPI00144A4F1E)

HSP 1 Score: 51.6 bits (122), Expect = 6.760e-6
Identity = 26/59 (44.07%), Postives = 37/59 (62.71%), Query Frame = 0
Query:    8 SRGTVRLASRDPSCPPVINPAYFSHPDDEKAVATGWRTLWQAKTETATGKAVLGYELSP 66
            SRG+V LAS DPS  P+I+P+Y++   D   + TG+RT  Q    TA GK ++  E +P
Sbjct:  401 SRGSVTLASSDPSANPIIDPSYYATEADRHVMRTGFRTQSQLMFSTAEGKELVEREHTP 459          
BLAST of mRNA_H-elongata_contig75891.15275.1 vs. uniprot
Match: UPI001886B4E9 (L-sorbose 1-dehydrogenase-like n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=UPI001886B4E9)

HSP 1 Score: 51.6 bits (122), Expect = 6.790e-6
Identity = 23/41 (56.10%), Postives = 29/41 (70.73%), Query Frame = 0
Query:    2 VLTTVKSRGTVRLASRDPSCPPVINPAYFSHPDDEKAVATG 42
            +L  +KSRG VRL + DP  PP+I+P YFSHP+D K  A G
Sbjct:  447 ILNRLKSRGYVRLRTTDPDDPPIIDPRYFSHPEDIKVAAEG 487          
BLAST of mRNA_H-elongata_contig75891.15275.1 vs. uniprot
Match: A0A857JJU0_9ALTE (Alcohol dehydrogenase (Acceptor) n=1 Tax=Paraglaciecola mesophila TaxID=197222 RepID=A0A857JJU0_9ALTE)

HSP 1 Score: 51.2 bits (121), Expect = 9.240e-6
Identity = 28/63 (44.44%), Postives = 38/63 (60.32%), Query Frame = 0
Query:    7 KSRGTVRLASRDPSCPPVINPAYFSHPDDEKAVATGWRTLWQAKTETATGKAVLGYELSPGKG 69
            KSRGT+ LAS DP+ P +I+P Y SHPDD+K +  G R   +A  ++       G E+ PG G
Sbjct:  392 KSRGTITLASADPTQPAIIDPQYLSHPDDQKVMIDGIRK-GRAILQSQGFAQYQGEEVLPGAG 453          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig75891.15275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2G8_ECTSI2.270e-1860.87Glucose-methanol-choline oxidoreductase n=2 Tax=Ec... [more]
UPI0018422DBC1.150e-749.18FAD-dependent oxidoreductase n=1 Tax=Catenulispora... [more]
A0A4T0V2W4_9ACTN1.930e-644.44Choline dehydrogenase n=2 Tax=Nocardioides TaxID=1... [more]
A0A4D4JEL6_9PSEU3.610e-643.48Choline dehydrogenase n=2 Tax=Gandjariella thermop... [more]
A0A4R4S2X4_9ACTN4.930e-647.54FAD-dependent oxidoreductase n=3 Tax=unclassified ... [more]
UPI001C63A7944.940e-644.26GMC family oxidoreductase N-terminal domain-contai... [more]
W9CDP2_SCLBF6.760e-646.43Uncharacterized protein n=1 Tax=Sclerotinia boreal... [more]
UPI00144A4F1E6.760e-644.07GMC oxidoreductase n=1 Tax=Macroventuria anomochae... [more]
UPI001886B4E96.790e-656.10L-sorbose 1-dehydrogenase-like n=1 Tax=Rhipicephal... [more]
A0A857JJU0_9ALTE9.240e-644.44Alcohol dehydrogenase (Acceptor) n=1 Tax=Paraglaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.560.10coord: 1..69
e-value: 1.0E-13
score: 53.3
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 6..68
IPR007867Glucose-methanol-choline oxidoreductase, C-terminalPFAMPF05199GMC_oxred_Ccoord: 7..52
e-value: 4.8E-8
score: 33.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig75891contigH-elongata_contig75891:307..516 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig75891.15275.1mRNA_H-elongata_contig75891.15275.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig75891 304..516 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig75891.15275.1 ID=prot_H-elongata_contig75891.15275.1|Name=mRNA_H-elongata_contig75891.15275.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp
MVLTTVKSRGTVRLASRDPSCPPVINPAYFSHPDDEKAVATGWRTLWQAK
TETATGKAVLGYELSPGKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007867GMC_OxRtase_C